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The map label for this gene is whiA

Identifier: 41407247

GI number: 41407247

Start: 1204229

End: 1205206

Strand: Direct

Name: whiA

Synonym: MAP1149

Alternate gene names: 41407247

Gene position: 1204229-1205206 (Clockwise)

Preceding gene: 41407246

Following gene: 41407250

Centisome position: 24.93

GC content: 73.21

Gene sequence:

>978_bases
ATGACGACCGAAGTCAAGGACGAACTGAGCCGCCTGGTCGTGAAATCGGTCAGTGCGCGCCGGGCGGAGGTCACGTCCCT
GCTGCGGTTCGCCGGCGGCCTACACATCGTCGGCGGTCGCGTCGTGGTCGAGGCCGAGGTGGATCTGGGCAACGTGGCGC
GGCGGCTGCGCAAGGACATTTTCGAGCTCTACGGCTACAACGCGGTCGTGCATGTGTTGTCCGCCAGCGGGATTCGCAAG
AGCACCCGGTACGTGCTGCGGGTGGCAAACGACGGTGAGGCGCTGGCCCGCCAGACCGGCCTGTTGGACAACCGGGGCCG
CCCGGTGCGCGGGCTGCCCGCCCAGGTGGTGGGCGGCAGCATCGCCGACGCCGAAGCCGCCTGGCGCGGAGCGTTCTTGG
CGCACGGGTCGCTGACCGAGCCGGGCCGCTCGTCGGCGCTGGAGGTCAGCTGCCCCGGGCCGGAGGCCGCGCTGGCGTTG
GTGGGCGCGGCGCGCCGGCTGGGGGTCAGTGCCAAGGCCCGCGAGGTGCGCGGCGCCGACCGGGTGGTGGTGCGCGACGG
CGAGGCGATCGGCGCGCTGCTGACGCGGATGGGCGCCCAGGACACCCGGCTCATCTGGGAGGAGCGCCGGATGCGGCGCG
AGGTGCGCGCGACGGCCAACCGGTTGGCCAACTTCGACGACGCCAACCTGCGCCGCTCGGCGCGGGCGGCGGTGGCGGCG
GCGGCCCGGGTGGAGCGGGCGCTGGAGATCCTCGGCGACACCGTGCCCGACCATCTGGCCTCGGCCGGCAAGCTGCGCGT
CGAGCACCGGCAGGCCTCGCTGGAGGAGCTGGGCCGCCTCGCCGACCCGCCGATGACGAAAGACGCTGTGGCGGGCCGTA
TTCGGCGGTTATTGTCGATGGCCGACCGCAAGGCCAAGATCGAGGGCATTCCCGACACCGAGTCGGCGGTGACGCCGGAC
CTGCTCGAGGACGCCTAG

Upstream 100 bases:

>100_bases
CGGTCACGGCCACCGCGGATATTCGGGTTGACGGTGCAAGCCCACCGGCAGGTGGCAACGGACCGGCCGGCAGCGGACCA
AGGGGTGACGACGCGTGGCG

Downstream 100 bases:

>100_bases
CGCGGTGGCGATGCGCGCCGACGGCGCGTCGTCGCGCTGGCAAAGCCCGGAGCGCGGCGCGGAGTCGTGGGGCGCCCTCG
CTCGCGGCGCCCGATTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTTEVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAEVDLGNVARRLRKDIFELYGYNAVVHVLSASGIRK
STRYVLRVANDGEALARQTGLLDNRGRPVRGLPAQVVGGSIADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALAL
VGAARRLGVSAKAREVRGADRVVVRDGEAIGALLTRMGAQDTRLIWEERRMRREVRATANRLANFDDANLRRSARAAVAA
AARVERALEILGDTVPDHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSMADRKAKIEGIPDTESAVTPD
LLEDA

Sequences:

>Translated_325_residues
MTTEVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAEVDLGNVARRLRKDIFELYGYNAVVHVLSASGIRK
STRYVLRVANDGEALARQTGLLDNRGRPVRGLPAQVVGGSIADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALAL
VGAARRLGVSAKAREVRGADRVVVRDGEAIGALLTRMGAQDTRLIWEERRMRREVRATANRLANFDDANLRRSARAAVAA
AARVERALEILGDTVPDHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSMADRKAKIEGIPDTESAVTPD
LLEDA
>Mature_324_residues
TTEVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAEVDLGNVARRLRKDIFELYGYNAVVHVLSASGIRKS
TRYVLRVANDGEALARQTGLLDNRGRPVRGLPAQVVGGSIADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALV
GAARRLGVSAKAREVRGADRVVVRDGEAIGALLTRMGAQDTRLIWEERRMRREVRATANRLANFDDANLRRSARAAVAAA
ARVERALEILGDTVPDHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSMADRKAKIEGIPDTESAVTPDL
LEDA

Specific function: May be required for sporulation

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WHIA_MYCA1 (A0QI01)

Other databases:

- EMBL:   CP000479
- RefSeq:   YP_882539.1
- STRING:   A0QI01
- EnsemblBacteria:   EBMYCT00000010233
- GeneID:   4526358
- GenomeReviews:   CP000479_GR
- KEGG:   mav:MAV_3357
- TIGR:   MAV_3357
- eggNOG:   COG1481
- GeneTree:   EBGT00050000017698
- HOGENOM:   HBG322392
- ProtClustDB:   CLSK871931
- BioCyc:   MAVI243243:MAV_3357-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_01420
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N

EC number: NA

Molecular weight: Translated: 34932; Mature: 34801

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAEVDLGNVARRLRKDI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEECCCHHHHHHHHHHHH
FELYGYNAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDNRGRPVRGLPAQVVGGS
HHHHCHHHHHHHHHHCCCHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCC
IADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGAD
CHHHHHHHHHHHEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHCCCC
RVVVRDGEAIGALLTRMGAQDTRLIWEERRMRREVRATANRLANFDDANLRRSARAAVAA
EEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AARVERALEILGDTVPDHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM
HHHHHHHHHHHHCCCHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ADRKAKIEGIPDTESAVTPDLLEDA
HHHHHHCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
TTEVKDELSRLVVKSVSARRAEVTSLLRFAGGLHIVGGRVVVEAEVDLGNVARRLRKDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEECCCHHHHHHHHHHHH
FELYGYNAVVHVLSASGIRKSTRYVLRVANDGEALARQTGLLDNRGRPVRGLPAQVVGGS
HHHHCHHHHHHHHHHCCCHHCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCC
IADAEAAWRGAFLAHGSLTEPGRSSALEVSCPGPEAALALVGAARRLGVSAKAREVRGAD
CHHHHHHHHHHHEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHCCCC
RVVVRDGEAIGALLTRMGAQDTRLIWEERRMRREVRATANRLANFDDANLRRSARAAVAA
EEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AARVERALEILGDTVPDHLASAGKLRVEHRQASLEELGRLADPPMTKDAVAGRIRRLLSM
HHHHHHHHHHHHCCCHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ADRKAKIEGIPDTESAVTPDLLEDA
HHHHHHCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA