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The map label for this gene is pyrF

Identifier: 41407218

GI number: 41407218

Start: 1174477

End: 1175301

Strand: Direct

Name: pyrF

Synonym: MAP1120

Alternate gene names: 41407218

Gene position: 1174477-1175301 (Clockwise)

Preceding gene: 41407217

Following gene: 41407220

Centisome position: 24.32

GC content: 77.33

Gene sequence:

>825_bases
GTGACCGGGTTCGGCGCCCGGCTGGCCGCCGCGAAAGCGCAACGCGGGCCGCTGTGCGTGGGCATCGACCCACACCCCGA
GCTGCTGCGCGCGTGGGACCTGCCGACCACCGCCGACGGGCTGGCCGCCTTCTGCGACATCTGCGTCGAGGCGTTCGCCG
GATTCGCGGTCGTCAAGCCGCAGGTGGCGTTCTTCGAGGCCTACGGCGCGGCCGGATTCGCGGTGCTCGAACGCACCATC
GCCGCGCTGCGGTCGGCCGGGGTGCTGGTGCTGGCCGACGCCAAGCGCGGCGACATCGGCACCACCATGGCCGCCTACGC
CGCCGCCTGGGCCGGTGACTCGCCGCTGGCCGCCGACGCGGTGACGGCCTCGCCCTACCTGGGGTTCGGCTCGCTGCGGC
CGCTGCTGGAAGCCGCCGCCGCGCACGACCGCGGGGTGTTCGTGCTGGCGGCCACCTCCAACCCGGAGGGCGCCACCGTG
CAGCGGGCCGCCTTCGACGGCCGCACGGTGGCCCAGCTGGTGGTCGACCAGGCGGCGGTGGTGAATCGGTCGACGAACCC
GGCCGGGCCCGGCTACGTCGGCGTCGTGGTGGGGGCGACGGTGCTGCAGCCGCCCGATCTGAGCGCGCTGGGCGGCCCGG
TGCTGGTGCCCGGGCTCGGCGTGCAGGGCGGGCGGCCCGAGGCGCTGGCCGGGCTGGGCGGGGCGGAACCCGGGCAGCTG
CTGCCCGCGGTGGCCCGCGAGGTGCTGCGGGCCGGCCCCGACGTGGCGGAGCTGCGCGCGGCGGCCGACCGGATGCTGGA
CGCCGTCGCCTACCTGGACGCGTAG

Upstream 100 bases:

>100_bases
CGGCCGCCGTGCAGGGCATCGAAGCCGGCATCCGCGGCGACATCGGGGTGCGCAGCCTGCAGGAACTGCACAGCCAGATC
GCCTCGGACAAGGGGCCGCG

Downstream 100 bases:

>100_bases
CGGCCTCAGTCCGACGCGACGGTCGTGCTGGGCCGGGCGGTTTCCACGATGACGGTGGTGGCCTTGACGACGGCCACCGC
GACGCTGCCGGGGCGCAGCT

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTGFGARLAAAKAQRGPLCVGIDPHPELLRAWDLPTTADGLAAFCDICVEAFAGFAVVKPQVAFFEAYGAAGFAVLERTI
AALRSAGVLVLADAKRGDIGTTMAAYAAAWAGDSPLAADAVTASPYLGFGSLRPLLEAAAAHDRGVFVLAATSNPEGATV
QRAAFDGRTVAQLVVDQAAVVNRSTNPAGPGYVGVVVGATVLQPPDLSALGGPVLVPGLGVQGGRPEALAGLGGAEPGQL
LPAVAREVLRAGPDVAELRAAADRMLDAVAYLDA

Sequences:

>Translated_274_residues
MTGFGARLAAAKAQRGPLCVGIDPHPELLRAWDLPTTADGLAAFCDICVEAFAGFAVVKPQVAFFEAYGAAGFAVLERTI
AALRSAGVLVLADAKRGDIGTTMAAYAAAWAGDSPLAADAVTASPYLGFGSLRPLLEAAAAHDRGVFVLAATSNPEGATV
QRAAFDGRTVAQLVVDQAAVVNRSTNPAGPGYVGVVVGATVLQPPDLSALGGPVLVPGLGVQGGRPEALAGLGGAEPGQL
LPAVAREVLRAGPDVAELRAAADRMLDAVAYLDA
>Mature_273_residues
TGFGARLAAAKAQRGPLCVGIDPHPELLRAWDLPTTADGLAAFCDICVEAFAGFAVVKPQVAFFEAYGAAGFAVLERTIA
ALRSAGVLVLADAKRGDIGTTMAAYAAAWAGDSPLAADAVTASPYLGFGSLRPLLEAAAAHDRGVFVLAATSNPEGATVQ
RAAFDGRTVAQLVVDQAAVVNRSTNPAGPGYVGVVVGATVLQPPDLSALGGPVLVPGLGVQGGRPEALAGLGGAEPGQLL
PAVAREVLRAGPDVAELRAAADRMLDAVAYLDA

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR018089
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 27520; Mature: 27388

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00156 OMPDECASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGFGARLAAAKAQRGPLCVGIDPHPELLRAWDLPTTADGLAAFCDICVEAFAGFAVVKP
CCCCHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
QVAFFEAYGAAGFAVLERTIAALRSAGVLVLADAKRGDIGTTMAAYAAAWAGDSPLAADA
HHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHH
VTASPYLGFGSLRPLLEAAAAHDRGVFVLAATSNPEGATVQRAAFDGRTVAQLVVDQAAV
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEHHHCCCHHHHHHHHHHHHH
VNRSTNPAGPGYVGVVVGATVLQPPDLSALGGPVLVPGLGVQGGRPEALAGLGGAEPGQL
HCCCCCCCCCCEEEHHHHHHHCCCCCCHHCCCCEEECCCCCCCCCCHHHHCCCCCCCHHH
LPAVAREVLRAGPDVAELRAAADRMLDAVAYLDA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGFGARLAAAKAQRGPLCVGIDPHPELLRAWDLPTTADGLAAFCDICVEAFAGFAVVKP
CCCHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
QVAFFEAYGAAGFAVLERTIAALRSAGVLVLADAKRGDIGTTMAAYAAAWAGDSPLAADA
HHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHH
VTASPYLGFGSLRPLLEAAAAHDRGVFVLAATSNPEGATVQRAAFDGRTVAQLVVDQAAV
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEHHHCCCHHHHHHHHHHHHH
VNRSTNPAGPGYVGVVVGATVLQPPDLSALGGPVLVPGLGVQGGRPEALAGLGGAEPGQL
HCCCCCCCCCCEEEHHHHHHHCCCCCCHHCCCCEEECCCCCCCCCCHHHHCCCCCCCHHH
LPAVAREVLRAGPDVAELRAAADRMLDAVAYLDA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA