| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407205
Identifier: 41407205
GI number: 41407205
Start: 1159025
End: 1159546
Strand: Direct
Name: 41407205
Synonym: MAP1107
Alternate gene names: NA
Gene position: 1159025-1159546 (Clockwise)
Preceding gene: 41407204
Following gene: 41407206
Centisome position: 24.0
GC content: 69.16
Gene sequence:
>522_bases ATGAGAAGACATGCCGCCCTGCTGGCGTCGGTGCTGATCGCGGTCGCCGCGCTGGGCACCGGGTGCTCGCTGGAATCCCT GTCCCAGTCGGCCGGGGTGGTCAACGTGGTGGTGGGCTACCAGTCCAAGACCATCAACACCGTCACCGCGGGCACGCTGC TGCGCGCCCAGGGCTACCTGGAGCGCCGCCTGGCCGACATCACCACCCGCACCGGCACCAAATACGCGGTGCGCTGGCAG GATTACGACACCGGGGCGCCGATCACCGCGCAGATGCTCGCCGAAAAGATCGACATCGGCTCGATGGGCGACTACCCGAT GCTGATCAACGGCTCCAAGACGCAGGCCAACCCGCTGGCCCGCACCGAGATGGTCTCCATCACCGGCTACAACCCCAAGG GCGCGCTGAACATGGTGGTGGTCAGCCCGGATTCGCGGGCCAGGACCTGGCCGACCTGGCCGGCGCCAAGGTCTCGGCCA GCGTGGGCTCGGCCGGCCACGGCACCCTGGTGCGGGCCCTGA
Upstream 100 bases:
>100_bases TGGTACTGCGGCCCGTGCGCCGCCCGCTGCCCGACCGGCGCGGTCACCGTCAACATGCCCTACCTGCTTCGCTGAAAAGC GTTCACCCCCAGGAACTTCC
Downstream 100 bases:
>100_bases GCCGGGCCGGCGTCAACGGTGTCGAGGTGCTCAACCAGCAGCCCCAGGTCGGGGCGTCGGCGCTGGAATCCGGTCAGGTG CAAGCACTTTCGCAGTTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: ABC-Type Nitrate/Sulfonate/Bicarbonate Transport Systems; Lipoprotein
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MRRHAALLASVLIAVAALGTGCSLESLSQSAGVVNVVVGYQSKTINTVTAGTLLRAQGYLERRLADITTRTGTKYAVRWQ DYDTGAPITAQMLAEKIDIGSMGDYPMLINGSKTQANPLARTEMVSITGYNPKGALNMVVVSPDSRARTWPTWPAPRSRP AWARPATAPWCGP
Sequences:
>Translated_173_residues MRRHAALLASVLIAVAALGTGCSLESLSQSAGVVNVVVGYQSKTINTVTAGTLLRAQGYLERRLADITTRTGTKYAVRWQ DYDTGAPITAQMLAEKIDIGSMGDYPMLINGSKTQANPLARTEMVSITGYNPKGALNMVVVSPDSRARTWPTWPAPRSRP AWARPATAPWCGP >Mature_173_residues MRRHAALLASVLIAVAALGTGCSLESLSQSAGVVNVVVGYQSKTINTVTAGTLLRAQGYLERRLADITTRTGTKYAVRWQ DYDTGAPITAQMLAEKIDIGSMGDYPMLINGSKTQANPLARTEMVSITGYNPKGALNMVVVSPDSRARTWPTWPAPRSRP AWARPATAPWCGP
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18532; Mature: 18532
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRHAALLASVLIAVAALGTGCSLESLSQSAGVVNVVVGYQSKTINTVTAGTLLRAQGYL CCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEEECCCCCCEEEHHHHHHHHHHHH ERRLADITTRTGTKYAVRWQDYDTGAPITAQMLAEKIDIGSMGDYPMLINGSKTQANPLA HHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC RTEMVSITGYNPKGALNMVVVSPDSRARTWPTWPAPRSRPAWARPATAPWCGP CEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRHAALLASVLIAVAALGTGCSLESLSQSAGVVNVVVGYQSKTINTVTAGTLLRAQGYL CCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEEECCCCCCEEEHHHHHHHHHHHH ERRLADITTRTGTKYAVRWQDYDTGAPITAQMLAEKIDIGSMGDYPMLINGSKTQANPLA HHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC RTEMVSITGYNPKGALNMVVVSPDSRARTWPTWPAPRSRPAWARPATAPWCGP CEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA