Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407205

Identifier: 41407205

GI number: 41407205

Start: 1159025

End: 1159546

Strand: Direct

Name: 41407205

Synonym: MAP1107

Alternate gene names: NA

Gene position: 1159025-1159546 (Clockwise)

Preceding gene: 41407204

Following gene: 41407206

Centisome position: 24.0

GC content: 69.16

Gene sequence:

>522_bases
ATGAGAAGACATGCCGCCCTGCTGGCGTCGGTGCTGATCGCGGTCGCCGCGCTGGGCACCGGGTGCTCGCTGGAATCCCT
GTCCCAGTCGGCCGGGGTGGTCAACGTGGTGGTGGGCTACCAGTCCAAGACCATCAACACCGTCACCGCGGGCACGCTGC
TGCGCGCCCAGGGCTACCTGGAGCGCCGCCTGGCCGACATCACCACCCGCACCGGCACCAAATACGCGGTGCGCTGGCAG
GATTACGACACCGGGGCGCCGATCACCGCGCAGATGCTCGCCGAAAAGATCGACATCGGCTCGATGGGCGACTACCCGAT
GCTGATCAACGGCTCCAAGACGCAGGCCAACCCGCTGGCCCGCACCGAGATGGTCTCCATCACCGGCTACAACCCCAAGG
GCGCGCTGAACATGGTGGTGGTCAGCCCGGATTCGCGGGCCAGGACCTGGCCGACCTGGCCGGCGCCAAGGTCTCGGCCA
GCGTGGGCTCGGCCGGCCACGGCACCCTGGTGCGGGCCCTGA

Upstream 100 bases:

>100_bases
TGGTACTGCGGCCCGTGCGCCGCCCGCTGCCCGACCGGCGCGGTCACCGTCAACATGCCCTACCTGCTTCGCTGAAAAGC
GTTCACCCCCAGGAACTTCC

Downstream 100 bases:

>100_bases
GCCGGGCCGGCGTCAACGGTGTCGAGGTGCTCAACCAGCAGCCCCAGGTCGGGGCGTCGGCGCTGGAATCCGGTCAGGTG
CAAGCACTTTCGCAGTTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Nitrate/Sulfonate/Bicarbonate Transport Systems; Lipoprotein

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRRHAALLASVLIAVAALGTGCSLESLSQSAGVVNVVVGYQSKTINTVTAGTLLRAQGYLERRLADITTRTGTKYAVRWQ
DYDTGAPITAQMLAEKIDIGSMGDYPMLINGSKTQANPLARTEMVSITGYNPKGALNMVVVSPDSRARTWPTWPAPRSRP
AWARPATAPWCGP

Sequences:

>Translated_173_residues
MRRHAALLASVLIAVAALGTGCSLESLSQSAGVVNVVVGYQSKTINTVTAGTLLRAQGYLERRLADITTRTGTKYAVRWQ
DYDTGAPITAQMLAEKIDIGSMGDYPMLINGSKTQANPLARTEMVSITGYNPKGALNMVVVSPDSRARTWPTWPAPRSRP
AWARPATAPWCGP
>Mature_173_residues
MRRHAALLASVLIAVAALGTGCSLESLSQSAGVVNVVVGYQSKTINTVTAGTLLRAQGYLERRLADITTRTGTKYAVRWQ
DYDTGAPITAQMLAEKIDIGSMGDYPMLINGSKTQANPLARTEMVSITGYNPKGALNMVVVSPDSRARTWPTWPAPRSRP
AWARPATAPWCGP

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18532; Mature: 18532

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRHAALLASVLIAVAALGTGCSLESLSQSAGVVNVVVGYQSKTINTVTAGTLLRAQGYL
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEEECCCCCCEEEHHHHHHHHHHHH
ERRLADITTRTGTKYAVRWQDYDTGAPITAQMLAEKIDIGSMGDYPMLINGSKTQANPLA
HHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC
RTEMVSITGYNPKGALNMVVVSPDSRARTWPTWPAPRSRPAWARPATAPWCGP
CEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRHAALLASVLIAVAALGTGCSLESLSQSAGVVNVVVGYQSKTINTVTAGTLLRAQGYL
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEEECCCCCCEEEHHHHHHHHHHHH
ERRLADITTRTGTKYAVRWQDYDTGAPITAQMLAEKIDIGSMGDYPMLINGSKTQANPLA
HHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC
RTEMVSITGYNPKGALNMVVVSPDSRARTWPTWPAPRSRPAWARPATAPWCGP
CEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA