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The map label for this gene is 41407174

Identifier: 41407174

GI number: 41407174

Start: 1128662

End: 1129063

Strand: Direct

Name: 41407174

Synonym: MAP1076

Alternate gene names: NA

Gene position: 1128662-1129063 (Clockwise)

Preceding gene: 41407171

Following gene: 41407175

Centisome position: 23.37

GC content: 71.39

Gene sequence:

>402_bases
ATGCATACCGATGTGTTGGACGTGGACACCTCCCGTCGCCGCATCGTCGATCTCACCGAGGCGGTGCGCGGGTTCTGCTG
GTCCCGCGGTGACGGCCTGTGCAACGTGTTCGTCCCGCACGCGACGGCCGGGGTGGCCGTCATCGAGATGGGCGCCGGCT
CCGACGACGACCTGGTCGACACGCTGGAGCGGCTGCTGCCCCGCGACGACCGGTACCGGCACGCGCACGGCTCCCCGGGC
CACGGCGCCGACCACGTGCTGCCGGCCCTGGTCGCGCCGTCGGTGACGGTCCCGGTCTCGGCGGGGGAGCCGATGCTGGG
CACCTGGCAGAGCATCGTGCTGGTCGACCTCAACCGCGACAACCCGCAACGCTCCGTGCGGCTGAGCTTTTTGGAGGGCT
AG

Upstream 100 bases:

>100_bases
AGTTACCTTCCTCTCACCGGTGGCGGCCCGCAATGCCCAAATGTGGTCGCGCTCACAAACGATTGGCTGGTCGCGACGCC
CGCGCCGTAGGCTGGTTCGA

Downstream 100 bases:

>100_bases
CGGCGCGGTGGTCCAATATTCCAGCGAATAGGCTGGGATTACACGTCAATGCAGAAAAGCAACGGGAAGAAGCGGGCTGG
AAAGTGCAGACACACGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MHTDVLDVDTSRRRIVDLTEAVRGFCWSRGDGLCNVFVPHATAGVAVIEMGAGSDDDLVDTLERLLPRDDRYRHAHGSPG
HGADHVLPALVAPSVTVPVSAGEPMLGTWQSIVLVDLNRDNPQRSVRLSFLEG

Sequences:

>Translated_133_residues
MHTDVLDVDTSRRRIVDLTEAVRGFCWSRGDGLCNVFVPHATAGVAVIEMGAGSDDDLVDTLERLLPRDDRYRHAHGSPG
HGADHVLPALVAPSVTVPVSAGEPMLGTWQSIVLVDLNRDNPQRSVRLSFLEG
>Mature_133_residues
MHTDVLDVDTSRRRIVDLTEAVRGFCWSRGDGLCNVFVPHATAGVAVIEMGAGSDDDLVDTLERLLPRDDRYRHAHGSPG
HGADHVLPALVAPSVTVPVSAGEPMLGTWQSIVLVDLNRDNPQRSVRLSFLEG

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 14420; Mature: 14420

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTDVLDVDTSRRRIVDLTEAVRGFCWSRGDGLCNVFVPHATAGVAVIEMGAGSDDDLVD
CCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHH
TLERLLPRDDRYRHAHGSPGHGADHVLPALVAPSVTVPVSAGEPMLGTWQSIVLVDLNRD
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCC
NPQRSVRLSFLEG
CCCCEEEEEEECC
>Mature Secondary Structure
MHTDVLDVDTSRRRIVDLTEAVRGFCWSRGDGLCNVFVPHATAGVAVIEMGAGSDDDLVD
CCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHH
TLERLLPRDDRYRHAHGSPGHGADHVLPALVAPSVTVPVSAGEPMLGTWQSIVLVDLNRD
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCC
NPQRSVRLSFLEG
CCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]