| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yxbG [H]
Identifier: 41406796
GI number: 41406796
Start: 720623
End: 721450
Strand: Direct
Name: yxbG [H]
Synonym: MAP0698
Alternate gene names: 41406796
Gene position: 720623-721450 (Clockwise)
Preceding gene: 41406795
Following gene: 41406797
Centisome position: 14.92
GC content: 68.84
Gene sequence:
>828_bases GTGGCAGAGATCGACGCGCTGTGGCGCTATGACCGCCGCCGCGCGGTGGTGACCGGATGCGCGTCGGGCATCGGCGAGCA GGTCGTGCGCCAGCTCGGCCAACTCGGCGCCGACGTGATCGGGTTGGACCAGCGCCGGCCCGGCTGCGCACTCGGCGAGT TCCACGAGGTGGACCTGGCCGATCCCGAGTCCATCGATCGCGCCGCGGCCGGCATCGACGGCCCCGTCGACGCGCTGTTC AACATCGCGGGCGTGTCCTCGGGGATCGGCAACCCGCCGCTGGTAGTGACCGTCAACTTCCTGGGCACGCGCCAACTCAC CGAGGCGCTGATCCCGAAGATGGTGGCCGGGTCGTCCATCGTGAGCGTGTCCTCGCTCGCCGCCGCCGGGTACCGCGAGC ACCTGCGGCAGGCGGCGCCGCTGCTGGACACCGCCACCATGCGGGAGGGCATCGACTGGTGCACAAGCCATCCCGAAGAG CTGGGCACCGGCTATCAACTGTCCAAGGAAGCCCTGATTCTCTACACCATGCGCAGCGTCACCCCGCTGGGTGCTCGTGG TATCCGCATCAACTGCACCGGCCCCGGGGTGACCGAGACGCCGATCTTGGATCAACTGCGCACCGCCTACGGGCAGGGCT TCCTGGACGACATCCCCAAACCGCTGGGCCGGGTCAGCCGGCCCGCCGAGCAAGCAGCGGTGCTGCTCTTCCTCAATAGC GATGCGGCCAGCTATATTTCGGGCCAGGTGGTGTGGGTCGACGGCGGAAACGTAGGCGCCGCGATCGCTCGCGAACTCGA GGAAGGGCGTACTCCGTGGCCAGTGTGA
Upstream 100 bases:
>100_bases GCCATGGCGGAGATCAACGAAGGCCGGGTCCAGGCCGCGCAGCGGGCGAAGGAACAACAGCAGCAGAAGAAGTAGTTCTC AACGGATTTCGGGGCGAAAC
Downstream 100 bases:
>100_bases CCGACTTCCGCCGGGCCGCCCGCGACGTCAGCAACTGGGGCCGCTGGGGCGATGACGACGAGCTCGGCACACTGAACTTC ATCACCGAGGAAAAGATCGC
Product: 3-alpha-hydroxysteroid dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MAEIDALWRYDRRRAVVTGCASGIGEQVVRQLGQLGADVIGLDQRRPGCALGEFHEVDLADPESIDRAAAGIDGPVDALF NIAGVSSGIGNPPLVVTVNFLGTRQLTEALIPKMVAGSSIVSVSSLAAAGYREHLRQAAPLLDTATMREGIDWCTSHPEE LGTGYQLSKEALILYTMRSVTPLGARGIRINCTGPGVTETPILDQLRTAYGQGFLDDIPKPLGRVSRPAEQAAVLLFLNS DAASYISGQVVWVDGGNVGAAIARELEEGRTPWPV
Sequences:
>Translated_275_residues MAEIDALWRYDRRRAVVTGCASGIGEQVVRQLGQLGADVIGLDQRRPGCALGEFHEVDLADPESIDRAAAGIDGPVDALF NIAGVSSGIGNPPLVVTVNFLGTRQLTEALIPKMVAGSSIVSVSSLAAAGYREHLRQAAPLLDTATMREGIDWCTSHPEE LGTGYQLSKEALILYTMRSVTPLGARGIRINCTGPGVTETPILDQLRTAYGQGFLDDIPKPLGRVSRPAEQAAVLLFLNS DAASYISGQVVWVDGGNVGAAIARELEEGRTPWPV >Mature_274_residues AEIDALWRYDRRRAVVTGCASGIGEQVVRQLGQLGADVIGLDQRRPGCALGEFHEVDLADPESIDRAAAGIDGPVDALFN IAGVSSGIGNPPLVVTVNFLGTRQLTEALIPKMVAGSSIVSVSSLAAAGYREHLRQAAPLLDTATMREGIDWCTSHPEEL GTGYQLSKEALILYTMRSVTPLGARGIRINCTGPGVTETPILDQLRTAYGQGFLDDIPKPLGRVSRPAEQAAVLLFLNSD AASYISGQVVWVDGGNVGAAIARELEEGRTPWPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Escherichia coli, GI87082100, Length=273, Percent_Identity=26.7399267399267, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787335, Length=272, Percent_Identity=26.4705882352941, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 29144; Mature: 29013
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIDALWRYDRRRAVVTGCASGIGEQVVRQLGQLGADVIGLDQRRPGCALGEFHEVDLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC DPESIDRAAAGIDGPVDALFNIAGVSSGIGNPPLVVTVNFLGTRQLTEALIPKMVAGSSI CHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHH VSVSSLAAAGYREHLRQAAPLLDTATMREGIDWCTSHPEELGTGYQLSKEALILYTMRSV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCEECCCEEEEEEHHHC TPLGARGIRINCTGPGVTETPILDQLRTAYGQGFLDDIPKPLGRVSRPAEQAAVLLFLNS CCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEEEEEECC DAASYISGQVVWVDGGNVGAAIARELEEGRTPWPV CCHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AEIDALWRYDRRRAVVTGCASGIGEQVVRQLGQLGADVIGLDQRRPGCALGEFHEVDLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC DPESIDRAAAGIDGPVDALFNIAGVSSGIGNPPLVVTVNFLGTRQLTEALIPKMVAGSSI CHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHH VSVSSLAAAGYREHLRQAAPLLDTATMREGIDWCTSHPEELGTGYQLSKEALILYTMRSV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCEECCCEEEEEEHHHC TPLGARGIRINCTGPGVTETPILDQLRTAYGQGFLDDIPKPLGRVSRPAEQAAVLLFLNS CCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEEEEEECC DAASYISGQVVWVDGGNVGAAIARELEEGRTPWPV CCHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377 [H]