| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406758
Identifier: 41406758
GI number: 41406758
Start: 682363
End: 683436
Strand: Direct
Name: 41406758
Synonym: MAP0660
Alternate gene names: NA
Gene position: 682363-683436 (Clockwise)
Preceding gene: 41406752
Following gene: 41406761
Centisome position: 14.13
GC content: 68.25
Gene sequence:
>1074_bases GTGACTCAAGATACGTCCGCATCGCGCCCCCTGACCAGCGACGTAACGGGCAGCGATGCGGCCGGTCTCACTGAGCAGTC GATTTCGGCCCGGCCGGCCGATGCCGGCGCCGCGGTTGCCGGCGGCTGCCCGGTTTCGCCGCTGGGCTATGAGGCCCCGC CCGCGCCGCTCGGCCCCGACTCGCTGACCTGGAAGTACTTCGGGGACTGGCGGGGCATGCTGCAGGGCCCGTGGGCCGGT TCGATGCAGAACATGCACCCGCAATTGGGCGCGGCCGTGCTGGACCATTCCACCTTCTTCCGCGAGCGCTGGCCGCGGCT GCTGCGCTCGTTGTATCCCATCGGCGGCGTCGTGTTCGACGGCGACCGCGCCCCGATCACCGGCGCCGAGGTGCGCGACT ACCACACCGACATCAAGGGCGTCGACGAGCAGGGCCGGCGTTATCACGCGTTGAACCCCGACGTCTTCTACTGGGCGCAC TCCACCTTCTTCGTCGGCACCATCCATGTGGCCGAACGGTTCTGCGGCGGCATCACCGAGGAGCAGAAGCGGCAGCTGTT CGACGAACACGTGCAGTGGTACCGGATGTACGGCATGAGCATGCGCCCGGTGCCCAAGTCGTGGGAGGAGTTCCAGGAGT ACTGGGATCACATGTGCCGCAACGTGTTGGAGAACAACGAGGCGGCCCGGGCCGTGCTGGATCTGACCGAGTTGCCCAAA CCGCCGTTCGCGCAATGGATTCCGAACCGCCTGTGGGCCGCGCAGCGCAAACTGTTGGCGCCGTTCTTCGTCTGGGTGAC GGTCGGCCTGTACGACCCGCCGGTGCGGGAGCTGATGGGCTACCGGTGGTCGGCCCGCGACGAGTGGTTGCACCGGCGCT TCGGCGACCTGGTTCGTATCGTGTTCGCCTTGGTGCCCAGCAGATTCCGCAAGCACCCGCGGGCCCGCGCCGGACTGGAC CGCGCCAGCGGCCGGATCCCGCTCGACGCCCCGCTGGTGCAGACTCCGGCGCGCAATCTGCCGCCCGAGGACGAACGCGG AAATCCCAAGCACTACTGCCCGATGGTGTCGTAG
Upstream 100 bases:
>100_bases GTCCAGCGGCCCCGTCGTTGACCCGTCTGCACATCGCTCCTAAGCTGAAAACTTGACAACGGTTGTAGTCAAAAATTCAC ATACCCACAGGAATCCAATA
Downstream 100 bases:
>100_bases CCGGGCGCCGACGGGCTTAGGCGTGGGCGTGCTGGTGCACGTCCTCGAGGCCCGCCTGATGCACGTGCCGATGGGTGTGT TCGGTGCCGTCGGTGTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTQDTSASRPLTSDVTGSDAAGLTEQSISARPADAGAAVAGGCPVSPLGYEAPPAPLGPDSLTWKYFGDWRGMLQGPWAG SMQNMHPQLGAAVLDHSTFFRERWPRLLRSLYPIGGVVFDGDRAPITGAEVRDYHTDIKGVDEQGRRYHALNPDVFYWAH STFFVGTIHVAERFCGGITEEQKRQLFDEHVQWYRMYGMSMRPVPKSWEEFQEYWDHMCRNVLENNEAARAVLDLTELPK PPFAQWIPNRLWAAQRKLLAPFFVWVTVGLYDPPVRELMGYRWSARDEWLHRRFGDLVRIVFALVPSRFRKHPRARAGLD RASGRIPLDAPLVQTPARNLPPEDERGNPKHYCPMVS
Sequences:
>Translated_357_residues MTQDTSASRPLTSDVTGSDAAGLTEQSISARPADAGAAVAGGCPVSPLGYEAPPAPLGPDSLTWKYFGDWRGMLQGPWAG SMQNMHPQLGAAVLDHSTFFRERWPRLLRSLYPIGGVVFDGDRAPITGAEVRDYHTDIKGVDEQGRRYHALNPDVFYWAH STFFVGTIHVAERFCGGITEEQKRQLFDEHVQWYRMYGMSMRPVPKSWEEFQEYWDHMCRNVLENNEAARAVLDLTELPK PPFAQWIPNRLWAAQRKLLAPFFVWVTVGLYDPPVRELMGYRWSARDEWLHRRFGDLVRIVFALVPSRFRKHPRARAGLD RASGRIPLDAPLVQTPARNLPPEDERGNPKHYCPMVS >Mature_356_residues TQDTSASRPLTSDVTGSDAAGLTEQSISARPADAGAAVAGGCPVSPLGYEAPPAPLGPDSLTWKYFGDWRGMLQGPWAGS MQNMHPQLGAAVLDHSTFFRERWPRLLRSLYPIGGVVFDGDRAPITGAEVRDYHTDIKGVDEQGRRYHALNPDVFYWAHS TFFVGTIHVAERFCGGITEEQKRQLFDEHVQWYRMYGMSMRPVPKSWEEFQEYWDHMCRNVLENNEAARAVLDLTELPKP PFAQWIPNRLWAAQRKLLAPFFVWVTVGLYDPPVRELMGYRWSARDEWLHRRFGDLVRIVFALVPSRFRKHPRARAGLDR ASGRIPLDAPLVQTPARNLPPEDERGNPKHYCPMVS
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40542; Mature: 40411
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDTSASRPLTSDVTGSDAAGLTEQSISARPADAGAAVAGGCPVSPLGYEAPPAPLGPD CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC SLTWKYFGDWRGMLQGPWAGSMQNMHPQLGAAVLDHSTFFRERWPRLLRSLYPIGGVVFD CCEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC GDRAPITGAEVRDYHTDIKGVDEQGRRYHALNPDVFYWAHSTFFVGTIHVAERFCGGITE CCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCCH EQKRQLFDEHVQWYRMYGMSMRPVPKSWEEFQEYWDHMCRNVLENNEAARAVLDLTELPK HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC PPFAQWIPNRLWAAQRKLLAPFFVWVTVGLYDPPVRELMGYRWSARDEWLHRRFGDLVRI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHH VFALVPSRFRKHPRARAGLDRASGRIPLDAPLVQTPARNLPPEDERGNPKHYCPMVS HHHHHHHHHHHCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQDTSASRPLTSDVTGSDAAGLTEQSISARPADAGAAVAGGCPVSPLGYEAPPAPLGPD CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC SLTWKYFGDWRGMLQGPWAGSMQNMHPQLGAAVLDHSTFFRERWPRLLRSLYPIGGVVFD CCEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC GDRAPITGAEVRDYHTDIKGVDEQGRRYHALNPDVFYWAHSTFFVGTIHVAERFCGGITE CCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCCH EQKRQLFDEHVQWYRMYGMSMRPVPKSWEEFQEYWDHMCRNVLENNEAARAVLDLTELPK HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC PPFAQWIPNRLWAAQRKLLAPFFVWVTVGLYDPPVRELMGYRWSARDEWLHRRFGDLVRI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHH VFALVPSRFRKHPRARAGLDRASGRIPLDAPLVQTPARNLPPEDERGNPKHYCPMVS HHHHHHHHHHHCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA