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The map label for this gene is pepC

Identifier: 41406730

GI number: 41406730

Start: 655327

End: 656625

Strand: Direct

Name: pepC

Synonym: MAP0632

Alternate gene names: 41406730

Gene position: 655327-656625 (Clockwise)

Preceding gene: 41406724

Following gene: 41406731

Centisome position: 13.57

GC content: 72.21

Gene sequence:

>1299_bases
ATGTCCGGCGGGCCTCGAAACCAGACGAAGTCCTCAGCGAGTGCGCAAGGGCTCTGCGAGTTCATCGACGCCTCTCCGTC
GCCGTTTCACGTCTGCGCCACGGTGGCCGCTCGGCTGATCGCTGCCGGGTACACCGAACTGGACGAGGCTAAACACTGGC
CATCGCAGCCCGGCCGCTACTTCACCGTGCGGGCCGGCTCCCTGGTGGCCTGGGATTCAACCGGCGCCGACGGCCCGTTC
CGGATCGTGGGCGCGCACACCGACAGCCCGAACCTGCGGGTCAAGCAGCATCCCGACCGGACGGTCGCCGGGTGGCGGGT
GGTGGCGCTGCAGCCCTATGGCGGCGCCTGGCTCAACTCGTGGCTGGACCGCGACCTGGGCATCAGCGGACGCCTGTCGG
TGCGCGACGGTTCCGGGCTCAGCCACCGGCTGGTCCGCATCGACGAGCCGATCCTGCGGGTGCCGCAGCTGGCCATCCAT
TTGGCCGAGGACCGCAAGTCGGTGACGCTGGATCCGCAGCGGCACGTCAACGCGGTGTGGGGCGTCGGCGAGTCGGCGCG
GTCGTTCGTCGACTACGTCGCGGCACGGGCCGCGGTGGCGCCGGACGACGTGCTGGCCGCCGACCTGATGACCCACGACC
TGACGCCCTCGACGCTGATCGGCGCCTCGGAGAACGGAACGGCCGACCTGCTCAGCGCGCCCCGGCTGGACAACCAGGCC
AGCTGCTACGCGGGCCTGGAGGCGCTGCTGGCGACCGAGCCGAGCGGGCCGCTGCCCGTCCTGGTCCTCTTCGACCACGA
GGAGGTCGGGTCGTCCTCGGACCACGGCGCGCACTCCGACTTGCTGAGCACCGTGCTGGAGCGAATTGTGTTGGCGGCCG
GCGGTACTCGGCAGGACTACCTGTCCCGGCTGCCGGCCTCGCTGCTCGCCTCGGCGGACATGGCACACGCCACCCACCCC
AACTACCCGGAGCGCCACGAGCCCGGCCACCCGATCGCCGTCAACGCCGGACCGGTGCTCAAGGTGCACCCGAACCTGCG
CTACGCCACCGACAGCCGCACCGCCGCGGCCTTCGCGCTGGCCTGCCGGCAGGCCGGGGTGACGCTGCAGCGCTACGAGC
ACCGGGCCGACCTGCCGTGCGGGTCGACGATCGGTCCGCTGGCCGCGGCGCGCACCGGCATCCCGACGGTCGACGTGGGC
GCGGCGCAGCTGGCGATGCACTCCGCGCGCGAGCTGATGGGCGCGCACGACGTCGCCGCGTACTCGGCCGCGATGCACGC
GTTCCTTTCTCCCGGTTAG

Upstream 100 bases:

>100_bases
CGCCGGGGTGAGCGGCGCGAGGATGGGCTGTGGCTGGACGGGGGGCACGTGGATGACCCTAACGTGAACGCCGTGACGGC
GGACAGCCACGATGTTCACC

Downstream 100 bases:

>100_bases
CGGCATAGGCTCGGCCGGTATGGGGCTCAACGTGGAGATGGTGACCTTCGACTGCCGGGACCCCGCGCGGCTGGCCGGCT
GGTGGGCCGAGCAGTTCGGC

Product: putative aminopeptidase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MSGGPRNQTKSSASAQGLCEFIDASPSPFHVCATVAARLIAAGYTELDEAKHWPSQPGRYFTVRAGSLVAWDSTGADGPF
RIVGAHTDSPNLRVKQHPDRTVAGWRVVALQPYGGAWLNSWLDRDLGISGRLSVRDGSGLSHRLVRIDEPILRVPQLAIH
LAEDRKSVTLDPQRHVNAVWGVGESARSFVDYVAARAAVAPDDVLAADLMTHDLTPSTLIGASENGTADLLSAPRLDNQA
SCYAGLEALLATEPSGPLPVLVLFDHEEVGSSSDHGAHSDLLSTVLERIVLAAGGTRQDYLSRLPASLLASADMAHATHP
NYPERHEPGHPIAVNAGPVLKVHPNLRYATDSRTAAAFALACRQAGVTLQRYEHRADLPCGSTIGPLAAARTGIPTVDVG
AAQLAMHSARELMGAHDVAAYSAAMHAFLSPG

Sequences:

>Translated_432_residues
MSGGPRNQTKSSASAQGLCEFIDASPSPFHVCATVAARLIAAGYTELDEAKHWPSQPGRYFTVRAGSLVAWDSTGADGPF
RIVGAHTDSPNLRVKQHPDRTVAGWRVVALQPYGGAWLNSWLDRDLGISGRLSVRDGSGLSHRLVRIDEPILRVPQLAIH
LAEDRKSVTLDPQRHVNAVWGVGESARSFVDYVAARAAVAPDDVLAADLMTHDLTPSTLIGASENGTADLLSAPRLDNQA
SCYAGLEALLATEPSGPLPVLVLFDHEEVGSSSDHGAHSDLLSTVLERIVLAAGGTRQDYLSRLPASLLASADMAHATHP
NYPERHEPGHPIAVNAGPVLKVHPNLRYATDSRTAAAFALACRQAGVTLQRYEHRADLPCGSTIGPLAAARTGIPTVDVG
AAQLAMHSARELMGAHDVAAYSAAMHAFLSPG
>Mature_431_residues
SGGPRNQTKSSASAQGLCEFIDASPSPFHVCATVAARLIAAGYTELDEAKHWPSQPGRYFTVRAGSLVAWDSTGADGPFR
IVGAHTDSPNLRVKQHPDRTVAGWRVVALQPYGGAWLNSWLDRDLGISGRLSVRDGSGLSHRLVRIDEPILRVPQLAIHL
AEDRKSVTLDPQRHVNAVWGVGESARSFVDYVAARAAVAPDDVLAADLMTHDLTPSTLIGASENGTADLLSAPRLDNQAS
CYAGLEALLATEPSGPLPVLVLFDHEEVGSSSDHGAHSDLLSTVLERIVLAAGGTRQDYLSRLPASLLASADMAHATHPN
YPERHEPGHPIAVNAGPVLKVHPNLRYATDSRTAAAFALACRQAGVTLQRYEHRADLPCGSTIGPLAAARTGIPTVDVGA
AQLAMHSARELMGAHDVAAYSAAMHAFLSPG

Specific function: Unknown

COG id: COG1362

COG function: function code E; Aspartyl aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M18 family [H]

Homologues:

Organism=Homo sapiens, GI156416028, Length=460, Percent_Identity=36.5217391304348, Blast_Score=268, Evalue=1e-71,
Organism=Caenorhabditis elegans, GI17552916, Length=434, Percent_Identity=36.6359447004608, Blast_Score=251, Evalue=5e-67,
Organism=Saccharomyces cerevisiae, GI6321905, Length=473, Percent_Identity=32.1353065539112, Blast_Score=238, Evalue=1e-63,
Organism=Saccharomyces cerevisiae, GI6322746, Length=457, Percent_Identity=29.3216630196937, Blast_Score=181, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022984
- InterPro:   IPR001948 [H]

Pfam domain/function: PF02127 Peptidase_M18 [H]

EC number: NA

Molecular weight: Translated: 45698; Mature: 45567

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGPRNQTKSSASAQGLCEFIDASPSPFHVCATVAARLIAAGYTELDEAKHWPSQPGRY
CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCE
FTVRAGSLVAWDSTGADGPFRIVGAHTDSPNLRVKQHPDRTVAGWRVVALQPYGGAWLNS
EEEECCCEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHH
WLDRDLGISGRLSVRDGSGLSHRLVRIDEPILRVPQLAIHLAEDRKSVTLDPQRHVNAVW
HHHHCCCCCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH
GVGESARSFVDYVAARAAVAPDDVLAADLMTHDLTPSTLIGASENGTADLLSAPRLDNQA
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEECCCCCCCHHHHCCCCCCCCH
SCYAGLEALLATEPSGPLPVLVLFDHEEVGSSSDHGAHSDLLSTVLERIVLAAGGTRQDY
HHHHHHHHHHHCCCCCCCEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
LSRLPASLLASADMAHATHPNYPERHEPGHPIAVNAGPVLKVHPNLRYATDSRTAAAFAL
HHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEECCCCEEECCCHHHHHHHH
ACRQAGVTLQRYEHRADLPCGSTIGPLAAARTGIPTVDVGAAQLAMHSARELMGAHDVAA
HHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YSAAMHAFLSPG
HHHHHHHHCCCC
>Mature Secondary Structure 
SGGPRNQTKSSASAQGLCEFIDASPSPFHVCATVAARLIAAGYTELDEAKHWPSQPGRY
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCE
FTVRAGSLVAWDSTGADGPFRIVGAHTDSPNLRVKQHPDRTVAGWRVVALQPYGGAWLNS
EEEECCCEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHH
WLDRDLGISGRLSVRDGSGLSHRLVRIDEPILRVPQLAIHLAEDRKSVTLDPQRHVNAVW
HHHHCCCCCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH
GVGESARSFVDYVAARAAVAPDDVLAADLMTHDLTPSTLIGASENGTADLLSAPRLDNQA
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEECCCCCCCHHHHCCCCCCCCH
SCYAGLEALLATEPSGPLPVLVLFDHEEVGSSSDHGAHSDLLSTVLERIVLAAGGTRQDY
HHHHHHHHHHHCCCCCCCEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
LSRLPASLLASADMAHATHPNYPERHEPGHPIAVNAGPVLKVHPNLRYATDSRTAAAFAL
HHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEECCCCEEECCCHHHHHHHH
ACRQAGVTLQRYEHRADLPCGSTIGPLAAARTGIPTVDVGAAQLAMHSARELMGAHDVAA
HHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YSAAMHAFLSPG
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]