| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406722
Identifier: 41406722
GI number: 41406722
Start: 649788
End: 650522
Strand: Direct
Name: 41406722
Synonym: MAP0624
Alternate gene names: NA
Gene position: 649788-650522 (Clockwise)
Preceding gene: 41406721
Following gene: 41406723
Centisome position: 13.45
GC content: 71.43
Gene sequence:
>735_bases ATGGCCGAAATGCGTCAGTTGCATATCTACGATTGTGCCTTGATGGACAAGCTGCCGATGCGCGTCTTCCTGGCCACCAT GGTGGTCGCCGGCAGCTTCGCGGTTGCCCTGATCGTCGTCATTCCTGCGTACGGCGAGCCCGAGACCTGCCCGGGGATAT GCGACCGGATCCCCAACACCGCGTGGATCGATCAGCATGCGGTGCCGCTGGATGCGGTGTACCACTGGCCCGCGCTCGCC GGTCAGGCGGCGCACACCACCGGCGCGGCGCCCGGCCCGCGTTTCCGGTTCGAGGAGCTGTGCGGCGCGCCGGCCCTGCC GCAGGACCCGCGCGACTCGGCGGTGGTGGCGCGTTCGACGGTTGCCCATCCCGACGGGCAGTGGCAGCTGCAGGCGCAGG TGCTGCACTGGCGCGGCGACACCGCCCACGGCGGCGCCGTCGCGGCCACGGTGTTCGGCAACGCCGTCGCCGCGCTGCGC GGCTGCCAGCAGCGCGCGCCGCAGGAATCGCCGTCGCTGACCAGCGACGAGCCGACCCGGATGGCCGCCGTGATCAGCGG CCCGGTGGTGATGCACACCTATCTGCTGGCGCACCCTGCCAGCAGCACCATCAGCGAGCTGACGCTGTGGTCGTCGGCGC CGCCGCAGACGCCGTGGCCGGCGATGGCGGACGACCCGGTGCTGGGCGCCATGAACGCGTCGTTGTGCGAGGCCTACATC GCCTCGTGCCCGTGA
Upstream 100 bases:
>100_bases TCAAGATGGCGGTGAGGCCGGTGATGCCCTCGAAACCGTGTGCGAAGGTACCGGGGTCAAAGAGCACTCGGGTGTGGTCG AACTCGGCAAGTAGGCACGA
Downstream 100 bases:
>100_bases TCCCGAGCTGCGCTTTCGCCGGTAGAGTTGGCGCGGAAAACGCCAACACAGGAGGAGCGCCGGTGGCCCGGGTGATCGTG AGTGTGATGCCCAAAGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MAEMRQLHIYDCALMDKLPMRVFLATMVVAGSFAVALIVVIPAYGEPETCPGICDRIPNTAWIDQHAVPLDAVYHWPALA GQAAHTTGAAPGPRFRFEELCGAPALPQDPRDSAVVARSTVAHPDGQWQLQAQVLHWRGDTAHGGAVAATVFGNAVAALR GCQQRAPQESPSLTSDEPTRMAAVISGPVVMHTYLLAHPASSTISELTLWSSAPPQTPWPAMADDPVLGAMNASLCEAYI ASCP
Sequences:
>Translated_244_residues MAEMRQLHIYDCALMDKLPMRVFLATMVVAGSFAVALIVVIPAYGEPETCPGICDRIPNTAWIDQHAVPLDAVYHWPALA GQAAHTTGAAPGPRFRFEELCGAPALPQDPRDSAVVARSTVAHPDGQWQLQAQVLHWRGDTAHGGAVAATVFGNAVAALR GCQQRAPQESPSLTSDEPTRMAAVISGPVVMHTYLLAHPASSTISELTLWSSAPPQTPWPAMADDPVLGAMNASLCEAYI ASCP >Mature_243_residues AEMRQLHIYDCALMDKLPMRVFLATMVVAGSFAVALIVVIPAYGEPETCPGICDRIPNTAWIDQHAVPLDAVYHWPALAG QAAHTTGAAPGPRFRFEELCGAPALPQDPRDSAVVARSTVAHPDGQWQLQAQVLHWRGDTAHGGAVAATVFGNAVAALRG CQQRAPQESPSLTSDEPTRMAAVISGPVVMHTYLLAHPASSTISELTLWSSAPPQTPWPAMADDPVLGAMNASLCEAYIA SCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25881; Mature: 25750
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEMRQLHIYDCALMDKLPMRVFLATMVVAGSFAVALIVVIPAYGEPETCPGICDRIPNT CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHEECCCCCCCCCCHHHHHCCCC AWIDQHAVPLDAVYHWPALAGQAAHTTGAAPGPRFRFEELCGAPALPQDPRDSAVVARST CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEHHHH VAHPDGQWQLQAQVLHWRGDTAHGGAVAATVFGNAVAALRGCQQRAPQESPSLTSDEPTR HCCCCCCEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH MAAVISGPVVMHTYLLAHPASSTISELTLWSSAPPQTPWPAMADDPVLGAMNASLCEAYI HHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ASCP HCCC >Mature Secondary Structure AEMRQLHIYDCALMDKLPMRVFLATMVVAGSFAVALIVVIPAYGEPETCPGICDRIPNT CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHEECCCCCCCCCCHHHHHCCCC AWIDQHAVPLDAVYHWPALAGQAAHTTGAAPGPRFRFEELCGAPALPQDPRDSAVVARST CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEHHHH VAHPDGQWQLQAQVLHWRGDTAHGGAVAATVFGNAVAALRGCQQRAPQESPSLTSDEPTR HCCCCCCEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH MAAVISGPVVMHTYLLAHPASSTISELTLWSSAPPQTPWPAMADDPVLGAMNASLCEAYI HHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ASCP HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA