Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41406722

Identifier: 41406722

GI number: 41406722

Start: 649788

End: 650522

Strand: Direct

Name: 41406722

Synonym: MAP0624

Alternate gene names: NA

Gene position: 649788-650522 (Clockwise)

Preceding gene: 41406721

Following gene: 41406723

Centisome position: 13.45

GC content: 71.43

Gene sequence:

>735_bases
ATGGCCGAAATGCGTCAGTTGCATATCTACGATTGTGCCTTGATGGACAAGCTGCCGATGCGCGTCTTCCTGGCCACCAT
GGTGGTCGCCGGCAGCTTCGCGGTTGCCCTGATCGTCGTCATTCCTGCGTACGGCGAGCCCGAGACCTGCCCGGGGATAT
GCGACCGGATCCCCAACACCGCGTGGATCGATCAGCATGCGGTGCCGCTGGATGCGGTGTACCACTGGCCCGCGCTCGCC
GGTCAGGCGGCGCACACCACCGGCGCGGCGCCCGGCCCGCGTTTCCGGTTCGAGGAGCTGTGCGGCGCGCCGGCCCTGCC
GCAGGACCCGCGCGACTCGGCGGTGGTGGCGCGTTCGACGGTTGCCCATCCCGACGGGCAGTGGCAGCTGCAGGCGCAGG
TGCTGCACTGGCGCGGCGACACCGCCCACGGCGGCGCCGTCGCGGCCACGGTGTTCGGCAACGCCGTCGCCGCGCTGCGC
GGCTGCCAGCAGCGCGCGCCGCAGGAATCGCCGTCGCTGACCAGCGACGAGCCGACCCGGATGGCCGCCGTGATCAGCGG
CCCGGTGGTGATGCACACCTATCTGCTGGCGCACCCTGCCAGCAGCACCATCAGCGAGCTGACGCTGTGGTCGTCGGCGC
CGCCGCAGACGCCGTGGCCGGCGATGGCGGACGACCCGGTGCTGGGCGCCATGAACGCGTCGTTGTGCGAGGCCTACATC
GCCTCGTGCCCGTGA

Upstream 100 bases:

>100_bases
TCAAGATGGCGGTGAGGCCGGTGATGCCCTCGAAACCGTGTGCGAAGGTACCGGGGTCAAAGAGCACTCGGGTGTGGTCG
AACTCGGCAAGTAGGCACGA

Downstream 100 bases:

>100_bases
TCCCGAGCTGCGCTTTCGCCGGTAGAGTTGGCGCGGAAAACGCCAACACAGGAGGAGCGCCGGTGGCCCGGGTGATCGTG
AGTGTGATGCCCAAAGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MAEMRQLHIYDCALMDKLPMRVFLATMVVAGSFAVALIVVIPAYGEPETCPGICDRIPNTAWIDQHAVPLDAVYHWPALA
GQAAHTTGAAPGPRFRFEELCGAPALPQDPRDSAVVARSTVAHPDGQWQLQAQVLHWRGDTAHGGAVAATVFGNAVAALR
GCQQRAPQESPSLTSDEPTRMAAVISGPVVMHTYLLAHPASSTISELTLWSSAPPQTPWPAMADDPVLGAMNASLCEAYI
ASCP

Sequences:

>Translated_244_residues
MAEMRQLHIYDCALMDKLPMRVFLATMVVAGSFAVALIVVIPAYGEPETCPGICDRIPNTAWIDQHAVPLDAVYHWPALA
GQAAHTTGAAPGPRFRFEELCGAPALPQDPRDSAVVARSTVAHPDGQWQLQAQVLHWRGDTAHGGAVAATVFGNAVAALR
GCQQRAPQESPSLTSDEPTRMAAVISGPVVMHTYLLAHPASSTISELTLWSSAPPQTPWPAMADDPVLGAMNASLCEAYI
ASCP
>Mature_243_residues
AEMRQLHIYDCALMDKLPMRVFLATMVVAGSFAVALIVVIPAYGEPETCPGICDRIPNTAWIDQHAVPLDAVYHWPALAG
QAAHTTGAAPGPRFRFEELCGAPALPQDPRDSAVVARSTVAHPDGQWQLQAQVLHWRGDTAHGGAVAATVFGNAVAALRG
CQQRAPQESPSLTSDEPTRMAAVISGPVVMHTYLLAHPASSTISELTLWSSAPPQTPWPAMADDPVLGAMNASLCEAYIA
SCP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25881; Mature: 25750

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEMRQLHIYDCALMDKLPMRVFLATMVVAGSFAVALIVVIPAYGEPETCPGICDRIPNT
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHEECCCCCCCCCCHHHHHCCCC
AWIDQHAVPLDAVYHWPALAGQAAHTTGAAPGPRFRFEELCGAPALPQDPRDSAVVARST
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEHHHH
VAHPDGQWQLQAQVLHWRGDTAHGGAVAATVFGNAVAALRGCQQRAPQESPSLTSDEPTR
HCCCCCCEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
MAAVISGPVVMHTYLLAHPASSTISELTLWSSAPPQTPWPAMADDPVLGAMNASLCEAYI
HHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ASCP
HCCC
>Mature Secondary Structure 
AEMRQLHIYDCALMDKLPMRVFLATMVVAGSFAVALIVVIPAYGEPETCPGICDRIPNT
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHEECCCCCCCCCCHHHHHCCCC
AWIDQHAVPLDAVYHWPALAGQAAHTTGAAPGPRFRFEELCGAPALPQDPRDSAVVARST
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEHHHH
VAHPDGQWQLQAQVLHWRGDTAHGGAVAATVFGNAVAALRGCQQRAPQESPSLTSDEPTR
HCCCCCCEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
MAAVISGPVVMHTYLLAHPASSTISELTLWSSAPPQTPWPAMADDPVLGAMNASLCEAYI
HHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ASCP
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA