| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406685
Identifier: 41406685
GI number: 41406685
Start: 612358
End: 612831
Strand: Direct
Name: 41406685
Synonym: MAP0587
Alternate gene names: NA
Gene position: 612358-612831 (Clockwise)
Preceding gene: 41406683
Following gene: 41406686
Centisome position: 12.68
GC content: 67.09
Gene sequence:
>474_bases ATGATTTTCTTTGTCCACCAACGCGATTCGACGGCACCGGCGACCGAACCCGCGCCGTCGGCCGCGCCGCCCAAAGCGGC GGCGCCCAAACCGCCCGCGCCGCGGATCGAGATGGCCGACATGGCGTTCATCGCCGCGCTGAAGCACGAGGGCGTGCCGG TGCCCAGCCAGGACTACGTGATGAAGCAGGGGCACGCGGTGTGCGACTTTCTGGCCCAGCAACACAATTTCGCCGACGCC ATCGGGTTCGTGCAGCGCTCGTCGATCTGGAACGCCGAGCAAAGCGCCGAGGTCACCGCTGGCGCCATCGTCGCCTACTG CCCGCAGTCGCAAGCCACCGCGGCCGACCTGACCGGCCCGGCCTATCAGAACACCCTCTCGGATCTGCAGGCCATCGAGG GAAAGCTGCAGGGCATCGAGGGCGATCTGCAGGGAATTCAGCGGGACCTGGACAACATCCCGGGCCACCGGTAA
Upstream 100 bases:
>100_bases GGCGGCCGCCACGTCCCGCCGGCACGGCGGAGCGCTGCGCCGCGCCGGCCTACTCGCGGCGTTGCCGCTGTCGCTGATCG CCGTCGCAGCCGCTGCGGTG
Downstream 100 bases:
>100_bases CCGTAGCCGGCGCGCAGCGGTTCGGCCATATCGCCGCAGCGCCACCGGTTTGCGGCATAAAGTCCCCTTCGTCCCGATGA TTCTGCCGGCGCGCGACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MIFFVHQRDSTAPATEPAPSAAPPKAAAPKPPAPRIEMADMAFIAALKHEGVPVPSQDYVMKQGHAVCDFLAQQHNFADA IGFVQRSSIWNAEQSAEVTAGAIVAYCPQSQATAADLTGPAYQNTLSDLQAIEGKLQGIEGDLQGIQRDLDNIPGHR
Sequences:
>Translated_157_residues MIFFVHQRDSTAPATEPAPSAAPPKAAAPKPPAPRIEMADMAFIAALKHEGVPVPSQDYVMKQGHAVCDFLAQQHNFADA IGFVQRSSIWNAEQSAEVTAGAIVAYCPQSQATAADLTGPAYQNTLSDLQAIEGKLQGIEGDLQGIQRDLDNIPGHR >Mature_157_residues MIFFVHQRDSTAPATEPAPSAAPPKAAAPKPPAPRIEMADMAFIAALKHEGVPVPSQDYVMKQGHAVCDFLAQQHNFADA IGFVQRSSIWNAEQSAEVTAGAIVAYCPQSQATAADLTGPAYQNTLSDLQAIEGKLQGIEGDLQGIQRDLDNIPGHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16703; Mature: 16703
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFFVHQRDSTAPATEPAPSAAPPKAAAPKPPAPRIEMADMAFIAALKHEGVPVPSQDYV CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH MKQGHAVCDFLAQQHNFADAIGFVQRSSIWNAEQSAEVTAGAIVAYCPQSQATAADLTGP HHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHCEEEEECCCCCCCHHHCCCH AYQNTLSDLQAIEGKLQGIEGDLQGIQRDLDNIPGHR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIFFVHQRDSTAPATEPAPSAAPPKAAAPKPPAPRIEMADMAFIAALKHEGVPVPSQDYV CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH MKQGHAVCDFLAQQHNFADAIGFVQRSSIWNAEQSAEVTAGAIVAYCPQSQATAADLTGP HHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHCEEEEECCCCCCCHHHCCCH AYQNTLSDLQAIEGKLQGIEGDLQGIQRDLDNIPGHR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA