| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406664
Identifier: 41406664
GI number: 41406664
Start: 590339
End: 591403
Strand: Direct
Name: 41406664
Synonym: MAP0566
Alternate gene names: NA
Gene position: 590339-591403 (Clockwise)
Preceding gene: 41406663
Following gene: 41406665
Centisome position: 12.22
GC content: 67.23
Gene sequence:
>1065_bases TTGTCAAGTAACGCACCGCGTGAGCGCGATCCACTGCGCACCGGCATCTTCGGTGTGGTGCTGGTGGTGTGCGTCGTGCT CATCGCGTTCGGTTACGCCGGATTGCCGTTCTGGCCACAGGGCAAGATCTACGACGCCTACTTCACCGACGCCGGCGGCA TCAATCCCGGTAACGCCGTGTACGTTTCGGGCCTCAAGGTCGGCAAGGTGACCGACGTCGGCCTGGCCGGCGACAGCGCC AAGATCAGCTTCAGCGTCGACCGGCACGTGGCCGTCGGCGACCAGTCGCTAGCCGCCATCCGCACCGACACCATCCTCGG CGAACGCTCCATCGCGGTGACCCCGGCCGGCGGCGGCAAGGCCACCACCATCCCGCTGAGCCGGACCACGACCCCCTACA CGCTGGCCGGTGCGCTCGAGGACTTGGGATCCAACGCCAGCAACCTGAACAAGCCCCAGTTCGAGCAGGCGCTGCACGTG CTGACCGACACCCTGCACGACGCCACCCCGGAGCTGCGCGGCGCGCTGGACGGTGTGACCTCGCTGTCGCGCACCCTGGA CCGCCGCGACGAGGCGCTGCAAAGCCTGCTGGCGCACGCGAAGTCGGTCACCGGTGTGCTGTCCCAGCGCGCCGAACAGG TCAACAAGCTGGTCGACGACGGCAACGAGTTGTTCGCCGCGCTCGACGAGCGGCGGGCCGCCCTCGGCCGGCTGATCTCG GGGATTCAAGGCCTGTCGGCGCAGATCTCGGGCTTCGTCGCCGACAACCGCAAGGAATTCGGCCCGGCGCTGAACAAGCT CAACGACGTGCTGGCCAACCTCAACGAGCGACGCGACTACATCACCGAGGCCCTCAAGCGGCTGCCCACCTACGCCACCG AGCTGGGCGAGGTGGTCGGCTCCGGTCCCGGGTTCAACGTGAACGTCTACGGTGTCATCCCGGCGCCGCTGCTGGCGACG ATGTTCGACTTCTTCTATCAGCCGGGCAAGATGCCGGCCAGCCTGGCCGACTACCTGCGCGGCCTGATTCAGGAACGCTG GATCATCAGGCCGAAGTCACCATGA
Upstream 100 bases:
>100_bases TACTTCTGTTCCGTGACGATCAAGATCAACGGCCCGGCCGGTAGCGACATCTTGCTGCCGCTCGGCGGCCAGGTGGATCC CAGCAAGGGGAGGTGCGCTT
Downstream 100 bases:
>100_bases TGCAGCGGTTGGCCGGCAGCAGGGGGCTGCGCTACACCACCATCATCGCGCTGGTCGCGGTGTTGGTGGGTGGCGTGTAT GTGCTGACGTCGCAAGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family C; MCE Family Protein; MCE-Family Protein; MCE-Family B; Mce Family C; Mammalian Cell Entry Related Domain Protein; Mce-Related Protein; Mce Family B; Mce-Family C; Mce Related Protein; Mce Family Protein Mce5B; MCE-Family; Virulence Factor MCE-Like Protein; MCE-Family D; Mce Family Protein Mce5C
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSSNAPRERDPLRTGIFGVVLVVCVVLIAFGYAGLPFWPQGKIYDAYFTDAGGINPGNAVYVSGLKVGKVTDVGLAGDSA KISFSVDRHVAVGDQSLAAIRTDTILGERSIAVTPAGGGKATTIPLSRTTTPYTLAGALEDLGSNASNLNKPQFEQALHV LTDTLHDATPELRGALDGVTSLSRTLDRRDEALQSLLAHAKSVTGVLSQRAEQVNKLVDDGNELFAALDERRAALGRLIS GIQGLSAQISGFVADNRKEFGPALNKLNDVLANLNERRDYITEALKRLPTYATELGEVVGSGPGFNVNVYGVIPAPLLAT MFDFFYQPGKMPASLADYLRGLIQERWIIRPKSP
Sequences:
>Translated_354_residues MSSNAPRERDPLRTGIFGVVLVVCVVLIAFGYAGLPFWPQGKIYDAYFTDAGGINPGNAVYVSGLKVGKVTDVGLAGDSA KISFSVDRHVAVGDQSLAAIRTDTILGERSIAVTPAGGGKATTIPLSRTTTPYTLAGALEDLGSNASNLNKPQFEQALHV LTDTLHDATPELRGALDGVTSLSRTLDRRDEALQSLLAHAKSVTGVLSQRAEQVNKLVDDGNELFAALDERRAALGRLIS GIQGLSAQISGFVADNRKEFGPALNKLNDVLANLNERRDYITEALKRLPTYATELGEVVGSGPGFNVNVYGVIPAPLLAT MFDFFYQPGKMPASLADYLRGLIQERWIIRPKSP >Mature_353_residues SSNAPRERDPLRTGIFGVVLVVCVVLIAFGYAGLPFWPQGKIYDAYFTDAGGINPGNAVYVSGLKVGKVTDVGLAGDSAK ISFSVDRHVAVGDQSLAAIRTDTILGERSIAVTPAGGGKATTIPLSRTTTPYTLAGALEDLGSNASNLNKPQFEQALHVL TDTLHDATPELRGALDGVTSLSRTLDRRDEALQSLLAHAKSVTGVLSQRAEQVNKLVDDGNELFAALDERRAALGRLISG IQGLSAQISGFVADNRKEFGPALNKLNDVLANLNERRDYITEALKRLPTYATELGEVVGSGPGFNVNVYGVIPAPLLATM FDFFYQPGKMPASLADYLRGLIQERWIIRPKSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37808; Mature: 37677
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNAPRERDPLRTGIFGVVLVVCVVLIAFGYAGLPFWPQGKIYDAYFTDAGGINPGNAV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEE YVSGLKVGKVTDVGLAGDSAKISFSVDRHVAVGDQSLAAIRTDTILGERSIAVTPAGGGK EEECEEECCEEECCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCC ATTIPLSRTTTPYTLAGALEDLGSNASNLNKPQFEQALHVLTDTLHDATPELRGALDGVT EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SLSRTLDRRDEALQSLLAHAKSVTGVLSQRAEQVNKLVDDGNELFAALDERRAALGRLIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH GIQGLSAQISGFVADNRKEFGPALNKLNDVLANLNERRDYITEALKRLPTYATELGEVVG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC SGPGFNVNVYGVIPAPLLATMFDFFYQPGKMPASLADYLRGLIQERWIIRPKSP CCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SSNAPRERDPLRTGIFGVVLVVCVVLIAFGYAGLPFWPQGKIYDAYFTDAGGINPGNAV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEE YVSGLKVGKVTDVGLAGDSAKISFSVDRHVAVGDQSLAAIRTDTILGERSIAVTPAGGGK EEECEEECCEEECCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCC ATTIPLSRTTTPYTLAGALEDLGSNASNLNKPQFEQALHVLTDTLHDATPELRGALDGVT EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SLSRTLDRRDEALQSLLAHAKSVTGVLSQRAEQVNKLVDDGNELFAALDERRAALGRLIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH GIQGLSAQISGFVADNRKEFGPALNKLNDVLANLNERRDYITEALKRLPTYATELGEVVG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC SGPGFNVNVYGVIPAPLLATMFDFFYQPGKMPASLADYLRGLIQERWIIRPKSP CCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA