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The map label for this gene is kstR2 [H]

Identifier: 41406607

GI number: 41406607

Start: 537044

End: 537652

Strand: Direct

Name: kstR2 [H]

Synonym: MAP0509

Alternate gene names: 41406607

Gene position: 537044-537652 (Clockwise)

Preceding gene: 41406606

Following gene: 41406608

Centisome position: 11.12

GC content: 64.53

Gene sequence:

>609_bases
GTGGACCGAGTGACCGGTCCGGCCAACAGCCGGCGAGACGAGTTGCTGGAGCTGGCCGCGGCCATGTTCGCCGAGCGCGG
ATTGCGTGCCACCACGGTGCGCGACATCGCCGACAGCGCCGGGATCCTGTCCGGCAGCCTGTATCACCACTTCTCCTCCA
AGGAGGAGATGGTCGACGAGGTGCTGCGCAGCTTCCTGGACTGGTTGTTCGCCCGCTATCGCGAAATCATCGACAGCGAG
AGTAACCCGCTGGAGCGGCTCAAGGGCCTGTTCATGGCGTCGTTCGAGGCGATCGAGCACCGGCACGCGCAGGTCGTCAT
CTATCAGGACGAGGCCAAACGGCTGCTGTCGCAGCCGCGGTTCTCCTACATCGAGGACATGAACCGCCAGCAACGCAAGA
TGTGGCTCGAGGTGCTCAACCAGGGCGTCGACGAGGGCTACTTCCGGCCCGACCTCGACGTCGACCTCGTCTACCGATTC
ATCCGGGACACCACCTGGGTGTCGGTGCGCTGGTATCAGCCCGGCGGACCGCTCACCGCCGAGCAAGTGGGTCAGCAGTA
CCTCGCCATCGTGTTGGGCGGGATCACGGTGGACGCGAAGAAAGACTAA

Upstream 100 bases:

>100_bases
TCATCTCGGTGTCCAGCCAGCATCCATGAGCCGGCGTGGTCGGCCGGGACCGGCGCCCCTCCCGCTGGCCAAGCAAGCGC
TTGGTTGATACTCTGTCCGG

Downstream 100 bases:

>100_bases
CGAAGGAGTCTGAAAATGCCTGAGGCGTACGTCATCGACGCTGTACGCACCGCGGTCGGCAAGCGCGGTGGATCGCTGGC
CGGAATCCATCCGGTCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MDRVTGPANSRRDELLELAAAMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMVDEVLRSFLDWLFARYREIIDSE
SNPLERLKGLFMASFEAIEHRHAQVVIYQDEAKRLLSQPRFSYIEDMNRQQRKMWLEVLNQGVDEGYFRPDLDVDLVYRF
IRDTTWVSVRWYQPGGPLTAEQVGQQYLAIVLGGITVDAKKD

Sequences:

>Translated_202_residues
MDRVTGPANSRRDELLELAAAMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMVDEVLRSFLDWLFARYREIIDSE
SNPLERLKGLFMASFEAIEHRHAQVVIYQDEAKRLLSQPRFSYIEDMNRQQRKMWLEVLNQGVDEGYFRPDLDVDLVYRF
IRDTTWVSVRWYQPGGPLTAEQVGQQYLAIVLGGITVDAKKD
>Mature_202_residues
MDRVTGPANSRRDELLELAAAMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMVDEVLRSFLDWLFARYREIIDSE
SNPLERLKGLFMASFEAIEHRHAQVVIYQDEAKRLLSQPRFSYIEDMNRQQRKMWLEVLNQGVDEGYFRPDLDVDLVYRF
IRDTTWVSVRWYQPGGPLTAEQVGQQYLAIVLGGITVDAKKD

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23350; Mature: 23350

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRVTGPANSRRDELLELAAAMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMVDE
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCHHHHHCCCHHHHHHH
VLRSFLDWLFARYREIIDSESNPLERLKGLFMASFEAIEHRHAQVVIYQDEAKRLLSQPR
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCC
FSYIEDMNRQQRKMWLEVLNQGVDEGYFRPDLDVDLVYRFIRDTTWVSVRWYQPGGPLTA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCH
EQVGQQYLAIVLGGITVDAKKD
HHHHHHHHHHHHHCEEECCCCC
>Mature Secondary Structure
MDRVTGPANSRRDELLELAAAMFAERGLRATTVRDIADSAGILSGSLYHHFSSKEEMVDE
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCHHHHHCCCHHHHHHH
VLRSFLDWLFARYREIIDSESNPLERLKGLFMASFEAIEHRHAQVVIYQDEAKRLLSQPR
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCC
FSYIEDMNRQQRKMWLEVLNQGVDEGYFRPDLDVDLVYRFIRDTTWVSVRWYQPGGPLTA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCH
EQVGQQYLAIVLGGITVDAKKD
HHHHHHHHHHHHHCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]