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The map label for this gene is trbB

Identifier: 41406514

GI number: 41406514

Start: 441163

End: 442221

Strand: Direct

Name: trbB

Synonym: MAP0416

Alternate gene names: 41406514

Gene position: 441163-442221 (Clockwise)

Preceding gene: 41406513

Following gene: 41406515

Centisome position: 9.13

GC content: 74.6

Gene sequence:

>1059_bases
ATGCTCGGTGACACCGAGGTGCTGGCCAACCTGCGCACCCTGCAGACCGAGCTCACCGGCGCCGGCATCCTGGAACCGCT
GCTGTGCGCGGACGGCACCACCGACGTGTTGGTGACCGCGCCGGACGCGGTCTGGGTGGACGACGGTAACGGCTTGCGGC
GCAGCGAGATTCGCTTTCCCGACGAGGCCGCGGTGCGCCGGTTGGCGCAGCGGCTGGCGCTGGCGGCCGGCCGGCGTCTG
GACGACGCGCAACCGTGGGTGGACGGCGAGCTGACCGGCATCGGCGCCGGCGGGTTCGCGGTGCGGCTGCACGCGGTGCT
GCCGCCGGTGGCGGCCGCCGGCACCTGCCTGTCGCTGCGGGTGCTGCGGCCGGCCAGCCAGGACCTGGCGGCGCTGAGCG
CCGCGGGCGCGATCGAGCCGGCCGCCGCGGCGCTGGTCGCCGACATCATCGCCGCGCGGTTGGCGTTTTTGGTGAGCGGG
GGAACCGGCGCCGGCAAGACAACGCTGCTGGCCGCCATGCTGGGCGCGGTACCGCCGGACGAACGGATCGTCTGCGTCGA
GGACGCCGCCGAATTGGCGCCGCCGCACCCGCATCTGGTGAAGCTGGTCGCACGGTGCGCCAACGTCGAAGGCGTCGGCG
AGGTCCCGGTGCGCCAGCTGGTCCGCCAGGCGTTACGGATGCGGCCCGACCGCATCGTGGTCGGCGAGGTCCGCGGCGCC
GAGGTGGTGGACCTGCTGGCCGCGCTGAACACCGGGCACGACGGCGGCGCGGGCACCGTGCACGCCAACAACCCCGGCGA
GGTGCCGGCCCGGCTGGAGGCCCTCGGTGCGCTCGGCGGGCTCGACCGTGCCGCGCTGCACAGCCAACTCGCCGCCGCCG
TGCAGGTGCTGCTGCACGTCGAGCGCAACCGTGCCGGCCGGCGGCGACTCAGCGAAATCGCCGTGCTGCAACGGGTTCAG
GAACGGGTGCGCTCCGTCACGGTGTGGCACGCCGACCGGGGGATGACCGAGGCCGCCCCGCTGCTGCGGCGGGTGCTGGA
AAACCGGATGCCGTCATGA

Upstream 100 bases:

>100_bases
CGACCGGGTCCGCGAGCGGCTGGCCGGCGAAACCGTGCCGCTGGGCGCCCCGCTGCCCGCGTCGGTGGTGGCCGCCGCGA
TCCGGGCCGAGTCCGGCGGG

Downstream 100 bases:

>100_bases
CCGGGCCGGTGGCGGGTGCGTTGCTGCTGGCGGTTGCCCTCGTCGTCGGGCCGCCCTCGCCGCGGCGCCGGCTGGGCGTG
GCGGTGTCGGGCAGCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MLGDTEVLANLRTLQTELTGAGILEPLLCADGTTDVLVTAPDAVWVDDGNGLRRSEIRFPDEAAVRRLAQRLALAAGRRL
DDAQPWVDGELTGIGAGGFAVRLHAVLPPVAAAGTCLSLRVLRPASQDLAALSAAGAIEPAAAALVADIIAARLAFLVSG
GTGAGKTTLLAAMLGAVPPDERIVCVEDAAELAPPHPHLVKLVARCANVEGVGEVPVRQLVRQALRMRPDRIVVGEVRGA
EVVDLLAALNTGHDGGAGTVHANNPGEVPARLEALGALGGLDRAALHSQLAAAVQVLLHVERNRAGRRRLSEIAVLQRVQ
ERVRSVTVWHADRGMTEAAPLLRRVLENRMPS

Sequences:

>Translated_352_residues
MLGDTEVLANLRTLQTELTGAGILEPLLCADGTTDVLVTAPDAVWVDDGNGLRRSEIRFPDEAAVRRLAQRLALAAGRRL
DDAQPWVDGELTGIGAGGFAVRLHAVLPPVAAAGTCLSLRVLRPASQDLAALSAAGAIEPAAAALVADIIAARLAFLVSG
GTGAGKTTLLAAMLGAVPPDERIVCVEDAAELAPPHPHLVKLVARCANVEGVGEVPVRQLVRQALRMRPDRIVVGEVRGA
EVVDLLAALNTGHDGGAGTVHANNPGEVPARLEALGALGGLDRAALHSQLAAAVQVLLHVERNRAGRRRLSEIAVLQRVQ
ERVRSVTVWHADRGMTEAAPLLRRVLENRMPS
>Mature_352_residues
MLGDTEVLANLRTLQTELTGAGILEPLLCADGTTDVLVTAPDAVWVDDGNGLRRSEIRFPDEAAVRRLAQRLALAAGRRL
DDAQPWVDGELTGIGAGGFAVRLHAVLPPVAAAGTCLSLRVLRPASQDLAALSAAGAIEPAAAALVADIIAARLAFLVSG
GTGAGKTTLLAAMLGAVPPDERIVCVEDAAELAPPHPHLVKLVARCANVEGVGEVPVRQLVRQALRMRPDRIVVGEVRGA
EVVDLLAALNTGHDGGAGTVHANNPGEVPARLEALGALGGLDRAALHSQLAAAVQVLLHVERNRAGRRRLSEIAVLQRVQ
ERVRSVTVWHADRGMTEAAPLLRRVLENRMPS

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 36823; Mature: 36823

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGDTEVLANLRTLQTELTGAGILEPLLCADGTTDVLVTAPDAVWVDDGNGLRRSEIRFP
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCCCCCC
DEAAVRRLAQRLALAAGRRLDDAQPWVDGELTGIGAGGFAVRLHAVLPPVAAAGTCLSLR
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHEEHHHHHCCHHHCCCHHEEE
VLRPASQDLAALSAAGAIEPAAAALVADIIAARLAFLVSGGTGAGKTTLLAAMLGAVPPD
EECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
ERIVCVEDAAELAPPHPHLVKLVARCANVEGVGEVPVRQLVRQALRMRPDRIVVGEVRGA
CCEEEECCHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCH
EVVDLLAALNTGHDGGAGTVHANNPGEVPARLEALGALGGLDRAALHSQLAAAVQVLLHV
HHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ERNRAGRRRLSEIAVLQRVQERVRSVTVWHADRGMTEAAPLLRRVLENRMPS
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLGDTEVLANLRTLQTELTGAGILEPLLCADGTTDVLVTAPDAVWVDDGNGLRRSEIRFP
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCCCCCC
DEAAVRRLAQRLALAAGRRLDDAQPWVDGELTGIGAGGFAVRLHAVLPPVAAAGTCLSLR
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHEEHHHHHCCHHHCCCHHEEE
VLRPASQDLAALSAAGAIEPAAAALVADIIAARLAFLVSGGTGAGKTTLLAAMLGAVPPD
EECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
ERIVCVEDAAELAPPHPHLVKLVARCANVEGVGEVPVRQLVRQALRMRPDRIVVGEVRGA
CCEEEECCHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCH
EVVDLLAALNTGHDGGAGTVHANNPGEVPARLEALGALGGLDRAALHSQLAAAVQVLLHV
HHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ERNRAGRRRLSEIAVLQRVQERVRSVTVWHADRGMTEAAPLLRRVLENRMPS
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]