Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41406468

Identifier: 41406468

GI number: 41406468

Start: 396564

End: 397649

Strand: Direct

Name: 41406468

Synonym: MAP0370

Alternate gene names: NA

Gene position: 396564-397649 (Clockwise)

Preceding gene: 41406467

Following gene: 41406469

Centisome position: 8.21

GC content: 76.06

Gene sequence:

>1086_bases
GTGAGCACCTCGGAATTCGACAGTTTCCGGCCGCCTGAACCGGCGGGCGGCAAGCGCCGCAAAGACAAGCGCGGCGGCCG
GCGCGGGGCGGGCGACGGCTCCCGCGAGATGCCGATGGTGCCCGAGGCCGAGTTCAGCTCGTACTACGGGCGCCCGGTGG
TCAAGCCGGCGCCGTGGGGCCACGAGGTGGGGGCGTACCTGTTCCTGGGCGGCGTCGCCGGCGGCTCCGGGCTGCTGGCG
GCCGGCGCCCAGCTGACCGGCCGGGACACGCTGCGCCGCAACACCCGGCTGACCGCCCTGGCCGCGGTGCTGCTCAGCCT
GGTCGCGCTGGTGAAGGACCTGGGCCGGCCCGAGCGGTTCCTGAACATGTTGCGCACCGTCAAGCTGACCTCGCCGATGA
ACCTGGGCTCGTGGATTCTCAGCGCGTTCAGCGCCGGGATCTCGGTGGCCGCCGCCGCCGAGGTGGACCGGATGACCGGG
CAGCGGCTCCCGCTGGGGCCGCTGCGCCCGGTGCTGCGCGCCGCCGAGGGACCGGCCGGCCTTCAGGCGGCGGTGCTGGC
GCCGCCGCTGGCCGTCTACACCGCCGTGCTGCTGGCCGACACCGCCACCCCGACCTGGAACGCCGCCCACGAGGACCTGC
CGTTCGTGTTCGTCAGCTCAGCGAGCCTGGCCGCGTCGGGGCTGGCGATGGTGACCACGCCGGTGCACCAGGCCGGCCCG
GCCCGCACGCTGGCCGTGCTCGGTGCGCTCGGCGACCTGGCGGCCAGCAAGGTCATGGAGCGGCGGATGGACCCGGTCGC
CGCCGAACCCCTGCACACCGGCGGGCCCGGCCGGATGCTGCGGGCCAGCGAACGCCTGGTGATCGCCGGCGGGCTGGGCA
CCCTGCTGGGCGGGCGGCACCGGGCGGTCGCGGTGGTCAGCGGCCTGGCGTTGGCGACGGCCTCGGCGCTGACCCGGTTC
GGGGTGTTCGAGGCCGGGCTGGAGTCCGCCCGCCACCCCCGCTACACCATCGAGCCGCAGCAGCGCCGGCTGGCCGCCCG
CCGCGCGGCCGGGATCACGTCGGACTCCATCACCACCGCGGGCTGA

Upstream 100 bases:

>100_bases
CGCGGGTGTGCACCGCCGACCTGACGACCATGTTCAAGCGGGCCGGGCTGGCCGCGGCCGGCATGGTCGGGGCGGCCGTG
CTGGCGTTTTGGAGGAGCCG

Downstream 100 bases:

>100_bases
GCGCGCCCGCGTCGTTTGCCCTCGGTGCAGCCGGGTATCCCGGTGCGCATGACGAATTTTGGCTACACTTTGATGACCGA
GCAGAGTGGACCCAAAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Formate-Dependent Nitrite Reductase Membrane Component; Polysulphide Reductase Subunit C Nrfd

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MSTSEFDSFRPPEPAGGKRRKDKRGGRRGAGDGSREMPMVPEAEFSSYYGRPVVKPAPWGHEVGAYLFLGGVAGGSGLLA
AGAQLTGRDTLRRNTRLTALAAVLLSLVALVKDLGRPERFLNMLRTVKLTSPMNLGSWILSAFSAGISVAAAAEVDRMTG
QRLPLGPLRPVLRAAEGPAGLQAAVLAPPLAVYTAVLLADTATPTWNAAHEDLPFVFVSSASLAASGLAMVTTPVHQAGP
ARTLAVLGALGDLAASKVMERRMDPVAAEPLHTGGPGRMLRASERLVIAGGLGTLLGGRHRAVAVVSGLALATASALTRF
GVFEAGLESARHPRYTIEPQQRRLAARRAAGITSDSITTAG

Sequences:

>Translated_361_residues
MSTSEFDSFRPPEPAGGKRRKDKRGGRRGAGDGSREMPMVPEAEFSSYYGRPVVKPAPWGHEVGAYLFLGGVAGGSGLLA
AGAQLTGRDTLRRNTRLTALAAVLLSLVALVKDLGRPERFLNMLRTVKLTSPMNLGSWILSAFSAGISVAAAAEVDRMTG
QRLPLGPLRPVLRAAEGPAGLQAAVLAPPLAVYTAVLLADTATPTWNAAHEDLPFVFVSSASLAASGLAMVTTPVHQAGP
ARTLAVLGALGDLAASKVMERRMDPVAAEPLHTGGPGRMLRASERLVIAGGLGTLLGGRHRAVAVVSGLALATASALTRF
GVFEAGLESARHPRYTIEPQQRRLAARRAAGITSDSITTAG
>Mature_360_residues
STSEFDSFRPPEPAGGKRRKDKRGGRRGAGDGSREMPMVPEAEFSSYYGRPVVKPAPWGHEVGAYLFLGGVAGGSGLLAA
GAQLTGRDTLRRNTRLTALAAVLLSLVALVKDLGRPERFLNMLRTVKLTSPMNLGSWILSAFSAGISVAAAAEVDRMTGQ
RLPLGPLRPVLRAAEGPAGLQAAVLAPPLAVYTAVLLADTATPTWNAAHEDLPFVFVSSASLAASGLAMVTTPVHQAGPA
RTLAVLGALGDLAASKVMERRMDPVAAEPLHTGGPGRMLRASERLVIAGGLGTLLGGRHRAVAVVSGLALATASALTRFG
VFEAGLESARHPRYTIEPQQRRLAARRAAGITSDSITTAG

Specific function: Unknown

COG id: COG3301

COG function: function code P; Formate-dependent nitrite reductase, membrane component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37517; Mature: 37386

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSEFDSFRPPEPAGGKRRKDKRGGRRGAGDGSREMPMVPEAEFSSYYGRPVVKPAPWG
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
HEVGAYLFLGGVAGGSGLLAAGAQLTGRDTLRRNTRLTALAAVLLSLVALVKDLGRPERF
HHHCCEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LNMLRTVKLTSPMNLGSWILSAFSAGISVAAAAEVDRMTGQRLPLGPLRPVLRAAEGPAG
HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC
LQAAVLAPPLAVYTAVLLADTATPTWNAAHEDLPFVFVSSASLAASGLAMVTTPVHQAGP
CCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHCCCEEEECCHHHCCC
ARTLAVLGALGDLAASKVMERRMDPVAAEPLHTGGPGRMLRASERLVIAGGLGTLLGGRH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEECCHHHHHCCCH
RAVAVVSGLALATASALTRFGVFEAGLESARHPRYTIEPQQRRLAARRAAGITSDSITTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
G
C
>Mature Secondary Structure 
STSEFDSFRPPEPAGGKRRKDKRGGRRGAGDGSREMPMVPEAEFSSYYGRPVVKPAPWG
CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
HEVGAYLFLGGVAGGSGLLAAGAQLTGRDTLRRNTRLTALAAVLLSLVALVKDLGRPERF
HHHCCEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LNMLRTVKLTSPMNLGSWILSAFSAGISVAAAAEVDRMTGQRLPLGPLRPVLRAAEGPAG
HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC
LQAAVLAPPLAVYTAVLLADTATPTWNAAHEDLPFVFVSSASLAASGLAMVTTPVHQAGP
CCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHCCCEEEECCHHHCCC
ARTLAVLGALGDLAASKVMERRMDPVAAEPLHTGGPGRMLRASERLVIAGGLGTLLGGRH
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEECCHHHHHCCCH
RAVAVVSGLALATASALTRFGVFEAGLESARHPRYTIEPQQRRLAARRAAGITSDSITTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA