| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406468
Identifier: 41406468
GI number: 41406468
Start: 396564
End: 397649
Strand: Direct
Name: 41406468
Synonym: MAP0370
Alternate gene names: NA
Gene position: 396564-397649 (Clockwise)
Preceding gene: 41406467
Following gene: 41406469
Centisome position: 8.21
GC content: 76.06
Gene sequence:
>1086_bases GTGAGCACCTCGGAATTCGACAGTTTCCGGCCGCCTGAACCGGCGGGCGGCAAGCGCCGCAAAGACAAGCGCGGCGGCCG GCGCGGGGCGGGCGACGGCTCCCGCGAGATGCCGATGGTGCCCGAGGCCGAGTTCAGCTCGTACTACGGGCGCCCGGTGG TCAAGCCGGCGCCGTGGGGCCACGAGGTGGGGGCGTACCTGTTCCTGGGCGGCGTCGCCGGCGGCTCCGGGCTGCTGGCG GCCGGCGCCCAGCTGACCGGCCGGGACACGCTGCGCCGCAACACCCGGCTGACCGCCCTGGCCGCGGTGCTGCTCAGCCT GGTCGCGCTGGTGAAGGACCTGGGCCGGCCCGAGCGGTTCCTGAACATGTTGCGCACCGTCAAGCTGACCTCGCCGATGA ACCTGGGCTCGTGGATTCTCAGCGCGTTCAGCGCCGGGATCTCGGTGGCCGCCGCCGCCGAGGTGGACCGGATGACCGGG CAGCGGCTCCCGCTGGGGCCGCTGCGCCCGGTGCTGCGCGCCGCCGAGGGACCGGCCGGCCTTCAGGCGGCGGTGCTGGC GCCGCCGCTGGCCGTCTACACCGCCGTGCTGCTGGCCGACACCGCCACCCCGACCTGGAACGCCGCCCACGAGGACCTGC CGTTCGTGTTCGTCAGCTCAGCGAGCCTGGCCGCGTCGGGGCTGGCGATGGTGACCACGCCGGTGCACCAGGCCGGCCCG GCCCGCACGCTGGCCGTGCTCGGTGCGCTCGGCGACCTGGCGGCCAGCAAGGTCATGGAGCGGCGGATGGACCCGGTCGC CGCCGAACCCCTGCACACCGGCGGGCCCGGCCGGATGCTGCGGGCCAGCGAACGCCTGGTGATCGCCGGCGGGCTGGGCA CCCTGCTGGGCGGGCGGCACCGGGCGGTCGCGGTGGTCAGCGGCCTGGCGTTGGCGACGGCCTCGGCGCTGACCCGGTTC GGGGTGTTCGAGGCCGGGCTGGAGTCCGCCCGCCACCCCCGCTACACCATCGAGCCGCAGCAGCGCCGGCTGGCCGCCCG CCGCGCGGCCGGGATCACGTCGGACTCCATCACCACCGCGGGCTGA
Upstream 100 bases:
>100_bases CGCGGGTGTGCACCGCCGACCTGACGACCATGTTCAAGCGGGCCGGGCTGGCCGCGGCCGGCATGGTCGGGGCGGCCGTG CTGGCGTTTTGGAGGAGCCG
Downstream 100 bases:
>100_bases GCGCGCCCGCGTCGTTTGCCCTCGGTGCAGCCGGGTATCCCGGTGCGCATGACGAATTTTGGCTACACTTTGATGACCGA GCAGAGTGGACCCAAAGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Formate-Dependent Nitrite Reductase Membrane Component; Polysulphide Reductase Subunit C Nrfd
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSTSEFDSFRPPEPAGGKRRKDKRGGRRGAGDGSREMPMVPEAEFSSYYGRPVVKPAPWGHEVGAYLFLGGVAGGSGLLA AGAQLTGRDTLRRNTRLTALAAVLLSLVALVKDLGRPERFLNMLRTVKLTSPMNLGSWILSAFSAGISVAAAAEVDRMTG QRLPLGPLRPVLRAAEGPAGLQAAVLAPPLAVYTAVLLADTATPTWNAAHEDLPFVFVSSASLAASGLAMVTTPVHQAGP ARTLAVLGALGDLAASKVMERRMDPVAAEPLHTGGPGRMLRASERLVIAGGLGTLLGGRHRAVAVVSGLALATASALTRF GVFEAGLESARHPRYTIEPQQRRLAARRAAGITSDSITTAG
Sequences:
>Translated_361_residues MSTSEFDSFRPPEPAGGKRRKDKRGGRRGAGDGSREMPMVPEAEFSSYYGRPVVKPAPWGHEVGAYLFLGGVAGGSGLLA AGAQLTGRDTLRRNTRLTALAAVLLSLVALVKDLGRPERFLNMLRTVKLTSPMNLGSWILSAFSAGISVAAAAEVDRMTG QRLPLGPLRPVLRAAEGPAGLQAAVLAPPLAVYTAVLLADTATPTWNAAHEDLPFVFVSSASLAASGLAMVTTPVHQAGP ARTLAVLGALGDLAASKVMERRMDPVAAEPLHTGGPGRMLRASERLVIAGGLGTLLGGRHRAVAVVSGLALATASALTRF GVFEAGLESARHPRYTIEPQQRRLAARRAAGITSDSITTAG >Mature_360_residues STSEFDSFRPPEPAGGKRRKDKRGGRRGAGDGSREMPMVPEAEFSSYYGRPVVKPAPWGHEVGAYLFLGGVAGGSGLLAA GAQLTGRDTLRRNTRLTALAAVLLSLVALVKDLGRPERFLNMLRTVKLTSPMNLGSWILSAFSAGISVAAAAEVDRMTGQ RLPLGPLRPVLRAAEGPAGLQAAVLAPPLAVYTAVLLADTATPTWNAAHEDLPFVFVSSASLAASGLAMVTTPVHQAGPA RTLAVLGALGDLAASKVMERRMDPVAAEPLHTGGPGRMLRASERLVIAGGLGTLLGGRHRAVAVVSGLALATASALTRFG VFEAGLESARHPRYTIEPQQRRLAARRAAGITSDSITTAG
Specific function: Unknown
COG id: COG3301
COG function: function code P; Formate-dependent nitrite reductase, membrane component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37517; Mature: 37386
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSEFDSFRPPEPAGGKRRKDKRGGRRGAGDGSREMPMVPEAEFSSYYGRPVVKPAPWG CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC HEVGAYLFLGGVAGGSGLLAAGAQLTGRDTLRRNTRLTALAAVLLSLVALVKDLGRPERF HHHCCEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LNMLRTVKLTSPMNLGSWILSAFSAGISVAAAAEVDRMTGQRLPLGPLRPVLRAAEGPAG HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC LQAAVLAPPLAVYTAVLLADTATPTWNAAHEDLPFVFVSSASLAASGLAMVTTPVHQAGP CCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHCCCEEEECCHHHCCC ARTLAVLGALGDLAASKVMERRMDPVAAEPLHTGGPGRMLRASERLVIAGGLGTLLGGRH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEECCHHHHHCCCH RAVAVVSGLALATASALTRFGVFEAGLESARHPRYTIEPQQRRLAARRAAGITSDSITTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC G C >Mature Secondary Structure STSEFDSFRPPEPAGGKRRKDKRGGRRGAGDGSREMPMVPEAEFSSYYGRPVVKPAPWG CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC HEVGAYLFLGGVAGGSGLLAAGAQLTGRDTLRRNTRLTALAAVLLSLVALVKDLGRPERF HHHCCEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LNMLRTVKLTSPMNLGSWILSAFSAGISVAAAAEVDRMTGQRLPLGPLRPVLRAAEGPAG HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC LQAAVLAPPLAVYTAVLLADTATPTWNAAHEDLPFVFVSSASLAASGLAMVTTPVHQAGP CCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHCCCEEEECCHHHCCC ARTLAVLGALGDLAASKVMERRMDPVAAEPLHTGGPGRMLRASERLVIAGGLGTLLGGRH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEECCHHHHHCCCH RAVAVVSGLALATASALTRFGVFEAGLESARHPRYTIEPQQRRLAARRAAGITSDSITTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA