| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406455
Identifier: 41406455
GI number: 41406455
Start: 381240
End: 382232
Strand: Direct
Name: 41406455
Synonym: MAP0357
Alternate gene names: NA
Gene position: 381240-382232 (Clockwise)
Preceding gene: 41406453
Following gene: 41406461
Centisome position: 7.89
GC content: 69.49
Gene sequence:
>993_bases GTGGACGTCGATGCCTTCGTGCTGGCCCATCGCCCGACCTGGGACCGCCTGGACCGCTTGGTCGGGCGGCGCCGGTCGCT GTCCGGCGCCGAGATCGATGAGCTGGTCGAGCTTTACCAGCGGGTGTCCACCCACCTGTCGATGCTGCGCTCGGCGTCCT CGGATTCGATGCTGGTCGGCCGGTTGTCCAGTCTGGTGGCGCGGGCCCGCTCGGCGGTGACCGCCGCCCACGCCCCGCTG AGCAGCACCTTCGTCCGGTTCTGGACGGTGTCGTTCCCCGTCGTCGCCTACCGGTCCTGGCGGTGGTGGGTGGCCACCGG GGCGGCGTTCTTCGCGGTGGTGGTGATCGTCGCGCTGTGGGTGGCCGGCAACCCCGAGGTGCAGTCGGCGCTCGGAACTC CAAGCGACATCGACCAATTGGTCAATCACGACGTCGAGTCGTATTACAGCGAGCATCCCGCCGCCGCGTTCGCGCTGCAG ATCTGGGTGAACAACTCCTGGGTTTCGGCCCAGTGCATCGCGCTGTCGGTGGTGCTGGGATTGCCGATTCCTTTGGTGCT GTTCGAGAACGCCGCCAACCTGGGGGTGATCGCCGGGCTGATGTTCCCGGCCGGCAAGGGCGGGCTGCTGCTGGGTCTGC TTGCCCCGCACGGGTTGCTGGAGCTCACTGCGGTATTCCTTGCCGGGGCAACGGGAATGCGGCTGGGCTGGTCGGTGATC TCGCCGGGCGACCGTCCCCGCGGGCAGGTGCTCGCCGAACAGGGCCGCGCCGTCGTGTCGGTGGCGGTGGGCCTGGTGGC GGTGCTGCTGGTGTCCGGGTTGATCGAAGCGCTGGTGACGCCGTCGCCGCTGCCGACGTTCGTGCGGGTCGGCATCGGCG TCGTCGCCGAGGCGGCGTTCCTGTGTTACATCGGCTACTTCGGCCGCCGCGGCGTCAAAGCCGGGGAAAGCGGTGACATC GAGGAAGCGCCCGACGTCGTCCCGGCCGGCTGA
Upstream 100 bases:
>100_bases CCGGTCACCACCTCCGACATAACTGGAACGGTACAGGCTGGGCGGTGAGCCGGGGCCGGGCGGACTTTGCCCGGACCGCG CGGCGATTAGGCTGCCCAGG
Downstream 100 bases:
>100_bases CCGGGGCGGGCGCTACAGCCGGCCGGTCGCCTTCATCGCCAGGTAGTGATCGGCGAGCGCGGGCGCCAGTTCGGCCGGTG CGGCGTCAACCACCTCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MDVDAFVLAHRPTWDRLDRLVGRRRSLSGAEIDELVELYQRVSTHLSMLRSASSDSMLVGRLSSLVARARSAVTAAHAPL SSTFVRFWTVSFPVVAYRSWRWWVATGAAFFAVVVIVALWVAGNPEVQSALGTPSDIDQLVNHDVESYYSEHPAAAFALQ IWVNNSWVSAQCIALSVVLGLPIPLVLFENAANLGVIAGLMFPAGKGGLLLGLLAPHGLLELTAVFLAGATGMRLGWSVI SPGDRPRGQVLAEQGRAVVSVAVGLVAVLLVSGLIEALVTPSPLPTFVRVGIGVVAEAAFLCYIGYFGRRGVKAGESGDI EEAPDVVPAG
Sequences:
>Translated_330_residues MDVDAFVLAHRPTWDRLDRLVGRRRSLSGAEIDELVELYQRVSTHLSMLRSASSDSMLVGRLSSLVARARSAVTAAHAPL SSTFVRFWTVSFPVVAYRSWRWWVATGAAFFAVVVIVALWVAGNPEVQSALGTPSDIDQLVNHDVESYYSEHPAAAFALQ IWVNNSWVSAQCIALSVVLGLPIPLVLFENAANLGVIAGLMFPAGKGGLLLGLLAPHGLLELTAVFLAGATGMRLGWSVI SPGDRPRGQVLAEQGRAVVSVAVGLVAVLLVSGLIEALVTPSPLPTFVRVGIGVVAEAAFLCYIGYFGRRGVKAGESGDI EEAPDVVPAG >Mature_330_residues MDVDAFVLAHRPTWDRLDRLVGRRRSLSGAEIDELVELYQRVSTHLSMLRSASSDSMLVGRLSSLVARARSAVTAAHAPL SSTFVRFWTVSFPVVAYRSWRWWVATGAAFFAVVVIVALWVAGNPEVQSALGTPSDIDQLVNHDVESYYSEHPAAAFALQ IWVNNSWVSAQCIALSVVLGLPIPLVLFENAANLGVIAGLMFPAGKGGLLLGLLAPHGLLELTAVFLAGATGMRLGWSVI SPGDRPRGQVLAEQGRAVVSVAVGLVAVLLVSGLIEALVTPSPLPTFVRVGIGVVAEAAFLCYIGYFGRRGVKAGESGDI EEAPDVVPAG
Specific function: Unknown
COG id: COG1300
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35006; Mature: 35006
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVDAFVLAHRPTWDRLDRLVGRRRSLSGAEIDELVELYQRVSTHLSMLRSASSDSMLVG CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RLSSLVARARSAVTAAHAPLSSTFVRFWTVSFPVVAYRSWRWWVATGAAFFAVVVIVALW HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VAGNPEVQSALGTPSDIDQLVNHDVESYYSEHPAAAFALQIWVNNSWVSAQCIALSVVLG HCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHEEEEEEEECCCCCHHHHHHHHHHHH LPIPLVLFENAANLGVIAGLMFPAGKGGLLLGLLAPHGLLELTAVFLAGATGMRLGWSVI CCHHEEHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEE SPGDRPRGQVLAEQGRAVVSVAVGLVAVLLVSGLIEALVTPSPLPTFVRVGIGVVAEAAF CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LCYIGYFGRRGVKAGESGDIEEAPDVVPAG HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDVDAFVLAHRPTWDRLDRLVGRRRSLSGAEIDELVELYQRVSTHLSMLRSASSDSMLVG CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RLSSLVARARSAVTAAHAPLSSTFVRFWTVSFPVVAYRSWRWWVATGAAFFAVVVIVALW HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VAGNPEVQSALGTPSDIDQLVNHDVESYYSEHPAAAFALQIWVNNSWVSAQCIALSVVLG HCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHEEEEEEEECCCCCHHHHHHHHHHHH LPIPLVLFENAANLGVIAGLMFPAGKGGLLLGLLAPHGLLELTAVFLAGATGMRLGWSVI CCHHEEHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEE SPGDRPRGQVLAEQGRAVVSVAVGLVAVLLVSGLIEALVTPSPLPTFVRVGIGVVAEAAF CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LCYIGYFGRRGVKAGESGDIEEAPDVVPAG HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA