| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yjcS [C]
Identifier: 41406387
GI number: 41406387
Start: 306471
End: 307667
Strand: Direct
Name: yjcS [C]
Synonym: MAP0289
Alternate gene names: 41406387
Gene position: 306471-307667 (Clockwise)
Preceding gene: 41406386
Following gene: 41406388
Centisome position: 6.35
GC content: 67.75
Gene sequence:
>1197_bases ATGCGCCCGGCGTCCGCGGAGCGGGCCGACCCCATCGCCCCGGGACTGTGGTGCTCGCCCGGGCTGTCCAACTCCTATTT GCTCACCACCGCGGAGGGCCGGGTGATCGTCAATACCGGCATGGGTTTCGAGGGCCCGGTGCATCGCGCCAACTTCGACG CCGTGGATTCCTCACCGGTGCGCTACATCATCTTCACGCAGGGCCACGTGGACCACGTCGGCGGCCTGGACAGTGTTCGC GACCCGGACACCGTCGTTGTGGCGCAAGCGAACTGGACGATGTGGCGCGACGACAACGAGCGGCTGATCCCGTACCGGGC CAGCCGCAGCGCCTTTGCCTTCAAAGACACCCTGGCCGGCGGCATCAAGGCCATCCAGCGGCGCCTGGGCACCACCCGGT TGCCCGGGCAGAGCGTGCCCGTCGTCGACCTCGACTTCGAGGACACACTGACCCTGGAGCTCGGCGGCCGGCGGATGGAG CTGATCTCGGTGCCCGGCGGCGAAACCACCGACTCGCTGGTGGTCTGGTTACCCGACGAACGAATATGCCTGTGCGGGAA CACCTTCGGGCCGCTGTTCGGTCATATCCCGAACCTGGTCACCATGCGCGGCGACCGGTACCGGGACGCGTTGACGGCCA TCGCCTCGGTGGAGCGGGTTCGCGGCCTGCGGGCCGAGTTGCTGGTGACGGGTCACTTCGAGCCCATCGCGGGTGCCGAC CGCATCGACGAGGAGCTCGCCCGGCTGCGCGACGCCCTCGGCTACCTCCACGATCAGACGGTGGCCGGGATGAACGCCGG CAAAGACGTCCGCACCCTGATGCGAGAAATCACGCTGCCTACGGAATACGAAGTGGGCCAGGGATACGGCAAGGTCTCCT GGGACGTGCGCGCCGTCTGGGAGAACTACTCGGGCTGGTTCCACCACGAATCCACCACCGAGCTCTACCCGGTCGGGTTC GACGCGGTGGCCCACGACGTGGTCGAACTGGCCGGCGCGGATGCGCTGCTCGATCGCGCCCGGGCGCACCTGGCCGCCGA CCGCGCGCTGCACGCGATTCACCTCGCCCAGCTGCTGCCCGCCGAACACACGGGGGCACGCGAGGTGCTGCTTCAGGCCC ATGAAAAACTTCTGGCCAGCAGCACGAACTTCTGGGAAAGTTCCTGGCTGCGCCACCAGATAGCGAGGAACTCATGA
Upstream 100 bases:
>100_bases CCCGTTTCGGCTTCTACTTCGACAAGTTCGACGTGCGCCCCGAATGAAGGAGTCAGCGATGCCCGAACCTGTCTATCGGA GCAGGCCGGGTGCCGAGGCG
Downstream 100 bases:
>100_bases CGGCATTCGCGCTGCGGCCCGAGGACTTTTATCACACGGGCATCATCGTCCCCGACCTCGAGGCGGCGATGGCCCGGCTG AGCGCGCTCGCCGGGTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Alkyl Sulfatase Or Beta-Lactamase; Alkyl Sulfatase; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Hydrolase; Metallo-Beta-Lactamase Family Protien; Metallo-Beta-Lactamase Domain Protein; Alkyl Sulfatase-Related Hydrolase; Alkyl Sulfatase Beta-Lactamase Family Protein; Secreted Protein; Beta-Lactamase-Like Protein; Hydrolase Metallo-Beta-Lactamase Superfamily
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MRPASAERADPIAPGLWCSPGLSNSYLLTTAEGRVIVNTGMGFEGPVHRANFDAVDSSPVRYIIFTQGHVDHVGGLDSVR DPDTVVVAQANWTMWRDDNERLIPYRASRSAFAFKDTLAGGIKAIQRRLGTTRLPGQSVPVVDLDFEDTLTLELGGRRME LISVPGGETTDSLVVWLPDERICLCGNTFGPLFGHIPNLVTMRGDRYRDALTAIASVERVRGLRAELLVTGHFEPIAGAD RIDEELARLRDALGYLHDQTVAGMNAGKDVRTLMREITLPTEYEVGQGYGKVSWDVRAVWENYSGWFHHESTTELYPVGF DAVAHDVVELAGADALLDRARAHLAADRALHAIHLAQLLPAEHTGAREVLLQAHEKLLASSTNFWESSWLRHQIARNS
Sequences:
>Translated_398_residues MRPASAERADPIAPGLWCSPGLSNSYLLTTAEGRVIVNTGMGFEGPVHRANFDAVDSSPVRYIIFTQGHVDHVGGLDSVR DPDTVVVAQANWTMWRDDNERLIPYRASRSAFAFKDTLAGGIKAIQRRLGTTRLPGQSVPVVDLDFEDTLTLELGGRRME LISVPGGETTDSLVVWLPDERICLCGNTFGPLFGHIPNLVTMRGDRYRDALTAIASVERVRGLRAELLVTGHFEPIAGAD RIDEELARLRDALGYLHDQTVAGMNAGKDVRTLMREITLPTEYEVGQGYGKVSWDVRAVWENYSGWFHHESTTELYPVGF DAVAHDVVELAGADALLDRARAHLAADRALHAIHLAQLLPAEHTGAREVLLQAHEKLLASSTNFWESSWLRHQIARNS >Mature_398_residues MRPASAERADPIAPGLWCSPGLSNSYLLTTAEGRVIVNTGMGFEGPVHRANFDAVDSSPVRYIIFTQGHVDHVGGLDSVR DPDTVVVAQANWTMWRDDNERLIPYRASRSAFAFKDTLAGGIKAIQRRLGTTRLPGQSVPVVDLDFEDTLTLELGGRRME LISVPGGETTDSLVVWLPDERICLCGNTFGPLFGHIPNLVTMRGDRYRDALTAIASVERVRGLRAELLVTGHFEPIAGAD RIDEELARLRDALGYLHDQTVAGMNAGKDVRTLMREITLPTEYEVGQGYGKVSWDVRAVWENYSGWFHHESTTELYPVGF DAVAHDVVELAGADALLDRARAHLAADRALHAIHLAQLLPAEHTGAREVLLQAHEKLLASSTNFWESSWLRHQIARNS
Specific function: Unknown
COG id: COG2015
COG function: function code Q; Alkyl sulfatase and related hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082368, Length=302, Percent_Identity=23.841059602649, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324409, Length=359, Percent_Identity=25.6267409470752, Blast_Score=94, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43902; Mature: 43902
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPASAERADPIAPGLWCSPGLSNSYLLTTAEGRVIVNTGMGFEGPVHRANFDAVDSSPV CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCE RYIIFTQGHVDHVGGLDSVRDPDTVVVAQANWTMWRDDNERLIPYRASRSAFAFKDTLAG EEEEEECCCCHHCCCCCCCCCCCEEEEEECCEEEEECCCCEECEEECCCCCHHHHHHHHH GIKAIQRRLGTTRLPGQSVPVVDLDFEDTLTLELGGRRMELISVPGGETTDSLVVWLPDE HHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCEEEEEECCCCCCCCCEEEEECCC RICLCGNTFGPLFGHIPNLVTMRGDRYRDALTAIASVERVRGLRAELLVTGHFEPIAGAD CEEEECCCCCHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHH RIDEELARLRDALGYLHDQTVAGMNAGKDVRTLMREITLPTEYEVGQGYGKVSWDVRAVW HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHH ENYSGWFHHESTTELYPVGFDAVAHDVVELAGADALLDRARAHLAADRALHAIHLAQLLP HCCCCEEECCCCCEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AEHTGAREVLLQAHEKLLASSTNFWESSWLRHQIARNS CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRPASAERADPIAPGLWCSPGLSNSYLLTTAEGRVIVNTGMGFEGPVHRANFDAVDSSPV CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCE RYIIFTQGHVDHVGGLDSVRDPDTVVVAQANWTMWRDDNERLIPYRASRSAFAFKDTLAG EEEEEECCCCHHCCCCCCCCCCCEEEEEECCEEEEECCCCEECEEECCCCCHHHHHHHHH GIKAIQRRLGTTRLPGQSVPVVDLDFEDTLTLELGGRRMELISVPGGETTDSLVVWLPDE HHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCEEEEEECCCCCCCCCEEEEECCC RICLCGNTFGPLFGHIPNLVTMRGDRYRDALTAIASVERVRGLRAELLVTGHFEPIAGAD CEEEECCCCCHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHH RIDEELARLRDALGYLHDQTVAGMNAGKDVRTLMREITLPTEYEVGQGYGKVSWDVRAVW HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHH ENYSGWFHHESTTELYPVGFDAVAHDVVELAGADALLDRARAHLAADRALHAIHLAQLLP HCCCCEEECCCCCEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC AEHTGAREVLLQAHEKLLASSTNFWESSWLRHQIARNS CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA