| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406354
Identifier: 41406354
GI number: 41406354
Start: 276839
End: 277783
Strand: Direct
Name: 41406354
Synonym: MAP0256
Alternate gene names: NA
Gene position: 276839-277783 (Clockwise)
Preceding gene: 41406351
Following gene: 41406355
Centisome position: 5.73
GC content: 69.95
Gene sequence:
>945_bases ATGCCGCGGACCGACAACGATTCCTGGGACATCACCCAAAGCGTGGGTGCCACCGCACTGGGTGTGGCCGCCGCCCGCGC GGCGGAGACCGAAAGCGAAAACCCGCTCATCAGCGACCCGTTCGCGCGCATTTTCGTCGAGGCCGCCGGCAAGGGGATGT GGAGCATCTATGCCGACCCGGCGCTGCTGACCAAGGCGGACGACCTCGAGCCGGACCTGCGCGGCCGGCTGCAGCTGATG ATCGACTTCATGGCCACCCGGACCGCGTTCTTCGACGAGTTCTTCCTCGCCGCGGCCGACGCCGGAGTGCGGCAGGTGGT GATCCTGGCCGCCGGCCTGGACGCGCGCAGCTGGCGGCTGCCGTGGCCGGACGGCACCGTCGTCTACGAGCTCGACCAGC CCAAGGTGCTGGATTTCAAGTCGACCACGTTGCGCGAGCACGGCGCCCAGCCCAAGGCGGAACTGGTCAACGTGCCCATC GATCTGCGTCAGGACTGGCCAAAAGCGTTGCAGGAGGCTGGATTTGACGCCTCGCGGCCGGCGGTGTGGTCGGCCGAAGG GCTGGTTCGTTACCTGCCGGCCCAGGCCCAGGACCTGCTGTTCGAGCGGATCGATGCGCTGAGCGCGCCGGGCAGTCGGC TGGCGTCCAACGTGCCCGACTCGGGATTCACCGATCCCGACCGGCTGGCCCGCCAGCGCGAGGACATGCGGCGGATGCGC GCCGCGGCGGCCAAACTGGTCGACGCCGAGATCACCGACTTCGACGACCTGTGGTATCCCGAGGAGCGCACGCCGGTCGA CAGCTGGCTGCGCGAGCGCGGGTGGGACGTCTCGACGGCGACGTTCGCGGAGTTGATGGCCCGCTACGGCCGCAGCATTC CGCAGGGGGCGCAGGATTCGATGCCGCCCACCCTCTACGTGTCCGCGCGGCGGCGGGCGGGCTGA
Upstream 100 bases:
>100_bases TGGGCGTCATCGCACTCCCTTGCAACCTGTCGACCGTCCGGGAAGAAGCCGTCGACCGTCTGGGAAGAAGACTAGGACAG CGGCTGGAACAATGGCCGGT
Downstream 100 bases:
>100_bases GTCGAACGCCGACATCGTAAGCGGCGCCGTTAATTTCACGGACCCGGGGCGGGCCGCCCGAATTCAGCGGCGGTCCCGGG CATAACCAAATGCATGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPRTDNDSWDITQSVGATALGVAAARAAETESENPLISDPFARIFVEAAGKGMWSIYADPALLTKADDLEPDLRGRLQLM IDFMATRTAFFDEFFLAAADAGVRQVVILAAGLDARSWRLPWPDGTVVYELDQPKVLDFKSTTLREHGAQPKAELVNVPI DLRQDWPKALQEAGFDASRPAVWSAEGLVRYLPAQAQDLLFERIDALSAPGSRLASNVPDSGFTDPDRLARQREDMRRMR AAAAKLVDAEITDFDDLWYPEERTPVDSWLRERGWDVSTATFAELMARYGRSIPQGAQDSMPPTLYVSARRRAG
Sequences:
>Translated_314_residues MPRTDNDSWDITQSVGATALGVAAARAAETESENPLISDPFARIFVEAAGKGMWSIYADPALLTKADDLEPDLRGRLQLM IDFMATRTAFFDEFFLAAADAGVRQVVILAAGLDARSWRLPWPDGTVVYELDQPKVLDFKSTTLREHGAQPKAELVNVPI DLRQDWPKALQEAGFDASRPAVWSAEGLVRYLPAQAQDLLFERIDALSAPGSRLASNVPDSGFTDPDRLARQREDMRRMR AAAAKLVDAEITDFDDLWYPEERTPVDSWLRERGWDVSTATFAELMARYGRSIPQGAQDSMPPTLYVSARRRAG >Mature_313_residues PRTDNDSWDITQSVGATALGVAAARAAETESENPLISDPFARIFVEAAGKGMWSIYADPALLTKADDLEPDLRGRLQLMI DFMATRTAFFDEFFLAAADAGVRQVVILAAGLDARSWRLPWPDGTVVYELDQPKVLDFKSTTLREHGAQPKAELVNVPID LRQDWPKALQEAGFDASRPAVWSAEGLVRYLPAQAQDLLFERIDALSAPGSRLASNVPDSGFTDPDRLARQREDMRRMRA AAAKLVDAEITDFDDLWYPEERTPVDSWLRERGWDVSTATFAELMARYGRSIPQGAQDSMPPTLYVSARRRAG
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y256_MYCPA (Q745R0)
Other databases:
- EMBL: AE016958 - RefSeq: NP_959190.1 - ProteinModelPortal: Q745R0 - SMR: Q745R0 - EnsemblBacteria: EBMYCT00000039446 - GeneID: 2719620 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP0256 - NMPDR: fig|262316.1.peg.256 - GeneTree: EBGT00050000015698 - HOGENOM: HBG570783 - OMA: DFMATRT - ProtClustDB: CLSK792708 - InterPro: IPR011610 - InterPro: IPR007213 - TIGRFAMs: TIGR00027
Pfam domain/function: PF04072 LCM
EC number: NA
Molecular weight: Translated: 34860; Mature: 34729
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: BINDING 132-132
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTDNDSWDITQSVGATALGVAAARAAETESENPLISDPFARIFVEAAGKGMWSIYADP CCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCC ALLTKADDLEPDLRGRLQLMIDFMATRTAFFDEFFLAAADAGVRQVVILAAGLDARSWRL HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC PWPDGTVVYELDQPKVLDFKSTTLREHGAQPKAELVNVPIDLRQDWPKALQEAGFDASRP CCCCCCEEEECCCCCEECCHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHCCCCCCCC AVWSAEGLVRYLPAQAQDLLFERIDALSAPGSRLASNVPDSGFTDPDRLARQREDMRRMR CEECHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH AAAAKLVDAEITDFDDLWYPEERTPVDSWLRERGWDVSTATFAELMARYGRSIPQGAQDS HHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC MPPTLYVSARRRAG CCCEEEEECCCCCC >Mature Secondary Structure PRTDNDSWDITQSVGATALGVAAARAAETESENPLISDPFARIFVEAAGKGMWSIYADP CCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCC ALLTKADDLEPDLRGRLQLMIDFMATRTAFFDEFFLAAADAGVRQVVILAAGLDARSWRL HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC PWPDGTVVYELDQPKVLDFKSTTLREHGAQPKAELVNVPIDLRQDWPKALQEAGFDASRP CCCCCCEEEECCCCCEECCHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHCCCCCCCC AVWSAEGLVRYLPAQAQDLLFERIDALSAPGSRLASNVPDSGFTDPDRLARQREDMRRMR CEECHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH AAAAKLVDAEITDFDDLWYPEERTPVDSWLRERGWDVSTATFAELMARYGRSIPQGAQDS HHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC MPPTLYVSARRRAG CCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA