| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406274
Identifier: 41406274
GI number: 41406274
Start: 183680
End: 184120
Strand: Direct
Name: 41406274
Synonym: MAP0176
Alternate gene names: NA
Gene position: 183680-184120 (Clockwise)
Preceding gene: 41406272
Following gene: 41406275
Centisome position: 3.8
GC content: 67.12
Gene sequence:
>441_bases ATGACGTTCGGTTGTGGCTCCCTGGGACTCGACACCAAGATCACCCTGCTGGCCGCGGGGCTGATCTTTTTGCTCGCGCT GATCCTGGGCGTGTGGAAGTACCGCGAGATGATGACCTCGCAGAACCACCTTGCGCATCCCTACGTCGACATCGCGCACC GGGCGGCGCTGCTGTACTCGTTCGCCACGCTGCTGATCGCGGTGTTCGTGCAACTGAGCGCCTGGCCGGTGTGGGTGAAC CTGGCCGCGGCCGGGGTGCTGGTCTTCTTCTTCCTGGCGGCCATCCTGGCCTACATCGGCCACGGCGCGCGGCGCGACAC CGTCAACCAGTTCGAGCGCCCCACCGCCGGACTGCGGTGGTCGATGGCCGCGCTGATCGTCGGGGAGATCGGCGGGTTCG GCGTGCTGTTCGCCGGGTTCGTCGCCGGACAGCTGTGGTGA
Upstream 100 bases:
>100_bases TCTGGGCCCAGGTGGTGTTCTGCGGGGAGGTCTTGAAGGCGAATCGCATGACGCCGACGTTAGTCGGTCTTTATGAAGGA CAACTAAACTCGACGTTCTG
Downstream 100 bases:
>100_bases TCCGCGCGGGGGTTCGGCGGTGATCTCCGGCGCCCGGCCTCTCCGCGCTGGCGGTCACCGCGCGGGCACACTGGAGTCAT GGACCCGGTAGTTGCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTFGCGSLGLDTKITLLAAGLIFLLALILGVWKYREMMTSQNHLAHPYVDIAHRAALLYSFATLLIAVFVQLSAWPVWVN LAAAGVLVFFFLAAILAYIGHGARRDTVNQFERPTAGLRWSMAALIVGEIGGFGVLFAGFVAGQLW
Sequences:
>Translated_146_residues MTFGCGSLGLDTKITLLAAGLIFLLALILGVWKYREMMTSQNHLAHPYVDIAHRAALLYSFATLLIAVFVQLSAWPVWVN LAAAGVLVFFFLAAILAYIGHGARRDTVNQFERPTAGLRWSMAALIVGEIGGFGVLFAGFVAGQLW >Mature_145_residues TFGCGSLGLDTKITLLAAGLIFLLALILGVWKYREMMTSQNHLAHPYVDIAHRAALLYSFATLLIAVFVQLSAWPVWVNL AAAGVLVFFFLAAILAYIGHGARRDTVNQFERPTAGLRWSMAALIVGEIGGFGVLFAGFVAGQLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15843; Mature: 15712
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFGCGSLGLDTKITLLAAGLIFLLALILGVWKYREMMTSQNHLAHPYVDIAHRAALLYS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH FATLLIAVFVQLSAWPVWVNLAAAGVLVFFFLAAILAYIGHGARRDTVNQFERPTAGLRW HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHH SMAALIVGEIGGFGVLFAGFVAGQLW HHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure TFGCGSLGLDTKITLLAAGLIFLLALILGVWKYREMMTSQNHLAHPYVDIAHRAALLYS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH FATLLIAVFVQLSAWPVWVNLAAAGVLVFFFLAAILAYIGHGARRDTVNQFERPTAGLRW HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHH SMAALIVGEIGGFGVLFAGFVAGQLW HHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA