| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ppe69 [H]
Identifier: 41406256
GI number: 41406256
Start: 160204
End: 161394
Strand: Direct
Name: ppe69 [H]
Synonym: MAP0158
Alternate gene names: 41406256
Gene position: 160204-161394 (Clockwise)
Preceding gene: 41406255
Following gene: 41406258
Centisome position: 3.32
GC content: 72.96
Gene sequence:
>1191_bases ATGGCCGATCCCGGATGGGCTGCGCGTACGCCCGAGGACAACGACATGCTGCTCAAGGCAGGCGTCGGGGTGGGCACTCA CGTGGCCAACCAGACCGCCTGGACGACCTTGGCCGCCACCCATCATGCCTCGGGCGTCGCATCGGCGATCAACACCGCCG CGACCTCGGCGAGCTGGCTGGGCGCCGGGTCGGCGGCCTCGGCGGCCAACGTCACCATGCTCAACGCGTCGCTGCACGGC CTGGCCGGCTGGGTCGACGTCAAGCCGGCGGTGGTGGCCACCGCCATCTCGGCCTACCAGATGGCCTACGGCTCGATGCG CCCGGCGCCCGAATGCATCGCCAACCGGACCGAGACCGCGACCGACTACGGCATCAACCCGCTGGTCCTCGGCGCGCTGA CGCCGCGGATCGCGTCGCTGGAACTCGAGTACTACGGCTCCATGTGGCCCAACAACTCGGCCGTCGGCGCCAGCTACGGG GCGGTGCTGACCGCGCTGGCCGAAAGCCTGGCGATCGCGCCGCCGATCGCGTCCATGGGCGCCTCACCGGCCGCGCCGGC CGAGGCGGTCTCGGCGATCGGCGAGTCCGCGGCCAACGTCGCCGCCGGCGACGGCATGCGCGCCGCCTACCAGGGCGTGC AGACCGGCACCCAGGGCGCGGGGCAGGCCGCCTCGAGCGGGCAGGACCTGGGCGGCCAGATGAGCAGCCTGATGCAACCG GTGCAGGAGCTGATGGGAGCGGTGCCGCAGGCGATGCAGGCCCCCATGCAGATGATGCAGGCTCCGATGCAGATGATGCA GCCGCTGCAGTCGATGATGGGCATGTTCGCCAACCCCGGCGCCATGGGCATGGGTGGGGCGGCGCCGGGAGTCTCGGCCG TCTCCGCCACCACCGGGCTCTCCGCCGCGGAAGCCGGTGCCGGTGGCGCCGGATCCCTGGGCAGCGCGGGCGTGCCCGCA ACCAGTTTCACCCGTCCGGTCAGCGCCTTCGAGCCCGCCACCAGTGGCCGGCCGGTGGGGCTGCGGCCGGCCGGGGCGTT AGGCGCCGAGGCTCTGCGACCGCAGACCACGACGATGAGTGGAGCCCCGATGGGCGGTATGCCCGTCGGGCACGGGGCGG GAGGCCAACGCGGATCCCGTGACAAGGCCGAAGAGCCCGCGACCGTGCGGGTCGTCGACGACCGAGTGTGA
Upstream 100 bases:
>100_bases GGGGATGGCGTCCGGGGTGTACACCACCACCGAGGCGATGCGCTCGCTGGCCATGGGAATCAGCAGCGTCCTCTAAACCT GGTCAAAGGGGGAAGTACGC
Downstream 100 bases:
>100_bases GCAGACCCCCTGGTGAAGGGTGAATCGACAGGTACACACAGCCGCCATACACTTCGCTTCATGCCCTTACGGGGGGCGGC CAACCCAGAAGGAGATTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MADPGWAARTPEDNDMLLKAGVGVGTHVANQTAWTTLAATHHASGVASAINTAATSASWLGAGSAASAANVTMLNASLHG LAGWVDVKPAVVATAISAYQMAYGSMRPAPECIANRTETATDYGINPLVLGALTPRIASLELEYYGSMWPNNSAVGASYG AVLTALAESLAIAPPIASMGASPAAPAEAVSAIGESAANVAAGDGMRAAYQGVQTGTQGAGQAASSGQDLGGQMSSLMQP VQELMGAVPQAMQAPMQMMQAPMQMMQPLQSMMGMFANPGAMGMGGAAPGVSAVSATTGLSAAEAGAGGAGSLGSAGVPA TSFTRPVSAFEPATSGRPVGLRPAGALGAEALRPQTTTMSGAPMGGMPVGHGAGGQRGSRDKAEEPATVRVVDDRV
Sequences:
>Translated_396_residues MADPGWAARTPEDNDMLLKAGVGVGTHVANQTAWTTLAATHHASGVASAINTAATSASWLGAGSAASAANVTMLNASLHG LAGWVDVKPAVVATAISAYQMAYGSMRPAPECIANRTETATDYGINPLVLGALTPRIASLELEYYGSMWPNNSAVGASYG AVLTALAESLAIAPPIASMGASPAAPAEAVSAIGESAANVAAGDGMRAAYQGVQTGTQGAGQAASSGQDLGGQMSSLMQP VQELMGAVPQAMQAPMQMMQAPMQMMQPLQSMMGMFANPGAMGMGGAAPGVSAVSATTGLSAAEAGAGGAGSLGSAGVPA TSFTRPVSAFEPATSGRPVGLRPAGALGAEALRPQTTTMSGAPMGGMPVGHGAGGQRGSRDKAEEPATVRVVDDRV >Mature_395_residues ADPGWAARTPEDNDMLLKAGVGVGTHVANQTAWTTLAATHHASGVASAINTAATSASWLGAGSAASAANVTMLNASLHGL AGWVDVKPAVVATAISAYQMAYGSMRPAPECIANRTETATDYGINPLVLGALTPRIASLELEYYGSMWPNNSAVGASYGA VLTALAESLAIAPPIASMGASPAAPAEAVSAIGESAANVAAGDGMRAAYQGVQTGTQGAGQAASSGQDLGGQMSSLMQPV QELMGAVPQAMQAPMQMMQAPMQMMQPLQSMMGMFANPGAMGMGGAAPGVSAVSATTGLSAAEAGAGGAGSLGSAGVPAT SFTRPVSAFEPATSGRPVGLRPAGALGAEALRPQTTTMSGAPMGGMPVGHGAGGQRGSRDKAEEPATVRVVDDRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000030 [H]
Pfam domain/function: PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 39040; Mature: 38908
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPGWAARTPEDNDMLLKAGVGVGTHVANQTAWTTLAATHHASGVASAINTAATSASWL CCCCCCCCCCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHC GAGSAASAANVTMLNASLHGLAGWVDVKPAVVATAISAYQMAYGSMRPAPECIANRTETA CCCCCCCCCEEEEEECHHHHHHCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC TDYGINPLVLGALTPRIASLELEYYGSMWPNNSAVGASYGAVLTALAESLAIAPPIASMG HHCCCCCEEHHHHCCCHHEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCC ASPAAPAEAVSAIGESAANVAAGDGMRAAYQGVQTGTQGAGQAASSGQDLGGQMSSLMQP CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH VQELMGAVPQAMQAPMQMMQAPMQMMQPLQSMMGMFANPGAMGMGGAAPGVSAVSATTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCC SAAEAGAGGAGSLGSAGVPATSFTRPVSAFEPATSGRPVGLRPAGALGAEALRPQTTTMS CHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC GAPMGGMPVGHGAGGQRGSRDKAEEPATVRVVDDRV CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC >Mature Secondary Structure ADPGWAARTPEDNDMLLKAGVGVGTHVANQTAWTTLAATHHASGVASAINTAATSASWL CCCCCCCCCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHC GAGSAASAANVTMLNASLHGLAGWVDVKPAVVATAISAYQMAYGSMRPAPECIANRTETA CCCCCCCCCEEEEEECHHHHHHCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC TDYGINPLVLGALTPRIASLELEYYGSMWPNNSAVGASYGAVLTALAESLAIAPPIASMG HHCCCCCEEHHHHCCCHHEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCC ASPAAPAEAVSAIGESAANVAAGDGMRAAYQGVQTGTQGAGQAASSGQDLGGQMSSLMQP CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH VQELMGAVPQAMQAPMQMMQAPMQMMQPLQSMMGMFANPGAMGMGGAAPGVSAVSATTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCC SAAEAGAGGAGSLGSAGVPATSFTRPVSAFEPATSGRPVGLRPAGALGAEALRPQTTTMS CHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC GAPMGGMPVGHGAGGQRGSRDKAEEPATVRVVDDRV CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]