Click here to switch to the map view.

The map label for this gene is yrbE [C]

Identifier: 41406190

GI number: 41406190

Start: 99947

End: 100816

Strand: Direct

Name: yrbE [C]

Synonym: MAP0092

Alternate gene names: 41406190

Gene position: 99947-100816 (Clockwise)

Preceding gene: 41406187

Following gene: 41406191

Centisome position: 2.07

GC content: 66.21

Gene sequence:

>870_bases
ATGACCGCCCAGGACGAGCGCGCGCTCGACGAGGACCGAGCACCCGACAGCGTGGCCACCATCCAGGAGTGGTCGGCCGG
ATATGTCGTGCGGCACCCGCTTGCCTCACTCAATACCCTTGGCGAGCAATACATTCTCGCGGTACGCACAGTCGAGTACT
GCGTGGTCGATCTGTTCACCGGGCGCTTCCAATGGGCGGAATTCGTGCGCCAGGGCGCATTCATGGCGGCCACGGCGGTA
TTGCCCACCGTGCTGGTGGCGCTGCCGATCGGCGTGACGCTGTCCATCCAGTTCGCCCTGCTGGCCAACCAGGTCGGTGC
GACGTCGCTCGCCGGCGCAGCCAGTGGGCTCGCCGTGATCCGCCAGGCCGCCTCGCTGGTGGCCGCGGTGCTGACGGCGT
CGGCCGTCGGCTCCGCGATCACCGCCGACCTCGGCTCGCGAACCATGCGCGAAGAGACCGACGCGATGGAGGTGATGGGC
GTCTCGGTGATCCGCCGACTGGTGGTGCCGCGCTTCGCCGCGGCGATCATGGTCGGTGTCGCCCTGACCGGAATCACCTG
CTTCGTCGGCTTTTTGGCCAGCTATCTGTTCAACGTGTATTTCCAGCGCGGCGCGCCGGGCAGTTTCGTGGCGACCTTCT
CGTCCTTCGCCACCACCGAGGACATGATCGTCGCGCTGCTCAAGGCCGTGATCTACGGCGCGATCGTCGCGGTAATCGCC
TGCCAGAAAGGCCTTTTCACCAAGGGCGGACCGGCGGGCGTGGCCAACTCGGTGAACGCGGCCGTGGTGGAGTCGATCCT
GGTGCTGATGATCGTCAACGTCGGCATCAGCGAGTTGTACAACACGCTGTTCCCCAGGACCGGGTTGTGA

Upstream 100 bases:

>100_bases
AAGCTGAGTAGCCGTTAACATATCCGCCCGTGGGGGCACAGCGAACGCTCAGTGACGAACACCGGCAGCCGCGAGTGGCT
GCCCCGGGGCGCATCCGGCG

Downstream 100 bases:

>100_bases
CATGACGGCCTCGACCTACATCCCCGGACTGGCGCGACCGTTCGTCGGTGCCTATCGGGTCGCCGCCGCGCCTACCATGC
GGCTGGGACACATGCTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTAQDERALDEDRAPDSVATIQEWSAGYVVRHPLASLNTLGEQYILAVRTVEYCVVDLFTGRFQWAEFVRQGAFMAATAV
LPTVLVALPIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLTASAVGSAITADLGSRTMREETDAMEVMG
VSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGSFVATFSSFATTEDMIVALLKAVIYGAIVAVIA
CQKGLFTKGGPAGVANSVNAAVVESILVLMIVNVGISELYNTLFPRTGL

Sequences:

>Translated_289_residues
MTAQDERALDEDRAPDSVATIQEWSAGYVVRHPLASLNTLGEQYILAVRTVEYCVVDLFTGRFQWAEFVRQGAFMAATAV
LPTVLVALPIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLTASAVGSAITADLGSRTMREETDAMEVMG
VSVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGSFVATFSSFATTEDMIVALLKAVIYGAIVAVIA
CQKGLFTKGGPAGVANSVNAAVVESILVLMIVNVGISELYNTLFPRTGL
>Mature_288_residues
TAQDERALDEDRAPDSVATIQEWSAGYVVRHPLASLNTLGEQYILAVRTVEYCVVDLFTGRFQWAEFVRQGAFMAATAVL
PTVLVALPIGVTLSIQFALLANQVGATSLAGAASGLAVIRQAASLVAAVLTASAVGSAITADLGSRTMREETDAMEVMGV
SVIRRLVVPRFAAAIMVGVALTGITCFVGFLASYLFNVYFQRGAPGSFVATFSSFATTEDMIVALLKAVIYGAIVAVIAC
QKGLFTKGGPAGVANSVNAAVVESILVLMIVNVGISELYNTLFPRTGL

Specific function: Could be part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=245, Percent_Identity=28.1632653061224, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 30267; Mature: 30135

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TAQDERALDEDRAPDSVATIQEWSAGYVVRHPLASLNTLGEQYILAVRTVEYCVVDLFT
CCCHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRFQWAEFVRQGAFMAATAVLPTVLVALPIGVTLSIQFALLANQVGATSLAGAASGLAVI
CHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
RQAASLVAAVLTASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIMVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTGITCFVGFLASYLFNVYFQRGAPGSFVATFSSFATTEDMIVALLKAVIYGAIVAVIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CQKGLFTKGGPAGVANSVNAAVVESILVLMIVNVGISELYNTLFPRTGL
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]