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The map label for this gene is mmpS1 [H]

Identifier: 41406173

GI number: 41406173

Start: 83657

End: 84079

Strand: Direct

Name: mmpS1 [H]

Synonym: MAP0075

Alternate gene names: 41406173

Gene position: 83657-84079 (Clockwise)

Preceding gene: 41406172

Following gene: 41406174

Centisome position: 1.73

GC content: 66.19

Gene sequence:

>423_bases
GTGACGTTTCTCAAGCGGGGATGGGTTCTGTTGGTGGTGGTCGTGGCGTTGATCGTCGGCGGGGTTGCGGTGGTCCGACT
CAACGGCGTGTTCCCCGGGCCCGGTCTGCCCAAGCCCGATCCGCGGGATGCGACCCCGCCGTATGCCTCCAAGACGGCCA
TCTACGAAATCCTGGGACCGCCCGGGACGACGGGCGTCGTCAACTGGATGGACGCGGAGTCACTGCCGCAGCGGGCCAGT
TTCACCACGTTGCCGTGGTCGAAGACGATCGTGGCGGAGATGCCCGGCATCTTCGCCTATGTCGTGGCCCAGGGCGATGG
CCCGTTCATCGGCTGCCGGATCACCGTTGACGGCAGGCCGGTCGATCAGCAGGAGTCCCACAACCGGGACGCGCAGGTTT
CCTGCTTGGACAAGTCCGCGTGA

Upstream 100 bases:

>100_bases
GGAATTAACGCGGCAGTAATCGCGTTGCGCTTGCGGTGGCGCACACGATTACATGCCTTGATGTCGGCCTGTCGAGCTTT
GGTAATCGGGAGGGGCGGTC

Downstream 100 bases:

>100_bases
GCGACGACATGAGCGACACGGACGAAATCCCCGTCGCGCACCGCACCCGCGTCGAACACAAACCCCGTCTGGCACGCACG
ATTCGGGTGCTGGCGCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTFLKRGWVLLVVVVALIVGGVAVVRLNGVFPGPGLPKPDPRDATPPYASKTAIYEILGPPGTTGVVNWMDAESLPQRAS
FTTLPWSKTIVAEMPGIFAYVVAQGDGPFIGCRITVDGRPVDQQESHNRDAQVSCLDKSA

Sequences:

>Translated_140_residues
MTFLKRGWVLLVVVVALIVGGVAVVRLNGVFPGPGLPKPDPRDATPPYASKTAIYEILGPPGTTGVVNWMDAESLPQRAS
FTTLPWSKTIVAEMPGIFAYVVAQGDGPFIGCRITVDGRPVDQQESHNRDAQVSCLDKSA
>Mature_139_residues
TFLKRGWVLLVVVVALIVGGVAVVRLNGVFPGPGLPKPDPRDATPPYASKTAIYEILGPPGTTGVVNWMDAESLPQRASF
TTLPWSKTIVAEMPGIFAYVVAQGDGPFIGCRITVDGRPVDQQESHNRDAQVSCLDKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 14932; Mature: 14801

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFLKRGWVLLVVVVALIVGGVAVVRLNGVFPGPGLPKPDPRDATPPYASKTAIYEILGP
CCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
PGTTGVVNWMDAESLPQRASFTTLPWSKTIVAEMPGIFAYVVAQGDGPFIGCRITVDGRP
CCCCCEEEECCCCCCCCCCCEEECCCCCHHHHHCCCEEEEEEECCCCCEEEEEEEECCCC
VDQQESHNRDAQVSCLDKSA
CCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
TFLKRGWVLLVVVVALIVGGVAVVRLNGVFPGPGLPKPDPRDATPPYASKTAIYEILGP
CCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
PGTTGVVNWMDAESLPQRASFTTLPWSKTIVAEMPGIFAYVVAQGDGPFIGCRITVDGRP
CCCCCEEEECCCCCCCCCCCEEECCCCCHHHHHCCCEEEEEEECCCCCEEEEEEEECCCC
VDQQESHNRDAQVSCLDKSA
CCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]