| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41406138
Identifier: 41406138
GI number: 41406138
Start: 45347
End: 45658
Strand: Direct
Name: 41406138
Synonym: MAP0040
Alternate gene names: NA
Gene position: 45347-45658 (Clockwise)
Preceding gene: 41406137
Following gene: 41406139
Centisome position: 0.94
GC content: 65.38
Gene sequence:
>312_bases ATGACGGACGCGAATCCCGCTTTCGACACTGTTCACCCGAGCGGACACATCCTGGTCCGCTCGTGCGGCGGCGGCTACAT GCACAGCGTCGCGCTGAGCGAAGAGGCGATGGAAACCGACGCCGAGACGCTGGCACAAGGCATTCTGCTGACCGCCGACG TGTCCTGTCTCAAGGCGTTGCTGGAAATCCGCGACGAGATCGTCGCCGCCGGGCACACACCGTCGGCGGAAGTTCCGACC CCGCGCGACCTCGATGCGGCCATCGAAAAGTTGCTGGCGCACAAGTTGCGCCGCCGCACGCACGCCAAGTAG
Upstream 100 bases:
>100_bases ACGCCGACCTGGCCGACCAACTGACGGTTTCGGCGGCGATGTGGGAGCAGCACGAGCAGGAGGCGGCAGACAAGTTCGGC AGCATCGTCGACCGCGGTCG
Downstream 100 bases:
>100_bases ACGGCTCGGACCGGTCTCAGCCGAGGTGTTCGGTTAGCGCAGCCACGGCTTGGCCGCGCTGGGATCGGGAGCGATACCGG TCGGCGGCTCTACCGGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTDANPAFDTVHPSGHILVRSCGGGYMHSVALSEEAMETDAETLAQGILLTADVSCLKALLEIRDEIVAAGHTPSAEVPT PRDLDAAIEKLLAHKLRRRTHAK
Sequences:
>Translated_103_residues MTDANPAFDTVHPSGHILVRSCGGGYMHSVALSEEAMETDAETLAQGILLTADVSCLKALLEIRDEIVAAGHTPSAEVPT PRDLDAAIEKLLAHKLRRRTHAK >Mature_102_residues TDANPAFDTVHPSGHILVRSCGGGYMHSVALSEEAMETDAETLAQGILLTADVSCLKALLEIRDEIVAAGHTPSAEVPTP RDLDAAIEKLLAHKLRRRTHAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11026; Mature: 10894
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDANPAFDTVHPSGHILVRSCGGGYMHSVALSEEAMETDAETLAQGILLTADVSCLKAL CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHH LEIRDEIVAAGHTPSAEVPTPRDLDAAIEKLLAHKLRRRTHAK HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDANPAFDTVHPSGHILVRSCGGGYMHSVALSEEAMETDAETLAQGILLTADVSCLKAL CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHH LEIRDEIVAAGHTPSAEVPTPRDLDAAIEKLLAHKLRRRTHAK HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]