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The map label for this gene is bphB [H]

Identifier: 39998526

GI number: 39998526

Start: 3781828

End: 3783429

Strand: Reverse

Name: bphB [H]

Synonym: GSU3437

Alternate gene names: 39998526

Gene position: 3783429-3781828 (Counterclockwise)

Preceding gene: 39998527

Following gene: 39998525

Centisome position: 99.19

GC content: 64.86

Gene sequence:

>1602_bases
ATGGAGAGCGAACACATCTGCAAATTGCTGCTCGATTTCGCAGCTGACTGGGAGTTCTGGCTCGACCCCGAGGGGGCCTG
TCGCTATGTCTCCCCGGCCTGCGAGCGGATTACCGGGTACCGTCCCGACGAGTTCATGGGTGAAGCGGGCCTGCTGCGGC
GGATTGTCCATCCTGAGGACCGGGAGGCCGTGGAGAGCCATCTGACGGATGCTCTGGCCAATCGAGAGGGGGTCTGCCCC
ATTGACTTCCGCATCATCACGCGCACCGGTGAGGTGCGTTGGATCAGTCATCACTGTCAGCCGGTGCACGACGGCGCCGG
AACGTTTCTCGGCCGGCGGGGGAGCAATCGGGACATTACCGACCGCATGGCGGCCCAGGAGGAGAACCGGCGGCTCGGCG
GGCTCATGGAGCGGCTTGTCCGCGTAGTGCAGGAGCTTTCCCGGGCCCGCAGCCTCGACGAGATTACGGCGGTGGTCCGG
ACTGCCGCCCGGGAGTTGGTGAGCGCCGACGGGGCCACGTTTGTCCTGCGGGAAAACGGTAACTGCTTCTATGCGGACGA
AGATGCCATCGCCCCGCTCTGGAAGGGGCTCCGGTTCCCCCTTGAGCGCTGCATCAGCGGGTGGGTCATGCTCAACCGGC
AGGCGGCGGTCATCGAGGATATCTACCAGGATCAGCGGATACCCGTGGAGGCCTATCGCCCTACGTTCGTGCAGAGCCTT
GCCATGGTCCCCATCCGGGGGGAAGACCCCATCGGCGCCATCGGCACCTACTGGGCCAGGCGCCATCGCCCCTCCGAGCA
GGAGATCAGCGTCATTCAGGCCCTTGCCGACACGACGTCGGTGGCCATGGAAAATGTGCGGGTCTACGCGGATTTGGAGC
AGCGCGTGCGGGAGCGCACCGAGGCCCTGGAAACCGCCAACCGCGAACTTGAGGCGTTCGGTTTTTCAGTTTCTCACGAC
CTGCGCGGCCCGCTCCGGAGGCTGGACGGGTACAGCCGCATGCTCTATGAGGACTACGCCGACCGCCTGGAGGGGGAGGG
GCGGGACATCCTCATCCGTATGATCCGGCTGGCAACGCGGATGGAACAGCTGATAGACGATCTTCTCAGGTTTTCCCGGA
GCGTGAAGGGTGAGGTCGTCCACGAGGCGGTGAACCTGAGCCGCCTGGCGCGGAGCATTGCCCGTGAGCTGAGTGACGGG
GAGCCCGGTCGGGCAGTGGATTTCATCATAGCCGACGGCCTGACGGTCGAGGGGGATCCGGGGTTGCTGCGGGCTGCCAT
GGAGAATATCCTTAGGAACGCCTGGAAATATACGGCCCCAAAGGAGAACGCAGTCATCGAGTTCGGCCGTTGCGAGGGCG
AGGGAGAGCGGCTCTACTTTATCCGCGACAACGGCGTCGGCTTTGACATGGCCCACAAGGACAAGCTTTTTCAGCCCTTC
GAGCGCCTCCACGACGCGCGCGCGTTCGAGGGGACCGGCATCGGCCTTGCCACGGTCAAGCGGATCATCGACCGCCATGG
AGGGCGCATCTGGGCGGAGGGAACGCCCGGCGCCGGCGCCACGTTTTACTTCACGTTGCCGGAACCCGGCGGGGAGTCAT
GA

Upstream 100 bases:

>100_bases
TGTTCCGCCGTCATAACCGCGTGGAAGAAACAGCCCGGCGCGGCGGTGCATACATTCGGGGGCCATCTCCCGGCATTGCG
TCACACCATTGAGGAAGCCG

Downstream 100 bases:

>100_bases
ACGGAGTTGCTCTCGACATAGCCATCCACGGGGCCAAGATCGCCCTGATCTTCTTCGTGGTGCTCACCCTGGCGGCCTAC
CTGGTCTTCGCCGAGCGGCG

Product: sensory box histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MESEHICKLLLDFAADWEFWLDPEGACRYVSPACERITGYRPDEFMGEAGLLRRIVHPEDREAVESHLTDALANREGVCP
IDFRIITRTGEVRWISHHCQPVHDGAGTFLGRRGSNRDITDRMAAQEENRRLGGLMERLVRVVQELSRARSLDEITAVVR
TAARELVSADGATFVLRENGNCFYADEDAIAPLWKGLRFPLERCISGWVMLNRQAAVIEDIYQDQRIPVEAYRPTFVQSL
AMVPIRGEDPIGAIGTYWARRHRPSEQEISVIQALADTTSVAMENVRVYADLEQRVRERTEALETANRELEAFGFSVSHD
LRGPLRRLDGYSRMLYEDYADRLEGEGRDILIRMIRLATRMEQLIDDLLRFSRSVKGEVVHEAVNLSRLARSIARELSDG
EPGRAVDFIIADGLTVEGDPGLLRAAMENILRNAWKYTAPKENAVIEFGRCEGEGERLYFIRDNGVGFDMAHKDKLFQPF
ERLHDARAFEGTGIGLATVKRIIDRHGGRIWAEGTPGAGATFYFTLPEPGGES

Sequences:

>Translated_533_residues
MESEHICKLLLDFAADWEFWLDPEGACRYVSPACERITGYRPDEFMGEAGLLRRIVHPEDREAVESHLTDALANREGVCP
IDFRIITRTGEVRWISHHCQPVHDGAGTFLGRRGSNRDITDRMAAQEENRRLGGLMERLVRVVQELSRARSLDEITAVVR
TAARELVSADGATFVLRENGNCFYADEDAIAPLWKGLRFPLERCISGWVMLNRQAAVIEDIYQDQRIPVEAYRPTFVQSL
AMVPIRGEDPIGAIGTYWARRHRPSEQEISVIQALADTTSVAMENVRVYADLEQRVRERTEALETANRELEAFGFSVSHD
LRGPLRRLDGYSRMLYEDYADRLEGEGRDILIRMIRLATRMEQLIDDLLRFSRSVKGEVVHEAVNLSRLARSIARELSDG
EPGRAVDFIIADGLTVEGDPGLLRAAMENILRNAWKYTAPKENAVIEFGRCEGEGERLYFIRDNGVGFDMAHKDKLFQPF
ERLHDARAFEGTGIGLATVKRIIDRHGGRIWAEGTPGAGATFYFTLPEPGGES
>Mature_533_residues
MESEHICKLLLDFAADWEFWLDPEGACRYVSPACERITGYRPDEFMGEAGLLRRIVHPEDREAVESHLTDALANREGVCP
IDFRIITRTGEVRWISHHCQPVHDGAGTFLGRRGSNRDITDRMAAQEENRRLGGLMERLVRVVQELSRARSLDEITAVVR
TAARELVSADGATFVLRENGNCFYADEDAIAPLWKGLRFPLERCISGWVMLNRQAAVIEDIYQDQRIPVEAYRPTFVQSL
AMVPIRGEDPIGAIGTYWARRHRPSEQEISVIQALADTTSVAMENVRVYADLEQRVRERTEALETANRELEAFGFSVSHD
LRGPLRRLDGYSRMLYEDYADRLEGEGRDILIRMIRLATRMEQLIDDLLRFSRSVKGEVVHEAVNLSRLARSIARELSDG
EPGRAVDFIIADGLTVEGDPGLLRAAMENILRNAWKYTAPKENAVIEFGRCEGEGERLYFIRDNGVGFDMAHKDKLFQPF
ERLHDARAFEGTGIGLATVKRIIDRHGGRIWAEGTPGAGATFYFTLPEPGGES

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1786600, Length=232, Percent_Identity=33.1896551724138, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI1788549, Length=251, Percent_Identity=29.4820717131474, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1790346, Length=263, Percent_Identity=30.0380228136882, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1786783, Length=281, Percent_Identity=28.1138790035587, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI87081816, Length=249, Percent_Identity=29.718875502008, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1786912, Length=255, Percent_Identity=31.3725490196078, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI145693157, Length=256, Percent_Identity=26.171875, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1789149, Length=259, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1790436, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI48994928, Length=251, Percent_Identity=26.2948207171315, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1789808, Length=222, Percent_Identity=28.8288288288288, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1788393, Length=257, Percent_Identity=27.6264591439689, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 60235; Mature: 60235

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESEHICKLLLDFAADWEFWLDPEGACRYVSPACERITGYRPDEFMGEAGLLRRIVHPED
CCHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHCCCCCHHHHCHHHHHHHHCCCCH
REAVESHLTDALANREGVCPIDFRIITRTGEVRWISHHCQPVHDGAGTFLGRRGSNRDIT
HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEHHCCCCCCCCCHHHHCCCCCCCCHH
DRMAAQEENRRLGGLMERLVRVVQELSRARSLDEITAVVRTAARELVSADGATFVLRENG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
NCFYADEDAIAPLWKGLRFPLERCISGWVMLNRQAAVIEDIYQDQRIPVEAYRPTFVQSL
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHCCHHHHHHH
AMVPIRGEDPIGAIGTYWARRHRPSEQEISVIQALADTTSVAMENVRVYADLEQRVRERT
HCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALETANRELEAFGFSVSHDLRGPLRRLDGYSRMLYEDYADRLEGEGRDILIRMIRLATR
HHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
MEQLIDDLLRFSRSVKGEVVHEAVNLSRLARSIARELSDGEPGRAVDFIIADGLTVEGDP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEECCCC
GLLRAAMENILRNAWKYTAPKENAVIEFGRCEGEGERLYFIRDNGVGFDMAHKDKLFQPF
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHH
ERLHDARAFEGTGIGLATVKRIIDRHGGRIWAEGTPGAGATFYFTLPEPGGES
HHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MESEHICKLLLDFAADWEFWLDPEGACRYVSPACERITGYRPDEFMGEAGLLRRIVHPED
CCHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHCCCCCHHHHCHHHHHHHHCCCCH
REAVESHLTDALANREGVCPIDFRIITRTGEVRWISHHCQPVHDGAGTFLGRRGSNRDIT
HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEHHCCCCCCCCCHHHHCCCCCCCCHH
DRMAAQEENRRLGGLMERLVRVVQELSRARSLDEITAVVRTAARELVSADGATFVLRENG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
NCFYADEDAIAPLWKGLRFPLERCISGWVMLNRQAAVIEDIYQDQRIPVEAYRPTFVQSL
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHCCHHHHHHH
AMVPIRGEDPIGAIGTYWARRHRPSEQEISVIQALADTTSVAMENVRVYADLEQRVRERT
HCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALETANRELEAFGFSVSHDLRGPLRRLDGYSRMLYEDYADRLEGEGRDILIRMIRLATR
HHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
MEQLIDDLLRFSRSVKGEVVHEAVNLSRLARSIARELSDGEPGRAVDFIIADGLTVEGDP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEECCCC
GLLRAAMENILRNAWKYTAPKENAVIEFGRCEGEGERLYFIRDNGVGFDMAHKDKLFQPF
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHH
ERLHDARAFEGTGIGLATVKRIIDRHGGRIWAEGTPGAGATFYFTLPEPGGES
HHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]