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The map label for this gene is 39998492

Identifier: 39998492

GI number: 39998492

Start: 3744939

End: 3746321

Strand: Reverse

Name: 39998492

Synonym: GSU3403

Alternate gene names: NA

Gene position: 3746321-3744939 (Counterclockwise)

Preceding gene: 39998493

Following gene: 39998491

Centisome position: 98.22

GC content: 57.12

Gene sequence:

>1383_bases
ATGGGTTTCAAGAAATCGCTCATCGCAGTCACCGCAACGGCGGCCATCGCCGCCTCCGCCGTCCCGGCCCTGGCCCTGGA
GAACGAGTTCCACGGCATGTTCCGGCTGAAAGGTGTCGTTAACAACTTTAACGCTACACCTGTGATCAGATTGCATGGAA
CCGTTGATACGCCGCTCGGATATGGTTTTTATGATCCGCAAGGCAAGGAAAAGGACGTGCCTACCGCCACTTACCTTGAG
CAGCGCGCCCGTCTCATGTACATTGCCAAGGCTAACGACGACCTGAAGTTGGTAACCCACTTCGAGATCGACTCCCGCTG
GGGCGACACCTCGTATACCTCCGGCCGCAACCGCGGCGGTGCGATCGGGGCCGATACGGTGAACATTGAAACCAAGAGCG
TCTACCTTGACTTCAACCTGCCTGCTACCGGCGTAAATTTCAAGGTGGGTATCCAGCCCTACAATGATGCATTCAAAGGG
GTACTCTTCGACGCCGACATGGCAGGAGTTCTCGCATCCCGTACGTTCGGCGACCTCGATGCGTCGGCCGGTTTCTTCCG
GTTCGACGACAAAGGGACGGTGCCCGGCAAGAAGACCCGTGACATGTTCGCCGCCACCGGCAAGTACGCCGTGACCAAAG
ACATTAAGGTCGGTGGCGCCTACTACTTCATTGACGATGACCGCAGCGAAGACGATGGATTCTCACTGCCCTACCTTTTC
CAAGAGCAAGGTTTCACGAACACCTATCACAACGTTGGCGTGAATGCCGAGGCCACCTTTGGTCCGGTGACCGTGGACGG
TTTCTTCCTCTACCAGTTCGGCACCCTCCGTGCGCCGGCTAACCGCCACGTCAGTGCCTTTGCCGGTAACGTGGGTGCTC
GCGCTCAGGTGGGCCCCGGCACCGCGCGGACGGAATTCCTCTATGTTTCCGGCGATAAGGGCGGCAGCGGCACCACCAAT
GCTTTCCAGAGCGTTCAAGATGAGCACGGCTATTATGGCGGCAACATGCAGATCCTTTTCCGTGACGCCTATGCCATGAC
CATCGATAATGCCATCGTTTATACCACGAACAATAAAGATCAGGGTGTAATCGCCGGCTTCGTGGGCTATGACCTCCCCA
TTACCTCCAAGTTTTCGGCCAGCGCCAATGCCGGCTTTGCCGCCGTTGCCAAGAAGAACGGCAATACCTCCAACGCGGAC
AACAGCAAGTACCTCGGCACGGAAATCAATGCCAGCCTTGAGTACAAAATGTTTGATAACATGAGCGCCATTGCCCGCGG
TGCGTATGTCGTTCTCGGCGACTATTACAGCGGCGTTGCCGCCGGTGGCCAGGACCCCGACGATCCCTACATGGCTTCGC
TCATTCTGAACTACGCGTTCTAA

Upstream 100 bases:

>100_bases
CCTCACAAAGAAGGGAGGTGGTTGGACACTCGCCGGTTGTACAAAGTAAAGCATCACAACCCTACAATGCTGTTAATTCA
TCGCAACGAAGGAGGAGTAC

Downstream 100 bases:

>100_bases
TTTCGACTTCGGCCGGGGCGTGTGACCGCCCCGGCCTCTTTCACCCGCTACCTTACTGATCGACAGGAGGTTTATCCCAT
GAAAAAGATGGCTGTTCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Porin OmpJ; OmpJ-Like Porin

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MGFKKSLIAVTATAAIAASAVPALALENEFHGMFRLKGVVNNFNATPVIRLHGTVDTPLGYGFYDPQGKEKDVPTATYLE
QRARLMYIAKANDDLKLVTHFEIDSRWGDTSYTSGRNRGGAIGADTVNIETKSVYLDFNLPATGVNFKVGIQPYNDAFKG
VLFDADMAGVLASRTFGDLDASAGFFRFDDKGTVPGKKTRDMFAATGKYAVTKDIKVGGAYYFIDDDRSEDDGFSLPYLF
QEQGFTNTYHNVGVNAEATFGPVTVDGFFLYQFGTLRAPANRHVSAFAGNVGARAQVGPGTARTEFLYVSGDKGGSGTTN
AFQSVQDEHGYYGGNMQILFRDAYAMTIDNAIVYTTNNKDQGVIAGFVGYDLPITSKFSASANAGFAAVAKKNGNTSNAD
NSKYLGTEINASLEYKMFDNMSAIARGAYVVLGDYYSGVAAGGQDPDDPYMASLILNYAF

Sequences:

>Translated_460_residues
MGFKKSLIAVTATAAIAASAVPALALENEFHGMFRLKGVVNNFNATPVIRLHGTVDTPLGYGFYDPQGKEKDVPTATYLE
QRARLMYIAKANDDLKLVTHFEIDSRWGDTSYTSGRNRGGAIGADTVNIETKSVYLDFNLPATGVNFKVGIQPYNDAFKG
VLFDADMAGVLASRTFGDLDASAGFFRFDDKGTVPGKKTRDMFAATGKYAVTKDIKVGGAYYFIDDDRSEDDGFSLPYLF
QEQGFTNTYHNVGVNAEATFGPVTVDGFFLYQFGTLRAPANRHVSAFAGNVGARAQVGPGTARTEFLYVSGDKGGSGTTN
AFQSVQDEHGYYGGNMQILFRDAYAMTIDNAIVYTTNNKDQGVIAGFVGYDLPITSKFSASANAGFAAVAKKNGNTSNAD
NSKYLGTEINASLEYKMFDNMSAIARGAYVVLGDYYSGVAAGGQDPDDPYMASLILNYAF
>Mature_459_residues
GFKKSLIAVTATAAIAASAVPALALENEFHGMFRLKGVVNNFNATPVIRLHGTVDTPLGYGFYDPQGKEKDVPTATYLEQ
RARLMYIAKANDDLKLVTHFEIDSRWGDTSYTSGRNRGGAIGADTVNIETKSVYLDFNLPATGVNFKVGIQPYNDAFKGV
LFDADMAGVLASRTFGDLDASAGFFRFDDKGTVPGKKTRDMFAATGKYAVTKDIKVGGAYYFIDDDRSEDDGFSLPYLFQ
EQGFTNTYHNVGVNAEATFGPVTVDGFFLYQFGTLRAPANRHVSAFAGNVGARAQVGPGTARTEFLYVSGDKGGSGTTNA
FQSVQDEHGYYGGNMQILFRDAYAMTIDNAIVYTTNNKDQGVIAGFVGYDLPITSKFSASANAGFAAVAKKNGNTSNADN
SKYLGTEINASLEYKMFDNMSAIARGAYVVLGDYYSGVAAGGQDPDDPYMASLILNYAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49499; Mature: 49367

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFKKSLIAVTATAAIAASAVPALALENEFHGMFRLKGVVNNFNATPVIRLHGTVDTPLG
CCCCCCEEEEEHHHHHHHHHCCCEEECCCCCCEEEEEEHHCCCCCCEEEEEECCCCCCCC
YGFYDPQGKEKDVPTATYLEQRARLMYIAKANDDLKLVTHFEIDSRWGDTSYTSGRNRGG
CCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCC
AIGADTVNIETKSVYLDFNLPATGVNFKVGIQPYNDAFKGVLFDADMAGVLASRTFGDLD
CCCCCEEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHCCCCCCC
ASAGFFRFDDKGTVPGKKTRDMFAATGKYAVTKDIKVGGAYYFIDDDRSEDDGFSLPYLF
CCCCEEEECCCCCCCCCCCHHHHHCCCCEEEEEEEEECEEEEEEECCCCCCCCCCCCEEE
QEQGFTNTYHNVGVNAEATFGPVTVDGFFLYQFGTLRAPANRHVSAFAGNVGARAQVGPG
ECCCCCCCHHCCCCCCCCCCCCEEECEEEEEEECEECCCCCCCEEEEECCCCCEEEECCC
TARTEFLYVSGDKGGSGTTNAFQSVQDEHGYYGGNMQILFRDAYAMTIDNAIVYTTNNKD
CCEEEEEEEECCCCCCCCCHHHHHHHHHCCEECCCEEEEEEEEEEEEECCEEEEEECCCC
QGVIAGFVGYDLPITSKFSASANAGFAAVAKKNGNTSNADNSKYLGTEINASLEYKMFDN
CCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECEEECCEEEEEECCC
MSAIARGAYVVLGDYYSGVAAGGQDPDDPYMASLILNYAF
HHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GFKKSLIAVTATAAIAASAVPALALENEFHGMFRLKGVVNNFNATPVIRLHGTVDTPLG
CCCCCEEEEEHHHHHHHHHCCCEEECCCCCCEEEEEEHHCCCCCCEEEEEECCCCCCCC
YGFYDPQGKEKDVPTATYLEQRARLMYIAKANDDLKLVTHFEIDSRWGDTSYTSGRNRGG
CCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCC
AIGADTVNIETKSVYLDFNLPATGVNFKVGIQPYNDAFKGVLFDADMAGVLASRTFGDLD
CCCCCEEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHCCCCCCC
ASAGFFRFDDKGTVPGKKTRDMFAATGKYAVTKDIKVGGAYYFIDDDRSEDDGFSLPYLF
CCCCEEEECCCCCCCCCCCHHHHHCCCCEEEEEEEEECEEEEEEECCCCCCCCCCCCEEE
QEQGFTNTYHNVGVNAEATFGPVTVDGFFLYQFGTLRAPANRHVSAFAGNVGARAQVGPG
ECCCCCCCHHCCCCCCCCCCCCEEECEEEEEEECEECCCCCCCEEEEECCCCCEEEECCC
TARTEFLYVSGDKGGSGTTNAFQSVQDEHGYYGGNMQILFRDAYAMTIDNAIVYTTNNKD
CCEEEEEEEECCCCCCCCCHHHHHHHHHCCEECCCEEEEEEEEEEEEECCEEEEEECCCC
QGVIAGFVGYDLPITSKFSASANAGFAAVAKKNGNTSNADNSKYLGTEINASLEYKMFDN
CCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECEEECCEEEEEECCC
MSAIARGAYVVLGDYYSGVAAGGQDPDDPYMASLILNYAF
HHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA