| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998441
Identifier: 39998441
GI number: 39998441
Start: 3683584
End: 3683970
Strand: Direct
Name: 39998441
Synonym: GSU3352
Alternate gene names: NA
Gene position: 3683584-3683970 (Clockwise)
Preceding gene: 39998440
Following gene: 39998444
Centisome position: 96.58
GC content: 64.6
Gene sequence:
>387_bases ATGCCGTCATCCCCCCGCCGGGTTTCCTTGCCCATTCAATCAGTCAGAACAGCCCACCGCTCATCGATCGGCCGGGGCGT CATCCTTCTGGCCGGACGCGGCAGGGCAGTCCTTCGGCCCCATGCCTTGCTTGGCGCAGCCGCGCTTCGTGCCGCGGCCC TTGCCGCCTTTCTTGCAGCAGGAGCCATCCGCCGGGGCGTCGCAATCACAACAGCAACAGCAGCATCCCTGCCCATCCCG AGCCTCCTCCTTCATGCAGCAGCCGCGACCCGCCTTCTTCTGTGCCGCCGCAGCCGTAGTGGTCGAAACCTTCTCCACTG CACCGAGTGGGGCGGCGGCAAGGCTGAGAACCATGGCAGCAGCAATCGTGACAAAAATGTTTCGTAG
Upstream 100 bases:
>100_bases ATCTTCAAGGCCCACCGGGGAGAGCTCCACTACCGGTGGAGCCACGGGGAGAGCTTTGTCCGGGTAAGCTGGTTCCGTTA AGCGACAACGGGGGGATGAC
Downstream 100 bases:
>100_bases CATAAACCCCTCCGTTACGTAATTTCGTTCTCTTTATCTCCGGATTTAAACGAAAAATCAAGTCAATACGTCATGCGCCG CCGAACTGGATTCCGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MPSSPRRVSLPIQSVRTAHRSSIGRGVILLAGRGRAVLRPHALLGAAALRAAALAAFLAAGAIRRGVAITTATAASLPIP SLLLHAAAATRLLLCRRSRSGRNLLHCTEWGGGKAENHGSSNRDKNVS
Sequences:
>Translated_128_residues MPSSPRRVSLPIQSVRTAHRSSIGRGVILLAGRGRAVLRPHALLGAAALRAAALAAFLAAGAIRRGVAITTATAASLPIP SLLLHAAAATRLLLCRRSRSGRNLLHCTEWGGGKAENHGSSNRDKNVS >Mature_127_residues PSSPRRVSLPIQSVRTAHRSSIGRGVILLAGRGRAVLRPHALLGAAALRAAALAAFLAAGAIRRGVAITTATAASLPIPS LLLHAAAATRLLLCRRSRSGRNLLHCTEWGGGKAENHGSSNRDKNVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13267; Mature: 13135
Theoretical pI: Translated: 12.77; Mature: 12.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSPRRVSLPIQSVRTAHRSSIGRGVILLAGRGRAVLRPHALLGAAALRAAALAAFLAA CCCCCCEEECCHHHHHHHHHHCCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHH GAIRRGVAITTATAASLPIPSLLLHAAAATRLLLCRRSRSGRNLLHCTEWGGGKAENHGS HHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC SNRDKNVS CCCCCCCC >Mature Secondary Structure PSSPRRVSLPIQSVRTAHRSSIGRGVILLAGRGRAVLRPHALLGAAALRAAALAAFLAA CCCCCEEECCHHHHHHHHHHCCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHH GAIRRGVAITTATAASLPIPSLLLHAAAATRLLLCRRSRSGRNLLHCTEWGGGKAENHGS HHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC SNRDKNVS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA