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The map label for this gene is 39998413

Identifier: 39998413

GI number: 39998413

Start: 3651999

End: 3652637

Strand: Reverse

Name: 39998413

Synonym: GSU3324

Alternate gene names: NA

Gene position: 3652637-3651999 (Counterclockwise)

Preceding gene: 39998415

Following gene: 39998409

Centisome position: 95.77

GC content: 64.16

Gene sequence:

>639_bases
ATGGAAAGTGCGCGAAACGGGGCAGAGTCGCCCCTGGGAGGGCGCATCAGGAAACTTCGTCAGGCACGGGGCATGACCCA
GAAGGCGTTTGCCGACTCCCTCGGCATCGTCCAGGGGTTTCTGAGCAGTATCGAACGGGGCAGAAAGGTCCCTTCAGACA
CGCTCGTCATTGCGCTCTGCCGGACTTACGGAGTCAACGTGACCTGGCTTCTCCAGGGAAAGGGCGCCATGAACGCCCCC
CCTGACGGCGCGGGCGAGGGGGCAGGCGAGGGGACTCCGCTGCTGGAGAGCGTTCCCCAGGGATTTCCCGAGGATATTCC
GGGGGATGTGGTGCAGGGTCGGATTGTCTTCCCCGGGATGCCGCAGGGGTGTTATGCGGTGCTCGCCTACGGCGATTTCA
TGGCTCCCACAATCCGCGACGGGGATATGGTTCTCTTCGACCCGGCACGGCCGGCAGCGCCGGGCGAGATCGTGCTCGTC
ACCAACCGGTGGGGAGAAGCCATTCTCCGCCGTTATCGCCTCAAGGCCGGCGAACTGTTGTTCTCCCCCGACAATGCCGC
CTATTCCCCGTTCCATCCCGATCCCGACACCCGGATCATCGGCACGGTGGTGCAGGTCTGGCGGAACGTGAAGCTGTAG

Upstream 100 bases:

>100_bases
GCAGTCCCAAAGAGATGATATATTGACTTGCAATACTTTATCTGTCAGTAATGTTCAGTGTAGATAAAGCCCGCCGCTGG
TATATCAGGGAGATAATGTC

Downstream 100 bases:

>100_bases
CCCGCAGTGCCCCGACCGCGGCCGGATGTACGGACTGGATGAGGTCCCACGGCCCCGGTGGGCCATGGTCGTCTGTGGCC
ACGCCATGCCGGGTTCCGGC

Product: Cro/CI family transcriptional regulator

Products: NA

Alternate protein names: LexA-Like Helix-Turn-Helix Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Peptidase; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MESARNGAESPLGGRIRKLRQARGMTQKAFADSLGIVQGFLSSIERGRKVPSDTLVIALCRTYGVNVTWLLQGKGAMNAP
PDGAGEGAGEGTPLLESVPQGFPEDIPGDVVQGRIVFPGMPQGCYAVLAYGDFMAPTIRDGDMVLFDPARPAAPGEIVLV
TNRWGEAILRRYRLKAGELLFSPDNAAYSPFHPDPDTRIIGTVVQVWRNVKL

Sequences:

>Translated_212_residues
MESARNGAESPLGGRIRKLRQARGMTQKAFADSLGIVQGFLSSIERGRKVPSDTLVIALCRTYGVNVTWLLQGKGAMNAP
PDGAGEGAGEGTPLLESVPQGFPEDIPGDVVQGRIVFPGMPQGCYAVLAYGDFMAPTIRDGDMVLFDPARPAAPGEIVLV
TNRWGEAILRRYRLKAGELLFSPDNAAYSPFHPDPDTRIIGTVVQVWRNVKL
>Mature_212_residues
MESARNGAESPLGGRIRKLRQARGMTQKAFADSLGIVQGFLSSIERGRKVPSDTLVIALCRTYGVNVTWLLQGKGAMNAP
PDGAGEGAGEGTPLLESVPQGFPEDIPGDVVQGRIVFPGMPQGCYAVLAYGDFMAPTIRDGDMVLFDPARPAAPGEIVLV
TNRWGEAILRRYRLKAGELLFSPDNAAYSPFHPDPDTRIIGTVVQVWRNVKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22820; Mature: 22820

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESARNGAESPLGGRIRKLRQARGMTQKAFADSLGIVQGFLSSIERGRKVPSDTLVIALC
CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RTYGVNVTWLLQGKGAMNAPPDGAGEGAGEGTPLLESVPQGFPEDIPGDVVQGRIVFPGM
HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHCCEEEECCC
PQGCYAVLAYGDFMAPTIRDGDMVLFDPARPAAPGEIVLVTNRWGEAILRRYRLKAGELL
CHHHEEEEHHCCCCCCEECCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEE
FSPDNAAYSPFHPDPDTRIIGTVVQVWRNVKL
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MESARNGAESPLGGRIRKLRQARGMTQKAFADSLGIVQGFLSSIERGRKVPSDTLVIALC
CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RTYGVNVTWLLQGKGAMNAPPDGAGEGAGEGTPLLESVPQGFPEDIPGDVVQGRIVFPGM
HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHCCEEEECCC
PQGCYAVLAYGDFMAPTIRDGDMVLFDPARPAAPGEIVLVTNRWGEAILRRYRLKAGELL
CHHHEEEEHHCCCCCCEECCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEE
FSPDNAAYSPFHPDPDTRIIGTVVQVWRNVKL
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA