| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is glmM [H]
Identifier: 39998410
GI number: 39998410
Start: 3647128
End: 3648537
Strand: Direct
Name: glmM [H]
Synonym: GSU3321
Alternate gene names: 39998410
Gene position: 3647128-3648537 (Clockwise)
Preceding gene: 39998406
Following gene: 39998411
Centisome position: 95.62
GC content: 66.81
Gene sequence:
>1410_bases GTGCAGATAACATTCGGCACCGACGGCTGGCGGGGGATCATCGCCCGGGAGTTTACCTTCGACAATCTCTCCCGGGTGGC CCAGGCCACCATGGATTACCTGAAGCGGGAAGGGCTCGCTGCGCGCGGGCTCGTCGTGGGGTATGATCGCCGCTTCCTCT CCCGGGACTTCGCCGACCGCGTGGCCGAGATTGCCGCAGGCAACGGCATCCGGGTCTGGCTGACCGACGGTCCGGCTCCC ACTCCGGCCATTTCCTGGGCCGTCCACGAGATGAAGGCGGGCGCCGGCGTCATGATCACCGCCAGCCACAATCCTCCCGC CTATAACGGGTTCAAGGTCAAGGAATCCTTCGGCGGCTCGGCCCGCCCCGCCACCACCAGGATTCTGGAGGAGATCACCG CCGCCAACACCGCTGCCGGCCGAGGCATCGAGGAACGTCCCCTGGCGGCGGCGCTGGCCGATGGTACCGTAACCATCTTC GACCCGCGTGAGGGTTATTGCCGTCAGCTCGCCCGTTACGTGGACCTGGATCTTATCCGCCAGGCCGCCATCCCCCTGGC GGTGGACCCGATGCACGGTGCCGGGGCCGGCGTCATTCCGGAACTCGTGCCCGGCGCCCTGGAGATCCACGGGGATGAGA ACCCCGGATTCAGGGGAGTCCCCCCCGAGCCCACCGAAGAGCACCTGCAGGAGCTGGCGACGCTCGTGCGGGACGGCGTC TGCCGGGTGGGACTGGCCCTCGACGGCGACGCGGACCGGATCGGCGCCGTGGACGAAAACGGCGAGTTTTTCTCCTCCCA CCGGATCTTCACCGTGATCCTTCGGCACCTGGTGGAGCGCAAGGGCCTCACCGGCGGGGTGGTCAAGACGGTCTCCACCA CACGGATGATCGATCTGCTGGCGCAGAAGTACGGGCTTCCCCTCCACGAAACCCCCATCGGCTTCAAGCATATCTGCGAG CTGATGCTCGAGCACGACATCCTCATGGGTGGCGAGGAGTCGGGAGGGCTCGGGGTAAAGGGACACATCCCCGAGCGGGA CGGGGTCCTCATGGGGCTCCTGCTTCTGGAAGCCATGGCCATGAGCGGCAAGGGGCTTCGCCGGTTGCTGGACGAAACCA TGGACGAAATCGGCGTCTTCCACTACCAGCGGCTCGATCTCCCCATCGAGGATGCCCCCAAGGCAGCCCTCATTACCCGG CTGCGGGAGGAGCGGATCGACGCCATTGCGGGACGGCCGGTGGCCGGCACCAATTTCCGCGACGGCTTCAAGTTCATGTT CGAAGATGGCTCCTGGCTCCTGATCCGCCCGTCAGGGACCGAACCGGTGCTGCGCCTCTACAGCGAGGCCGGCACGCCCG GGACCGTTGGGGAACTACTGGCGGCCGGCCGGGAAATCGCAGGGGTCTGA
Upstream 100 bases:
>100_bases AACAAACAAATGGTTGACTTGACGGGGGGATGTGCGGAAAATGTCGGGTTACCGGCCCGATGGCCGCAACCATACCGACA TTGCAGGAGGATTTGATTCC
Downstream 100 bases:
>100_bases CCGGAGAGGGCAGTGGCCGCTTGACCCCTGCCATCCTTGCATCTACAATCGTTGTAACGTGGCAACATCCTGAATTTCTG GCAGAAAGCGGTGCACTATG
Product: phosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MQITFGTDGWRGIIAREFTFDNLSRVAQATMDYLKREGLAARGLVVGYDRRFLSRDFADRVAEIAAGNGIRVWLTDGPAP TPAISWAVHEMKAGAGVMITASHNPPAYNGFKVKESFGGSARPATTRILEEITAANTAAGRGIEERPLAAALADGTVTIF DPREGYCRQLARYVDLDLIRQAAIPLAVDPMHGAGAGVIPELVPGALEIHGDENPGFRGVPPEPTEEHLQELATLVRDGV CRVGLALDGDADRIGAVDENGEFFSSHRIFTVILRHLVERKGLTGGVVKTVSTTRMIDLLAQKYGLPLHETPIGFKHICE LMLEHDILMGGEESGGLGVKGHIPERDGVLMGLLLLEAMAMSGKGLRRLLDETMDEIGVFHYQRLDLPIEDAPKAALITR LREERIDAIAGRPVAGTNFRDGFKFMFEDGSWLLIRPSGTEPVLRLYSEAGTPGTVGELLAAGREIAGV
Sequences:
>Translated_469_residues MQITFGTDGWRGIIAREFTFDNLSRVAQATMDYLKREGLAARGLVVGYDRRFLSRDFADRVAEIAAGNGIRVWLTDGPAP TPAISWAVHEMKAGAGVMITASHNPPAYNGFKVKESFGGSARPATTRILEEITAANTAAGRGIEERPLAAALADGTVTIF DPREGYCRQLARYVDLDLIRQAAIPLAVDPMHGAGAGVIPELVPGALEIHGDENPGFRGVPPEPTEEHLQELATLVRDGV CRVGLALDGDADRIGAVDENGEFFSSHRIFTVILRHLVERKGLTGGVVKTVSTTRMIDLLAQKYGLPLHETPIGFKHICE LMLEHDILMGGEESGGLGVKGHIPERDGVLMGLLLLEAMAMSGKGLRRLLDETMDEIGVFHYQRLDLPIEDAPKAALITR LREERIDAIAGRPVAGTNFRDGFKFMFEDGSWLLIRPSGTEPVLRLYSEAGTPGTVGELLAAGREIAGV >Mature_469_residues MQITFGTDGWRGIIAREFTFDNLSRVAQATMDYLKREGLAARGLVVGYDRRFLSRDFADRVAEIAAGNGIRVWLTDGPAP TPAISWAVHEMKAGAGVMITASHNPPAYNGFKVKESFGGSARPATTRILEEITAANTAAGRGIEERPLAAALADGTVTIF DPREGYCRQLARYVDLDLIRQAAIPLAVDPMHGAGAGVIPELVPGALEIHGDENPGFRGVPPEPTEEHLQELATLVRDGV CRVGLALDGDADRIGAVDENGEFFSSHRIFTVILRHLVERKGLTGGVVKTVSTTRMIDLLAQKYGLPLHETPIGFKHICE LMLEHDILMGGEESGGLGVKGHIPERDGVLMGLLLLEAMAMSGKGLRRLLDETMDEIGVFHYQRLDLPIEDAPKAALITR LREERIDAIAGRPVAGTNFRDGFKFMFEDGSWLLIRPSGTEPVLRLYSEAGTPGTVGELLAAGREIAGV
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=491, Percent_Identity=25.4582484725051, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI21361621, Length=468, Percent_Identity=26.4957264957265, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI133922562, Length=487, Percent_Identity=25.6673511293634, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI31377548, Length=532, Percent_Identity=27.2556390977444, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI63055049, Length=535, Percent_Identity=24.6728971962617, Blast_Score=93, Evalue=6e-19, Organism=Homo sapiens, GI290463104, Length=307, Percent_Identity=24.4299674267101, Blast_Score=73, Evalue=5e-13, Organism=Escherichia coli, GI1786904, Length=488, Percent_Identity=31.1475409836066, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1789566, Length=463, Percent_Identity=25.0539956803456, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1788361, Length=464, Percent_Identity=24.5689655172414, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17535441, Length=518, Percent_Identity=26.6409266409266, Blast_Score=125, Evalue=7e-29, Organism=Caenorhabditis elegans, GI71993870, Length=520, Percent_Identity=24.6153846153846, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71993878, Length=283, Percent_Identity=27.5618374558304, Blast_Score=75, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323752, Length=412, Percent_Identity=27.4271844660194, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6322722, Length=497, Percent_Identity=26.9617706237425, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6323934, Length=428, Percent_Identity=25, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI17864244, Length=506, Percent_Identity=27.0750988142292, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI20129809, Length=526, Percent_Identity=25.4752851711027, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24651977, Length=386, Percent_Identity=25.6476683937824, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI24653722, Length=447, Percent_Identity=24.3847874720358, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 50701; Mature: 50701
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQITFGTDGWRGIIAREFTFDNLSRVAQATMDYLKREGLAARGLVVGYDRRFLSRDFADR CEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHH VAEIAAGNGIRVWLTDGPAPTPAISWAVHEMKAGAGVMITASHNPPAYNGFKVKESFGGS HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEHHCCCCC ARPATTRILEEITAANTAAGRGIEERPLAAALADGTVTIFDPREGYCRQLARYVDLDLIR CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHH QAAIPLAVDPMHGAGAGVIPELVPGALEIHGDENPGFRGVPPEPTEEHLQELATLVRDGV HHCCCEEECCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCC CRVGLALDGDADRIGAVDENGEFFSSHRIFTVILRHLVERKGLTGGVVKTVSTTRMIDLL EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AQKYGLPLHETPIGFKHICELMLEHDILMGGEESGGLGVKGHIPERDGVLMGLLLLEAMA HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH MSGKGLRRLLDETMDEIGVFHYQRLDLPIEDAPKAALITRLREERIDAIAGRPVAGTNFR HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC DGFKFMFEDGSWLLIRPSGTEPVLRLYSEAGTPGTVGELLAAGREIAGV CCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCHHHCCC >Mature Secondary Structure MQITFGTDGWRGIIAREFTFDNLSRVAQATMDYLKREGLAARGLVVGYDRRFLSRDFADR CEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHH VAEIAAGNGIRVWLTDGPAPTPAISWAVHEMKAGAGVMITASHNPPAYNGFKVKESFGGS HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEHHCCCCC ARPATTRILEEITAANTAAGRGIEERPLAAALADGTVTIFDPREGYCRQLARYVDLDLIR CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHH QAAIPLAVDPMHGAGAGVIPELVPGALEIHGDENPGFRGVPPEPTEEHLQELATLVRDGV HHCCCEEECCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCC CRVGLALDGDADRIGAVDENGEFFSSHRIFTVILRHLVERKGLTGGVVKTVSTTRMIDLL EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AQKYGLPLHETPIGFKHICELMLEHDILMGGEESGGLGVKGHIPERDGVLMGLLLLEAMA HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH MSGKGLRRLLDETMDEIGVFHYQRLDLPIEDAPKAALITRLREERIDAIAGRPVAGTNFR HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC DGFKFMFEDGSWLLIRPSGTEPVLRLYSEAGTPGTVGELLAAGREIAGV CCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA