Click here to switch to the map view.

The map label for this gene is 39998316

Identifier: 39998316

GI number: 39998316

Start: 3538273

End: 3540003

Strand: Direct

Name: 39998316

Synonym: GSU3226

Alternate gene names: NA

Gene position: 3538273-3540003 (Clockwise)

Preceding gene: 39998315

Following gene: 39998317

Centisome position: 92.77

GC content: 64.12

Gene sequence:

>1731_bases
ATGGCAGCACGACCCATGATAACGGCACTGGTCTTCTTCCTGGGAACGGCGGCCCCGGCGGCGGCCCTCTCTCCCTCCCT
GAGCGTGACCGATTCTCACAACCGCCACAACCTGTCCGTAAGCGGCCCGGGGCTCACCGGTGCGACCCGCGCCTCCACCG
AAGAGCGGGTCTGCATTTTCTGCCATACGCCCCACCACGCCACGAGCATAACCCCCCTCTGGAGCCGCGAGTTGTCCAGC
GCGCTCTACACCCCCTACGACTCGTCGACCCTCAAGGCAATCCAGAAACCGGGCCAGCCTACCGGCGCATCCCGTCTTTG
CCTGGGGTGTCATGACGGCACCATCGCCCCCGGCATGCTCTCGGGGGGCAAGATGATCGCGGGGCTGCCGACCCTGCCCA
CGAATGTGCGCTCGAACCTGTCCACTGATCTCTCCGACGACCATCCCATTTCCTTTCCCTATGCCGGATCCATCTCGGTC
GCCGCCGTGCTCCGGCTGCCGGCCGAACTGCCGCCCGAAATCTCGCTCGAAGACGGCAGAATCGAATGCACCAGCTGCCA
CGATCCCCACAAGGACCGCTACCCTCCGGCTGATCATCCGCAGAAATCGGGGAAATTCCTGGTGCTCGACAACAACAATT
ACTCGGCCCTCTGCACCGCCTGCCACAGCCGCGCCGGGCTCACGGAGGGCGCCCACTACCTGCCGGGCGATCCCTGCGAA
AGCTGTCACCAGGTCCACCGGGCCGATCAGCCGGCACGGCTGCTGAAGGGAGCCAATGTGCAGGAGACCTGCGTCCTCAC
CTGCCACAACGGAACCGGCACGGTGGAAACATCCGGGACCGACATCCGCTCCGCATCGGTCTTCGGCAAAGCTCATCAGA
CCGGCCGGCTCGTTCTTTCCGGCAGGCACGACGCCGACGAGAACCCCCTCGACTTCGAGCCGTCACAGCCGCACGTGGAG
TGCGTCGATTGCCACAATCCCTGCATCACCCGTCATGAATCAACACCTCTTGCTTCGCCGCCGACGCTGAACGGCCGGCT
CGTAGGGGTTACCATCGCCAAGTCGCCCGACGGCATCAAGACTTACGCCGACAGCGAATATGCCATCTGCTACAAATGCC
ACGGCGACCGGAGTTTCGTGCCCCCGGCCGTGCCCCGCAGGGTCCAGACCGGTGACCAGAGCCTCCGCTTTGCCCAGGAA
AACCCCTCGTATCACCCGGTATCGGCGCCGGGCAAAGGGATGAGCGTGCCAAGCCTGCGCTTTGAAATCGTCGGGTTCAG
GCCCGCTCGGACCCTCTCCATCTCAAGCCTCATCTACTGCACCGATTGCCATTCGAGCAACAAGGGCAGCAAGGTGGGGG
GGAGCGGCGCATCCGGACCCCACGGCTCCGATTACCAGCCAATCCTGATGGACCGCTACGAGCACGACACCTATCCCCTC
GCCTATGCCGAGAGCAACTACTCCCTCTGCTTCCGTTGCCATGACCAGACGATTCTGCTGGACCCGGGCCGATCGGCGTT
TCCGCTCCACCAGTCCCACCTGGTCAACCATCAGGTACCCTGCTCAGTCTGCCACGACCCCCATGGCGTTCCCCTGGTTC
TGGGGGGCACCACGGCTGCAAACAGCCACCTGATCAACTTCGATACCCGCTTCGTCACCACCGGCAGCTATGACTCTCCG
GGTCGCAGCTGCACCGTGAGTTGCCACTCGGCCAACCCGAGAACCTACTGA

Upstream 100 bases:

>100_bases
ATGTCTCCGATACGTATAACCAGCGGGTACAGGTCTTCCGCTACCTGAAGGAAGAGCCCTGGGGGCAGGACCCCCACACC
CCCGACTAAAGGTGGACACC

Downstream 100 bases:

>100_bases
GATACCCCCCAGAATCGCCCGGCGGTTCTGGGGGATTTCCCCCGTACCCCCCAGAAACATAGGGTGAATATACCCCACTC
CCCCCCGTTTTCCTGTCCAT

Product: cytochrome C

Products: NA

Alternate protein names: Multiheme Cytochrome; Multiheme C-Type Cytochrome

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MAARPMITALVFFLGTAAPAAALSPSLSVTDSHNRHNLSVSGPGLTGATRASTEERVCIFCHTPHHATSITPLWSRELSS
ALYTPYDSSTLKAIQKPGQPTGASRLCLGCHDGTIAPGMLSGGKMIAGLPTLPTNVRSNLSTDLSDDHPISFPYAGSISV
AAVLRLPAELPPEISLEDGRIECTSCHDPHKDRYPPADHPQKSGKFLVLDNNNYSALCTACHSRAGLTEGAHYLPGDPCE
SCHQVHRADQPARLLKGANVQETCVLTCHNGTGTVETSGTDIRSASVFGKAHQTGRLVLSGRHDADENPLDFEPSQPHVE
CVDCHNPCITRHESTPLASPPTLNGRLVGVTIAKSPDGIKTYADSEYAICYKCHGDRSFVPPAVPRRVQTGDQSLRFAQE
NPSYHPVSAPGKGMSVPSLRFEIVGFRPARTLSISSLIYCTDCHSSNKGSKVGGSGASGPHGSDYQPILMDRYEHDTYPL
AYAESNYSLCFRCHDQTILLDPGRSAFPLHQSHLVNHQVPCSVCHDPHGVPLVLGGTTAANSHLINFDTRFVTTGSYDSP
GRSCTVSCHSANPRTY

Sequences:

>Translated_576_residues
MAARPMITALVFFLGTAAPAAALSPSLSVTDSHNRHNLSVSGPGLTGATRASTEERVCIFCHTPHHATSITPLWSRELSS
ALYTPYDSSTLKAIQKPGQPTGASRLCLGCHDGTIAPGMLSGGKMIAGLPTLPTNVRSNLSTDLSDDHPISFPYAGSISV
AAVLRLPAELPPEISLEDGRIECTSCHDPHKDRYPPADHPQKSGKFLVLDNNNYSALCTACHSRAGLTEGAHYLPGDPCE
SCHQVHRADQPARLLKGANVQETCVLTCHNGTGTVETSGTDIRSASVFGKAHQTGRLVLSGRHDADENPLDFEPSQPHVE
CVDCHNPCITRHESTPLASPPTLNGRLVGVTIAKSPDGIKTYADSEYAICYKCHGDRSFVPPAVPRRVQTGDQSLRFAQE
NPSYHPVSAPGKGMSVPSLRFEIVGFRPARTLSISSLIYCTDCHSSNKGSKVGGSGASGPHGSDYQPILMDRYEHDTYPL
AYAESNYSLCFRCHDQTILLDPGRSAFPLHQSHLVNHQVPCSVCHDPHGVPLVLGGTTAANSHLINFDTRFVTTGSYDSP
GRSCTVSCHSANPRTY
>Mature_575_residues
AARPMITALVFFLGTAAPAAALSPSLSVTDSHNRHNLSVSGPGLTGATRASTEERVCIFCHTPHHATSITPLWSRELSSA
LYTPYDSSTLKAIQKPGQPTGASRLCLGCHDGTIAPGMLSGGKMIAGLPTLPTNVRSNLSTDLSDDHPISFPYAGSISVA
AVLRLPAELPPEISLEDGRIECTSCHDPHKDRYPPADHPQKSGKFLVLDNNNYSALCTACHSRAGLTEGAHYLPGDPCES
CHQVHRADQPARLLKGANVQETCVLTCHNGTGTVETSGTDIRSASVFGKAHQTGRLVLSGRHDADENPLDFEPSQPHVEC
VDCHNPCITRHESTPLASPPTLNGRLVGVTIAKSPDGIKTYADSEYAICYKCHGDRSFVPPAVPRRVQTGDQSLRFAQEN
PSYHPVSAPGKGMSVPSLRFEIVGFRPARTLSISSLIYCTDCHSSNKGSKVGGSGASGPHGSDYQPILMDRYEHDTYPLA
YAESNYSLCFRCHDQTILLDPGRSAFPLHQSHLVNHQVPCSVCHDPHGVPLVLGGTTAANSHLINFDTRFVTTGSYDSPG
RSCTVSCHSANPRTY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61650; Mature: 61518

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARPMITALVFFLGTAAPAAALSPSLSVTDSHNRHNLSVSGPGLTGATRASTEERVCIF
CCCCHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEE
CHTPHHATSITPLWSRELSSALYTPYDSSTLKAIQKPGQPTGASRLCLGCHDGTIAPGML
EECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC
SGGKMIAGLPTLPTNVRSNLSTDLSDDHPISFPYAGSISVAAVLRLPAELPPEISLEDGR
CCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCCEECCCE
IECTSCHDPHKDRYPPADHPQKSGKFLVLDNNNYSALCTACHSRAGLTEGAHYLPGDPCE
EEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHH
SCHQVHRADQPARLLKGANVQETCVLTCHNGTGTVETSGTDIRSASVFGKAHQTGRLVLS
HHHHHHCCCCCHHHHCCCCCCEEEEEEEECCCCEEEECCCCCCHHHHHCCCCCCCEEEEE
GRHDADENPLDFEPSQPHVECVDCHNPCITRHESTPLASPPTLNGRLVGVTIAKSPDGIK
CCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCEEEEEEEECCCCCCE
TYADSEYAICYKCHGDRSFVPPAVPRRVQTGDQSLRFAQENPSYHPVSAPGKGMSVPSLR
EECCCCEEEEEEECCCCCCCCCCCCCHHCCCCHHEEEHHCCCCCCCCCCCCCCCCCCCEE
FEIVGFRPARTLSISSLIYCTDCHSSNKGSKVGGSGASGPHGSDYQPILMDRYEHDTYPL
EEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEE
AYAESNYSLCFRCHDQTILLDPGRSAFPLHQSHLVNHQVPCSVCHDPHGVPLVLGGTTAA
EEECCCCEEEEEECCCEEEECCCCCCCCCHHHHHCCCCCCHHCCCCCCCCEEEEECCCCC
NSHLINFDTRFVTTGSYDSPGRSCTVSCHSANPRTY
CCEEEEECEEEEEECCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
AARPMITALVFFLGTAAPAAALSPSLSVTDSHNRHNLSVSGPGLTGATRASTEERVCIF
CCCHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEE
CHTPHHATSITPLWSRELSSALYTPYDSSTLKAIQKPGQPTGASRLCLGCHDGTIAPGML
EECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC
SGGKMIAGLPTLPTNVRSNLSTDLSDDHPISFPYAGSISVAAVLRLPAELPPEISLEDGR
CCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCCEECCCE
IECTSCHDPHKDRYPPADHPQKSGKFLVLDNNNYSALCTACHSRAGLTEGAHYLPGDPCE
EEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHH
SCHQVHRADQPARLLKGANVQETCVLTCHNGTGTVETSGTDIRSASVFGKAHQTGRLVLS
HHHHHHCCCCCHHHHCCCCCCEEEEEEEECCCCEEEECCCCCCHHHHHCCCCCCCEEEEE
GRHDADENPLDFEPSQPHVECVDCHNPCITRHESTPLASPPTLNGRLVGVTIAKSPDGIK
CCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCEEEEEEEECCCCCCE
TYADSEYAICYKCHGDRSFVPPAVPRRVQTGDQSLRFAQENPSYHPVSAPGKGMSVPSLR
EECCCCEEEEEEECCCCCCCCCCCCCHHCCCCHHEEEHHCCCCCCCCCCCCCCCCCCCEE
FEIVGFRPARTLSISSLIYCTDCHSSNKGSKVGGSGASGPHGSDYQPILMDRYEHDTYPL
EEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEE
AYAESNYSLCFRCHDQTILLDPGRSAFPLHQSHLVNHQVPCSVCHDPHGVPLVLGGTTAA
EEECCCCEEEEEECCCEEEECCCCCCCCCHHHHHCCCCCCHHCCCCCCCCEEEEECCCCC
NSHLINFDTRFVTTGSYDSPGRSCTVSCHSANPRTY
CCEEEEECEEEEEECCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA