Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39998314

Identifier: 39998314

GI number: 39998314

Start: 3535172

End: 3537139

Strand: Direct

Name: 39998314

Synonym: GSU3224

Alternate gene names: NA

Gene position: 3535172-3537139 (Clockwise)

Preceding gene: 39998313

Following gene: 39998315

Centisome position: 92.69

GC content: 59.96

Gene sequence:

>1968_bases
ATGGTGCTGCTCGTGCTGTCCTTCCCCTGCCCGGCCGACGCGGCACGGCTGACGCTGTTGCGCTTCGGCAAGCTGACCCA
GAACATCAGCCTGGGGTATGAATTCGATCAGCAGTCGAGCCAAAGCGACGGGGGAACCAGCCTTGACTCCACGTCCCACC
GCTTCGACGAGCGTTATCGGGCCGCGTTCCGCTATGCTGTCCTCTCTCCGCGATTGTTGAACGGTTCCGTCAGGGTCGGC
GCCAACCTCGAACAGGAAAACGAAGAAACCACCAACCGTTCCGCCTCCGACGGTTCGAGCCATCAATTGGAGTACAACGT
AAACGGCACCTGGTTCCAGCGCAGTTGGTATCCGGTCACCTTCTTTACCTATCAGCAGTACAACAGGGTGCGCCAGGCAT
TCACTCCCTCCTACGACATCAAGACCGACGGCGTCGGCGCGACCCTGAGCCTCCAGAACAACTACGTACCCACCCTGTTC
AACTACAGTCTCCGCTCGAACGCTACGTCGGGGGCAGGAGCCGACACGGAGAACACCATCGAAGCCTTTCTTCTGTCGTT
CTCCCACAACTACCGGAGCCTGTCCAACGCAACGCTGTCGCTGTCCCTCAACAAGAGTGACACCGTCACCAAGGGAGAGG
CAACGACAACCTCTTCGGACACGCGCAGCGTCGTGTTCAAGCATCTGCTCAATCTGGGGACCACCGATCTCACCCGCACC
CTCAACACCCTCGCCAGCTACGTCGACGAGACCGGCACGGTCCGGAATCACACCCTGGAGTTGAACGAAAGTCTCGACTG
GTGGGTGGGCAAGGCGCTCCAAACCCACGCAATCTACATTCACCGCGACCGCACCTTTGCCGACAGAAAAACGGTGGAGG
ACAGCGGGGTCGGCTGGATTCAGCATCGCCTCTATAAGAGCCTCACTACCCGCCTCGACCTGCGGGGCAAGAACACCACC
TTCGACAACAACGGCTCCATCACCGAGATCGGTGGCGGAGGAACCATCGACTATGAAAAAAAGCTGCCCGAAGAGAGCAG
CCTGCTGGTGGGGGTGGGCTACAATTACGGGATCACCGACAACAAACTGGGCGCCGATGCCCTGCCGGTAATCAATGAAC
AGACCACGGTGCCGGACCTTCCCCCCTACGAACTTGTGATGGGACAATTGGACGTTAACCCCGACAGCATCGTCGTCCGC
AACCGGGAACGGACGTTCATCTACACCCCCGGCACCGATTACCAGGTTGTGACCGATGGCCGCGAGACCCGGATCGTCTT
TCCGCAGATCCCCACGGTCGGCCCGTTTCCGATCACCGCGGGAAGCATCCTCTCCATCGATTACGAATACCGGATTGCCC
CCTCCATCACCTATAGCCAGAGCGTCTATACCGGCTACGCTACCCTGTCGCTCTTTCAGGAGCGGCACCGCTTGTTCGTG
CGAATCACCGACAGCAGCCAGGACGTCCTGGAAAACCGCGGGGCCGGGTCCCCTCAGCTCAGCGACTACCGGACTCTCAA
CCTGGGGTTTGAAAGCCGTCGGGAGTTCCTGAGTTACGGTGCTTCGTACCTCCGCATCGATTCGGACATCAACCCGAGCC
AGACCTTCGAGGGCTACTCGCGCTACGTGCGCTCCTTCGGCCGGGACCTGGTGCGACTGAACCTTCGGGAGCGCTATACC
CTTCATGACAACGGGGATGACCGCACGGAGTCCAGCTACACCAATACCCTCAACCTGACGGGGGAATACCTCCGTCCGGT
CACCAACTGGGCGACCATGCGCCTGATCGGGGACTACCTGATGGTGCGGGGACGTTCTCCCAGCGATGAAGTGAGTGCTT
CGGTCGAGCTCAATGCCCAGTTCGGACGAACCGAACTGTCCCTCTTCTCGGAGCTGGCCTGGAAGTTTTTGCCCCAGAAC
ACGAACCGCAGCACTGCCATCAGGCTGCAGATCAGCAGGTCGTTCTAA

Upstream 100 bases:

>100_bases
CGACGCCCGCTATCTGCTGCGCTAGGCACCGGCCATGGAACTATGGGGAAATGCAGCGAGGGGCCCGATAGGCGGTGGCA
TACGCATTGCCGCCGCGCTC

Downstream 100 bases:

>100_bases
CCGAGCGGACGAAAAGGAGCACACATGGAGCAATCAGTCCCGGCACGCGGCACATCCCCTGCACGCCGGCTTGCGACCGC
GGCCAGGCACTGCCTGGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 655; Mature: 655

Protein sequence:

>655_residues
MVLLVLSFPCPADAARLTLLRFGKLTQNISLGYEFDQQSSQSDGGTSLDSTSHRFDERYRAAFRYAVLSPRLLNGSVRVG
ANLEQENEETTNRSASDGSSHQLEYNVNGTWFQRSWYPVTFFTYQQYNRVRQAFTPSYDIKTDGVGATLSLQNNYVPTLF
NYSLRSNATSGAGADTENTIEAFLLSFSHNYRSLSNATLSLSLNKSDTVTKGEATTTSSDTRSVVFKHLLNLGTTDLTRT
LNTLASYVDETGTVRNHTLELNESLDWWVGKALQTHAIYIHRDRTFADRKTVEDSGVGWIQHRLYKSLTTRLDLRGKNTT
FDNNGSITEIGGGGTIDYEKKLPEESSLLVGVGYNYGITDNKLGADALPVINEQTTVPDLPPYELVMGQLDVNPDSIVVR
NRERTFIYTPGTDYQVVTDGRETRIVFPQIPTVGPFPITAGSILSIDYEYRIAPSITYSQSVYTGYATLSLFQERHRLFV
RITDSSQDVLENRGAGSPQLSDYRTLNLGFESRREFLSYGASYLRIDSDINPSQTFEGYSRYVRSFGRDLVRLNLRERYT
LHDNGDDRTESSYTNTLNLTGEYLRPVTNWATMRLIGDYLMVRGRSPSDEVSASVELNAQFGRTELSLFSELAWKFLPQN
TNRSTAIRLQISRSF

Sequences:

>Translated_655_residues
MVLLVLSFPCPADAARLTLLRFGKLTQNISLGYEFDQQSSQSDGGTSLDSTSHRFDERYRAAFRYAVLSPRLLNGSVRVG
ANLEQENEETTNRSASDGSSHQLEYNVNGTWFQRSWYPVTFFTYQQYNRVRQAFTPSYDIKTDGVGATLSLQNNYVPTLF
NYSLRSNATSGAGADTENTIEAFLLSFSHNYRSLSNATLSLSLNKSDTVTKGEATTTSSDTRSVVFKHLLNLGTTDLTRT
LNTLASYVDETGTVRNHTLELNESLDWWVGKALQTHAIYIHRDRTFADRKTVEDSGVGWIQHRLYKSLTTRLDLRGKNTT
FDNNGSITEIGGGGTIDYEKKLPEESSLLVGVGYNYGITDNKLGADALPVINEQTTVPDLPPYELVMGQLDVNPDSIVVR
NRERTFIYTPGTDYQVVTDGRETRIVFPQIPTVGPFPITAGSILSIDYEYRIAPSITYSQSVYTGYATLSLFQERHRLFV
RITDSSQDVLENRGAGSPQLSDYRTLNLGFESRREFLSYGASYLRIDSDINPSQTFEGYSRYVRSFGRDLVRLNLRERYT
LHDNGDDRTESSYTNTLNLTGEYLRPVTNWATMRLIGDYLMVRGRSPSDEVSASVELNAQFGRTELSLFSELAWKFLPQN
TNRSTAIRLQISRSF
>Mature_655_residues
MVLLVLSFPCPADAARLTLLRFGKLTQNISLGYEFDQQSSQSDGGTSLDSTSHRFDERYRAAFRYAVLSPRLLNGSVRVG
ANLEQENEETTNRSASDGSSHQLEYNVNGTWFQRSWYPVTFFTYQQYNRVRQAFTPSYDIKTDGVGATLSLQNNYVPTLF
NYSLRSNATSGAGADTENTIEAFLLSFSHNYRSLSNATLSLSLNKSDTVTKGEATTTSSDTRSVVFKHLLNLGTTDLTRT
LNTLASYVDETGTVRNHTLELNESLDWWVGKALQTHAIYIHRDRTFADRKTVEDSGVGWIQHRLYKSLTTRLDLRGKNTT
FDNNGSITEIGGGGTIDYEKKLPEESSLLVGVGYNYGITDNKLGADALPVINEQTTVPDLPPYELVMGQLDVNPDSIVVR
NRERTFIYTPGTDYQVVTDGRETRIVFPQIPTVGPFPITAGSILSIDYEYRIAPSITYSQSVYTGYATLSLFQERHRLFV
RITDSSQDVLENRGAGSPQLSDYRTLNLGFESRREFLSYGASYLRIDSDINPSQTFEGYSRYVRSFGRDLVRLNLRERYT
LHDNGDDRTESSYTNTLNLTGEYLRPVTNWATMRLIGDYLMVRGRSPSDEVSASVELNAQFGRTELSLFSELAWKFLPQN
TNRSTAIRLQISRSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73778; Mature: 73778

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLVLSFPCPADAARLTLLRFGKLTQNISLGYEFDQQSSQSDGGTSLDSTSHRFDERYR
CEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHH
AAFRYAVLSPRLLNGSVRVGANLEQENEETTNRSASDGSSHQLEYNVNGTWFQRSWYPVT
HHHHHHHCCCEEECCCEEECCCCCCCCHHHCCCCCCCCCCCEEEEECCCEEEEEEEEEEE
FFTYQQYNRVRQAFTPSYDIKTDGVGATLSLQNNYVPTLFNYSLRSNATSGAGADTENTI
EEEHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCCEEEEHHHCCCCCCCCCCCHHHH
EAFLLSFSHNYRSLSNATLSLSLNKSDTVTKGEATTTSSDTRSVVFKHLLNLGTTDLTRT
HHHHHHHCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
LNTLASYVDETGTVRNHTLELNESLDWWVGKALQTHAIYIHRDRTFADRKTVEDSGVGWI
HHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCHHH
QHRLYKSLTTRLDLRGKNTTFDNNGSITEIGGGGTIDYEKKLPEESSLLVGVGYNYGITD
HHHHHHHHHHEEEECCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCEEEEECCCCCCCC
NKLGADALPVINEQTTVPDLPPYELVMGQLDVNPDSIVVRNRERTFIYTPGTDYQVVTDG
CCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCEEEEECCCEEEEECCCCCEEEEECC
RETRIVFPQIPTVGPFPITAGSILSIDYEYRIAPSITYSQSVYTGYATLSLFQERHRLFV
CCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCEEECCCHHHHHHHHHHHHHCCEEEE
RITDSSQDVLENRGAGSPQLSDYRTLNLGFESRREFLSYGASYLRIDSDINPSQTFEGYS
EEECCCHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
RYVRSFGRDLVRLNLRERYTLHDNGDDRTESSYTNTLNLTGEYLRPVTNWATMRLIGDYL
HHHHHHCHHEEEEEHHHEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
MVRGRSPSDEVSASVELNAQFGRTELSLFSELAWKFLPQNTNRSTAIRLQISRSF
EEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MVLLVLSFPCPADAARLTLLRFGKLTQNISLGYEFDQQSSQSDGGTSLDSTSHRFDERYR
CEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHH
AAFRYAVLSPRLLNGSVRVGANLEQENEETTNRSASDGSSHQLEYNVNGTWFQRSWYPVT
HHHHHHHCCCEEECCCEEECCCCCCCCHHHCCCCCCCCCCCEEEEECCCEEEEEEEEEEE
FFTYQQYNRVRQAFTPSYDIKTDGVGATLSLQNNYVPTLFNYSLRSNATSGAGADTENTI
EEEHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCCEEEEHHHCCCCCCCCCCCHHHH
EAFLLSFSHNYRSLSNATLSLSLNKSDTVTKGEATTTSSDTRSVVFKHLLNLGTTDLTRT
HHHHHHHCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
LNTLASYVDETGTVRNHTLELNESLDWWVGKALQTHAIYIHRDRTFADRKTVEDSGVGWI
HHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCHHH
QHRLYKSLTTRLDLRGKNTTFDNNGSITEIGGGGTIDYEKKLPEESSLLVGVGYNYGITD
HHHHHHHHHHEEEECCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCEEEEECCCCCCCC
NKLGADALPVINEQTTVPDLPPYELVMGQLDVNPDSIVVRNRERTFIYTPGTDYQVVTDG
CCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCEEEEECCCEEEEECCCCCEEEEECC
RETRIVFPQIPTVGPFPITAGSILSIDYEYRIAPSITYSQSVYTGYATLSLFQERHRLFV
CCEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCEEECCCHHHHHHHHHHHHHCCEEEE
RITDSSQDVLENRGAGSPQLSDYRTLNLGFESRREFLSYGASYLRIDSDINPSQTFEGYS
EEECCCHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
RYVRSFGRDLVRLNLRERYTLHDNGDDRTESSYTNTLNLTGEYLRPVTNWATMRLIGDYL
HHHHHHCHHEEEEEHHHEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH
MVRGRSPSDEVSASVELNAQFGRTELSLFSELAWKFLPQNTNRSTAIRLQISRSF
EEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA