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The map label for this gene is 39998229

Identifier: 39998229

GI number: 39998229

Start: 3446013

End: 3446861

Strand: Reverse

Name: 39998229

Synonym: GSU3139

Alternate gene names: NA

Gene position: 3446861-3446013 (Counterclockwise)

Preceding gene: 39998230

Following gene: 39998226

Centisome position: 90.37

GC content: 60.31

Gene sequence:

>849_bases
ATGAAGCGATTGGGAACATTCGCCGGCATTGCGCTGGTGCTGGCCCTCACTGCGGTGGTGGCACGTACCTGCTTCAGTCA
TGATCTGATCGTGCGGATCAAGGATCGCAAGGAGATCAGCTTCGAGGAGATGCTGCGGGATCTAAAGGCGGGCAAGGTGA
TCTATGTGGGGGAGACTCACGACAATCCCTATCACCATGACCTTCAGCTCAGGATTGTCCGTGAGCTCCATCGGGCCGGC
GTGCCGCTGGCCATTGCCATGGAGATGTTCACGTACGAAAGCCAGGAGGAGCTGGACCGCTGGGTGGCAGGGAAAACCGA
TCCGGCGTTGTTTCAACAGATCTACCTGAAAAACTGGAACTTCCCCTGGGCCCTGTACGGCGACATCCTGCTGTTTGCCC
GGGACAGGCGCATCCCCCTCGTTGGCCTCAATGTCCCCCGGGAGGTAACCCGCAAGGTTGCCCGCCAGGGGTTCGAGTCC
CTGTCGCGCGAGGAGCGCCGCAAGCTCCCCCCCAGTATCACCTGTGACGTGGATGATGCGTACATGGCCATGATCCGGCG
TTCCTACTCGGATCACGATACCAGCGCCAAGACTTTCAAGAACTTCTGCGAGGCCCAGATGCTCTGGAACAAGTCAATGG
CCTATCACCTGGTCGAGTATCTGAAAAACAATCCCGGCCGGACCGTTGTGGTCATCACCGGCAGCGGGCATGCTGTGCGG
GGGGGGATGCCGGTCCAGGTCGACCGGGAAAAGCCCGGTCTCGCCAGCAGGGTGGTTCTTCCCGATCCGGTGGTTCAGAA
CGGGGCGATCTCCGTGGAGGACGCCGACTACCTCTGGCTGTCACACTGA

Upstream 100 bases:

>100_bases
CGGGTGAAGGAAACTCCCCCGGCGCTCAGCGAAACCAGCGTGGTAACGTTTGACCGGCAGGTTGACAGATAGGATGACGC
GACGTCATTCGGGAGGAAGC

Downstream 100 bases:

>100_bases
CGCCGGTTCACGTCATGGCCGGCAGGGAGATGAAGAAGGTGCTTCCTTTGCCCGGCGAGCTCTCCACCCAGCTCCGGCCG
CCGTGGGTGGCCACGATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Pdz/Dhr/Glgf; Lipoprotein; PDZ Domain-Containing Protein; Peptidase M1 Membrane Alanine Aminopeptidase; PDZ/DHR/GLGF Domain Protein; PDZ/DHR/GLGF Domain-Containing Protein

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKRLGTFAGIALVLALTAVVARTCFSHDLIVRIKDRKEISFEEMLRDLKAGKVIYVGETHDNPYHHDLQLRIVRELHRAG
VPLAIAMEMFTYESQEELDRWVAGKTDPALFQQIYLKNWNFPWALYGDILLFARDRRIPLVGLNVPREVTRKVARQGFES
LSREERRKLPPSITCDVDDAYMAMIRRSYSDHDTSAKTFKNFCEAQMLWNKSMAYHLVEYLKNNPGRTVVVITGSGHAVR
GGMPVQVDREKPGLASRVVLPDPVVQNGAISVEDADYLWLSH

Sequences:

>Translated_282_residues
MKRLGTFAGIALVLALTAVVARTCFSHDLIVRIKDRKEISFEEMLRDLKAGKVIYVGETHDNPYHHDLQLRIVRELHRAG
VPLAIAMEMFTYESQEELDRWVAGKTDPALFQQIYLKNWNFPWALYGDILLFARDRRIPLVGLNVPREVTRKVARQGFES
LSREERRKLPPSITCDVDDAYMAMIRRSYSDHDTSAKTFKNFCEAQMLWNKSMAYHLVEYLKNNPGRTVVVITGSGHAVR
GGMPVQVDREKPGLASRVVLPDPVVQNGAISVEDADYLWLSH
>Mature_282_residues
MKRLGTFAGIALVLALTAVVARTCFSHDLIVRIKDRKEISFEEMLRDLKAGKVIYVGETHDNPYHHDLQLRIVRELHRAG
VPLAIAMEMFTYESQEELDRWVAGKTDPALFQQIYLKNWNFPWALYGDILLFARDRRIPLVGLNVPREVTRKVARQGFES
LSREERRKLPPSITCDVDDAYMAMIRRSYSDHDTSAKTFKNFCEAQMLWNKSMAYHLVEYLKNNPGRTVVVITGSGHAVR
GGMPVQVDREKPGLASRVVLPDPVVQNGAISVEDADYLWLSH

Specific function: Unknown

COG id: COG3016

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32212; Mature: 32212

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLGTFAGIALVLALTAVVARTCFSHDLIVRIKDRKEISFEEMLRDLKAGKVIYVGETH
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEECCC
DNPYHHDLQLRIVRELHRAGVPLAIAMEMFTYESQEELDRWVAGKTDPALFQQIYLKNWN
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCC
FPWALYGDILLFARDRRIPLVGLNVPREVTRKVARQGFESLSREERRKLPPSITCDVDDA
CCHHHHHCEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHH
YMAMIRRSYSDHDTSAKTFKNFCEAQMLWNKSMAYHLVEYLKNNPGRTVVVITGSGHAVR
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE
GGMPVQVDREKPGLASRVVLPDPVVQNGAISVEDADYLWLSH
CCCCEEECCCCCCCCCEEECCCCCCCCCEEEECCCCEEEECC
>Mature Secondary Structure
MKRLGTFAGIALVLALTAVVARTCFSHDLIVRIKDRKEISFEEMLRDLKAGKVIYVGETH
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEECCC
DNPYHHDLQLRIVRELHRAGVPLAIAMEMFTYESQEELDRWVAGKTDPALFQQIYLKNWN
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCC
FPWALYGDILLFARDRRIPLVGLNVPREVTRKVARQGFESLSREERRKLPPSITCDVDDA
CCHHHHHCEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHH
YMAMIRRSYSDHDTSAKTFKNFCEAQMLWNKSMAYHLVEYLKNNPGRTVVVITGSGHAVR
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE
GGMPVQVDREKPGLASRVVLPDPVVQNGAISVEDADYLWLSH
CCCCEEECCCCCCCCCEEECCCCCCCCCEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA