| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is flgK [H]
Identifier: 39998134
GI number: 39998134
Start: 3347451
End: 3348884
Strand: Reverse
Name: flgK [H]
Synonym: GSU3043
Alternate gene names: 39998134
Gene position: 3348884-3347451 (Counterclockwise)
Preceding gene: 39998135
Following gene: 39998133
Centisome position: 87.8
GC content: 61.3
Gene sequence:
>1434_bases ATGAGTATCCTGAGCCTCCTCGACATAGCCAAATCGGGCATCACCGCGCAGCGTCTCGCTCTTGAGGTCACCAGCGAGAA TATCACCAACGTGAACACGCCCGGCTATTCAAAGCAGACCACCGTCTTCACCACCGCCACCGTTTCACAGGAGCGAGGGT TCCCCCTCGGCAACGGGGTAAGGGTCGCGGAAATCCAGCGGGCCTATGACGATTTCCTCCAGATGCAGCTCAAGTCCGAA AACACCACCAAGGGGTGGAGCGACACGGTGCTTGCCTCCATGACGCGGGCCGAGCAGCTCTTCAACGAGTTTACCACCGA TGGCCTGGGCAAGTCGCTGCAGGATTTTTTCAGTGCCTGGCAGGATCTGACCGCCAACCCCCAAGGCCAGCCCGAGCGGC AGGCGATCCTGGCGCGGGGACAGCAGCTTGCGGACCAGTTCAAGCGGGTCAACAGCTACCTCAATGACATCAGGACCGAG GCAAACCAGTCCCTGGAGGGGGTTACCGCCGACGTCAACGACAAGCTGCGGAAGATTGCCTCCCTCAACGAGCAGATCAA GCAGATCGAGGTTCAGGGCGCCCGGGCCAATGAGCTGCGCGATCAGCGCGATCTGGCCGTGCGCCAGCTCGCCGAAAAGG TCGGCATCACGTACATGGAGCAGACCGACGGCACCCTTAACGTGAGCCTCTCCCTCGGCCAGCCGCTGGTTCTGGGTAAG GATGCGGCAGTCCTTTCGCTGCAGCCCGATGCGGCCAATTCGGGCTTTTACAGGATCTACTCCACCGCCCCAGGCGGCAA GACTGCCGTGGACATCAGCTCCATCGTGGGAGGGCCGGGGAACGGCCAGGGTGAAATGGGGGGGACGCTCCAGGTCCGTG ATTCTCTGGTGAACGGCTTTCTGGCCGACCTCGACGAGTTGGCCTATACGCTGGCAACCGAGGTGAACGCAGTGCACTCC AGCGGCTTCGGCCTCACCGGCTCCACTGGCCTCGACTTCTTCTCCACGCCGGCGACCATGGCGGGATACAGCGGGCTGGG CGGGATATCCGTCGCCATCTCCAATAGCAACGACATTGCCGCCGCCAATGCCGACCCCTCAGTGGGGGGGACCGGCAACA ACACCAATGCCAAGGATATCGCCTCCCTGTTCGACAAGATCCTGCCCCTGTCGGGCGGAAATATGACCCTCGGCGGTTTC TACAACTCCCTGGTGGGGAAGGTGGGCGTATCGGTCCAGAATGCAGAGCGGAGCGCAACGCTGTCCGAGGGCGTTCTGAA GCAGTTGGACAATCTGCGTGAATCCCAATCGGGGGTCTCTCTGGATGAGGAGCTGGCAAACCTCATCAAGTATCAGAAGG CCTTTGAGGGGGCCGCGAAACTCATCAATACGGGAACCGAGATGATGGATGTCATCCTCGGGCTCGTTCGATAG
Upstream 100 bases:
>100_bases GCATTTTTCCAGAGCCGGTTGACGGTTGCCGAGACGTATGGCAATTCCGGCTCCATGGTGGAACGTTCCTCCGGCGGCAT CCTCCGGAAGGAGATCTGAC
Downstream 100 bases:
>100_bases GAAGGTGCCATGAGAGTTACTCAAAACACCACGGCAAACCTGGTTCTCAACAGCCTTCAGACGATCAGGCGGAGGACCGA AGAGCTGGAGCAGCAGGCTG
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MSILSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFPLGNGVRVAEIQRAYDDFLQMQLKSE NTTKGWSDTVLASMTRAEQLFNEFTTDGLGKSLQDFFSAWQDLTANPQGQPERQAILARGQQLADQFKRVNSYLNDIRTE ANQSLEGVTADVNDKLRKIASLNEQIKQIEVQGARANELRDQRDLAVRQLAEKVGITYMEQTDGTLNVSLSLGQPLVLGK DAAVLSLQPDAANSGFYRIYSTAPGGKTAVDISSIVGGPGNGQGEMGGTLQVRDSLVNGFLADLDELAYTLATEVNAVHS SGFGLTGSTGLDFFSTPATMAGYSGLGGISVAISNSNDIAAANADPSVGGTGNNTNAKDIASLFDKILPLSGGNMTLGGF YNSLVGKVGVSVQNAERSATLSEGVLKQLDNLRESQSGVSLDEELANLIKYQKAFEGAAKLINTGTEMMDVILGLVR
Sequences:
>Translated_477_residues MSILSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFPLGNGVRVAEIQRAYDDFLQMQLKSE NTTKGWSDTVLASMTRAEQLFNEFTTDGLGKSLQDFFSAWQDLTANPQGQPERQAILARGQQLADQFKRVNSYLNDIRTE ANQSLEGVTADVNDKLRKIASLNEQIKQIEVQGARANELRDQRDLAVRQLAEKVGITYMEQTDGTLNVSLSLGQPLVLGK DAAVLSLQPDAANSGFYRIYSTAPGGKTAVDISSIVGGPGNGQGEMGGTLQVRDSLVNGFLADLDELAYTLATEVNAVHS SGFGLTGSTGLDFFSTPATMAGYSGLGGISVAISNSNDIAAANADPSVGGTGNNTNAKDIASLFDKILPLSGGNMTLGGF YNSLVGKVGVSVQNAERSATLSEGVLKQLDNLRESQSGVSLDEELANLIKYQKAFEGAAKLINTGTEMMDVILGLVR >Mature_476_residues SILSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFPLGNGVRVAEIQRAYDDFLQMQLKSEN TTKGWSDTVLASMTRAEQLFNEFTTDGLGKSLQDFFSAWQDLTANPQGQPERQAILARGQQLADQFKRVNSYLNDIRTEA NQSLEGVTADVNDKLRKIASLNEQIKQIEVQGARANELRDQRDLAVRQLAEKVGITYMEQTDGTLNVSLSLGQPLVLGKD AAVLSLQPDAANSGFYRIYSTAPGGKTAVDISSIVGGPGNGQGEMGGTLQVRDSLVNGFLADLDELAYTLATEVNAVHSS GFGLTGSTGLDFFSTPATMAGYSGLGGISVAISNSNDIAAANADPSVGGTGNNTNAKDIASLFDKILPLSGGNMTLGGFY NSLVGKVGVSVQNAERSATLSEGVLKQLDNLRESQSGVSLDEELANLIKYQKAFEGAAKLINTGTEMMDVILGLVR
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=359, Percent_Identity=31.1977715877437, Blast_Score=157, Evalue=1e-39,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 50660; Mature: 50529
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFPLGNGV CHHHHHHHHHHCCCCHHHHEEEECCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCC RVAEIQRAYDDFLQMQLKSENTTKGWSDTVLASMTRAEQLFNEFTTDGLGKSLQDFFSAW HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDLTANPQGQPERQAILARGQQLADQFKRVNSYLNDIRTEANQSLEGVTADVNDKLRKIA HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH SLNEQIKQIEVQGARANELRDQRDLAVRQLAEKVGITYMEQTDGTLNVSLSLGQPLVLGK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCEEECC DAAVLSLQPDAANSGFYRIYSTAPGGKTAVDISSIVGGPGNGQGEMGGTLQVRDSLVNGF CCEEEEECCCCCCCCEEEEEEECCCCCCEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHH LADLDELAYTLATEVNAVHSSGFGLTGSTGLDFFSTPATMAGYSGLGGISVAISNSNDIA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCEE AANADPSVGGTGNNTNAKDIASLFDKILPLSGGNMTLGGFYNSLVGKVGVSVQNAERSAT ECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCEECCHHHHH LSEGVLKQLDNLRESQSGVSLDEELANLIKYQKAFEGAAKLINTGTEMMDVILGLVR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SILSLLDIAKSGITAQRLALEVTSENITNVNTPGYSKQTTVFTTATVSQERGFPLGNGV HHHHHHHHHHCCCCHHHHEEEECCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCC RVAEIQRAYDDFLQMQLKSENTTKGWSDTVLASMTRAEQLFNEFTTDGLGKSLQDFFSAW HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDLTANPQGQPERQAILARGQQLADQFKRVNSYLNDIRTEANQSLEGVTADVNDKLRKIA HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH SLNEQIKQIEVQGARANELRDQRDLAVRQLAEKVGITYMEQTDGTLNVSLSLGQPLVLGK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCEEECC DAAVLSLQPDAANSGFYRIYSTAPGGKTAVDISSIVGGPGNGQGEMGGTLQVRDSLVNGF CCEEEEECCCCCCCCEEEEEEECCCCCCEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHH LADLDELAYTLATEVNAVHSSGFGLTGSTGLDFFSTPATMAGYSGLGGISVAISNSNDIA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCEE AANADPSVGGTGNNTNAKDIASLFDKILPLSGGNMTLGGFYNSLVGKVGVSVQNAERSAT ECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCEECCHHHHH LSEGVLKQLDNLRESQSGVSLDEELANLIKYQKAFEGAAKLINTGTEMMDVILGLVR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 8045879 [H]