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The map label for this gene is 39998093

Identifier: 39998093

GI number: 39998093

Start: 3294515

End: 3295270

Strand: Reverse

Name: 39998093

Synonym: GSU3002

Alternate gene names: NA

Gene position: 3295270-3294515 (Counterclockwise)

Preceding gene: 39998094

Following gene: 39998092

Centisome position: 86.4

GC content: 67.86

Gene sequence:

>756_bases
ATGAAGCACGTCCTCAGCGCGTCTCCGGCCGATCATCCCCTGTCGCGGCTCGACCCGCGGGTCAAGCTCCTGACGGCCGG
GGCACTGCTCGCCATGGTCATCAGCTGCACCGGCGGGCTGTTCCCGCTGCTGGCGGCGATCCTCTCCCTGGGGATCGTCG
TCTCGTTGGGGGTGCCGCTCCGCCTGATCCTGCTCCGCTTTGCGGAACCGGCGTTCATCGCCGCCGTGGTCCTCCTGCTC
AAGCTTTTCTTCAGCGGCGTCACGCCGCTTTTCACACTCCAGCTGCCCTGGCTGGAGCTTACCGCATACCGGGAGGGACT
GCGGGAAGGGCTCCTCATCGCCGGCCGCATTGCCGCCGCCGTGTCGGTTGTATCGGCGGTCGGCTTCTCCTCCTCGTTCA
CCGACCTGATGGCGGCCCTGGCATGGCTGCGGGTGCCGCGCAGCTTCATCGAGGTGGCGCTGTTCGCCTGGCGCTACCTG
TTCCTGCTCCTGGACGACGCCCAGGTGATCCACGCGGCCCAGCGGAATCGCCTGGGCTACAGCGGGCTGCGCCGGGGGAT
GCGCTCCTTCGGCACCTTGGCCGGCGCCCTGGTTCTTAAGGCCTTCGACAACAGCCAGACCATTACCACCGCCATGGTTC
AGAGGGGGTACGACGGGAACCTGCCGCTGTTCAGGCACCGTCCGTTCCGGCCGGCCGAGGTGGCTCTGTCCGCCCTCTTC
GTGGTGGCCATGGGAACCCTCTGGGGGATGCAGTGA

Upstream 100 bases:

>100_bases
CTCCCTCCTGGACCCTCAAGGTGTTTCAGACGTTGAACAATGATGACCGCGATCATGCCAACCGGCTTCGCGACTACATG
GCGGCGAAGGGAATTGCCGA

Downstream 100 bases:

>100_bases
GGTTTTCCGTGGACCTGAAGGCCTATGCCTATCCCGACGGTACCGTGGCCCTGTCGGATATCCGTTTCCAGGTGGCGCGG
GGAGAATTTTGCGGCATCCT

Product: cobalt ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKHVLSASPADHPLSRLDPRVKLLTAGALLAMVISCTGGLFPLLAAILSLGIVVSLGVPLRLILLRFAEPAFIAAVVLLL
KLFFSGVTPLFTLQLPWLELTAYREGLREGLLIAGRIAAAVSVVSAVGFSSSFTDLMAALAWLRVPRSFIEVALFAWRYL
FLLLDDAQVIHAAQRNRLGYSGLRRGMRSFGTLAGALVLKAFDNSQTITTAMVQRGYDGNLPLFRHRPFRPAEVALSALF
VVAMGTLWGMQ

Sequences:

>Translated_251_residues
MKHVLSASPADHPLSRLDPRVKLLTAGALLAMVISCTGGLFPLLAAILSLGIVVSLGVPLRLILLRFAEPAFIAAVVLLL
KLFFSGVTPLFTLQLPWLELTAYREGLREGLLIAGRIAAAVSVVSAVGFSSSFTDLMAALAWLRVPRSFIEVALFAWRYL
FLLLDDAQVIHAAQRNRLGYSGLRRGMRSFGTLAGALVLKAFDNSQTITTAMVQRGYDGNLPLFRHRPFRPAEVALSALF
VVAMGTLWGMQ
>Mature_251_residues
MKHVLSASPADHPLSRLDPRVKLLTAGALLAMVISCTGGLFPLLAAILSLGIVVSLGVPLRLILLRFAEPAFIAAVVLLL
KLFFSGVTPLFTLQLPWLELTAYREGLREGLLIAGRIAAAVSVVSAVGFSSSFTDLMAALAWLRVPRSFIEVALFAWRYL
FLLLDDAQVIHAAQRNRLGYSGLRRGMRSFGTLAGALVLKAFDNSQTITTAMVQRGYDGNLPLFRHRPFRPAEVALSALF
VVAMGTLWGMQ

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339
- InterPro:   IPR012809 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 27232; Mature: 27232

Theoretical pI: Translated: 11.32; Mature: 11.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]