Click here to switch to the map view.

The map label for this gene is 39998079

Identifier: 39998079

GI number: 39998079

Start: 3279233

End: 3280603

Strand: Direct

Name: 39998079

Synonym: GSU2988

Alternate gene names: NA

Gene position: 3279233-3280603 (Clockwise)

Preceding gene: 39998067

Following gene: 39998103

Centisome position: 85.98

GC content: 66.3

Gene sequence:

>1371_bases
ATGAGAACTGGCTACCATCGCACAACAACCCCGGACGAACAGGAGCTTGAACGCAAGCGACGGGAGTTCCACGCCCTGGA
GCGCCGCCTCTCCAGGCTGGAGCACGACCTGGAGGATCTGCGGGAAGAGATTCGGGAGTTCGAGCAGCTCTACGCCGACA
AAATGGCCGACCGGATCAGCGAGTTGGACCAGTTGAAGGCCGAACTGGCGCGGGCACGCCGACAGGCGGCCATGGCCGAT
GGGGAAGAGCGTACGGCTGAGGGCGAGCGGGACGGGTTCAGCGAGGAGCGCCGGTTCGAGGAGCGCGGCGGGGAGACGGA
AACGGAAATCCCCCGGGTGAAACCCGCCACGATGAATTCGGGGACCGGCGAAAGCCTGCGGGATGTGTACCGGCGGGTCG
CCAAGGCGATCCATCCCGACCTGGCCGAAAACGACGAAAACCGGCGGCTGCGGCAGAAGCTCATGGCCGAGGCGAACAGG
GCCTACGCCGAGGAGGACCGGGTGACGCTCCACGCCATTATGGAGGAGTGGGAAGCGGGACCCGAGATGACTGTGGTCGT
GGGGATGGCCGGCCAGCTGGAGCTGGTGAACCGGCGGATCGCTCGGGTGATCGACCGGATCAGATCAGTGGAGCGTGAAA
CGGCAAAACTGCGCAACAGCGACATCTACCGGCTGGTCCAGCGGGTGCAGGAGGCTCGCTGGCGCGGGCGGGACATAATC
GCCGAGATGGCGGCGAAACTGGATGCGGAAATCCTTGCCGCATGCCGGCATTTGAACGAGGTCAGCCAGGTCAGCCCCCG
GAGCGACGCACCTCCGGAGCCGATCAACACACCCCAGGCGTCCCTGCGCACCGTCCGCTTTCCGACCGAACGCAGCCTCG
GCGTGCTCTACGTGCGCGATCTGCGCTCAGGGAGCTTCCTGGACTGGAAGCGCCTCGGCGAGGCCATGGGCGATGTGGCG
GTCCCAACGGGCAAGGCCCTGCGCCTTGATGTACCGGAGGGAGACACCGGCAGTCTCGACCTGCTCGGCACCCTGGCTCC
CCATGACCTCCAGGCCTGCTTCCTCTACGGCGCCGGCGACGACGACCTCACCCACCTGCTGAAGCTCATCGGCATCGAGG
AAATCTACCTGTCCGGCGCCGGCATCTCCGGCGAAGGGTTGGCCCACCTGCTGGAGCTGAAAGGGCTCGAGCGCCTGTAC
CTCTACGATACGTCAGTCACCGACGCGGGGCTCATGGCCCTCAGACACCTCCCCCGCCTCCGCTCCGTCACCCTCTGCAA
TGCCCCGGTCACCGAACACGGCATCGACCGCCTAAAGCTCTCCCTTCCCGCCTGCCGGGTAGTGGTCCTCCGCAGCGGCG
GCAAAGCCTGA

Upstream 100 bases:

>100_bases
CTCTTCCTCTGGGAGCGTGAGCGCTACGGCTCCGGCCCCGCGTCTGAGCTTCCTGCCGACATCCAGCGGGCCCTGTTCAT
TCCCTGACCCCCGATACTTC

Downstream 100 bases:

>100_bases
CCTCCGCCACACTTCCTGTCCACCCCCGCTCACATGGTCCGGGCAAGGACCGCGGCACAAGCCGCCAGAAGACGCTCATT
GTCGGCGCGCGACCGGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MRTGYHRTTTPDEQELERKRREFHALERRLSRLEHDLEDLREEIREFEQLYADKMADRISELDQLKAELARARRQAAMAD
GEERTAEGERDGFSEERRFEERGGETETEIPRVKPATMNSGTGESLRDVYRRVAKAIHPDLAENDENRRLRQKLMAEANR
AYAEEDRVTLHAIMEEWEAGPEMTVVVGMAGQLELVNRRIARVIDRIRSVERETAKLRNSDIYRLVQRVQEARWRGRDII
AEMAAKLDAEILAACRHLNEVSQVSPRSDAPPEPINTPQASLRTVRFPTERSLGVLYVRDLRSGSFLDWKRLGEAMGDVA
VPTGKALRLDVPEGDTGSLDLLGTLAPHDLQACFLYGAGDDDLTHLLKLIGIEEIYLSGAGISGEGLAHLLELKGLERLY
LYDTSVTDAGLMALRHLPRLRSVTLCNAPVTEHGIDRLKLSLPACRVVVLRSGGKA

Sequences:

>Translated_456_residues
MRTGYHRTTTPDEQELERKRREFHALERRLSRLEHDLEDLREEIREFEQLYADKMADRISELDQLKAELARARRQAAMAD
GEERTAEGERDGFSEERRFEERGGETETEIPRVKPATMNSGTGESLRDVYRRVAKAIHPDLAENDENRRLRQKLMAEANR
AYAEEDRVTLHAIMEEWEAGPEMTVVVGMAGQLELVNRRIARVIDRIRSVERETAKLRNSDIYRLVQRVQEARWRGRDII
AEMAAKLDAEILAACRHLNEVSQVSPRSDAPPEPINTPQASLRTVRFPTERSLGVLYVRDLRSGSFLDWKRLGEAMGDVA
VPTGKALRLDVPEGDTGSLDLLGTLAPHDLQACFLYGAGDDDLTHLLKLIGIEEIYLSGAGISGEGLAHLLELKGLERLY
LYDTSVTDAGLMALRHLPRLRSVTLCNAPVTEHGIDRLKLSLPACRVVVLRSGGKA
>Mature_456_residues
MRTGYHRTTTPDEQELERKRREFHALERRLSRLEHDLEDLREEIREFEQLYADKMADRISELDQLKAELARARRQAAMAD
GEERTAEGERDGFSEERRFEERGGETETEIPRVKPATMNSGTGESLRDVYRRVAKAIHPDLAENDENRRLRQKLMAEANR
AYAEEDRVTLHAIMEEWEAGPEMTVVVGMAGQLELVNRRIARVIDRIRSVERETAKLRNSDIYRLVQRVQEARWRGRDII
AEMAAKLDAEILAACRHLNEVSQVSPRSDAPPEPINTPQASLRTVRFPTERSLGVLYVRDLRSGSFLDWKRLGEAMGDVA
VPTGKALRLDVPEGDTGSLDLLGTLAPHDLQACFLYGAGDDDLTHLLKLIGIEEIYLSGAGISGEGLAHLLELKGLERLY
LYDTSVTDAGLMALRHLPRLRSVTLCNAPVTEHGIDRLKLSLPACRVVVLRSGGKA

Specific function: Unknown

COG id: COG1076

COG function: function code O; DnaJ-domain-containing proteins 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51512; Mature: 51512

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGYHRTTTPDEQELERKRREFHALERRLSRLEHDLEDLREEIREFEQLYADKMADRIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDQLKAELARARRQAAMADGEERTAEGERDGFSEERRFEERGGETETEIPRVKPATMNS
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
GTGESLRDVYRRVAKAIHPDLAENDENRRLRQKLMAEANRAYAEEDRVTLHAIMEEWEAG
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEMTVVVGMAGQLELVNRRIARVIDRIRSVERETAKLRNSDIYRLVQRVQEARWRGRDII
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH
AEMAAKLDAEILAACRHLNEVSQVSPRSDAPPEPINTPQASLRTVRFPTERSLGVLYVRD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCEEEEEE
LRSGSFLDWKRLGEAMGDVAVPTGKALRLDVPEGDTGSLDLLGTLAPHDLQACFLYGAGD
CCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEHEECCCCCCCCEEEEECCCC
DDLTHLLKLIGIEEIYLSGAGISGEGLAHLLELKGLERLYLYDTSVTDAGLMALRHLPRL
HHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCHH
RSVTLCNAPVTEHGIDRLKLSLPACRVVVLRSGGKA
HCEEECCCCCHHHCHHHHHHHCCHHEEEEECCCCCC
>Mature Secondary Structure
MRTGYHRTTTPDEQELERKRREFHALERRLSRLEHDLEDLREEIREFEQLYADKMADRIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELDQLKAELARARRQAAMADGEERTAEGERDGFSEERRFEERGGETETEIPRVKPATMNS
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
GTGESLRDVYRRVAKAIHPDLAENDENRRLRQKLMAEANRAYAEEDRVTLHAIMEEWEAG
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEMTVVVGMAGQLELVNRRIARVIDRIRSVERETAKLRNSDIYRLVQRVQEARWRGRDII
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH
AEMAAKLDAEILAACRHLNEVSQVSPRSDAPPEPINTPQASLRTVRFPTERSLGVLYVRD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCEEEEEE
LRSGSFLDWKRLGEAMGDVAVPTGKALRLDVPEGDTGSLDLLGTLAPHDLQACFLYGAGD
CCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEHEECCCCCCCCEEEEECCCC
DDLTHLLKLIGIEEIYLSGAGISGEGLAHLLELKGLERLYLYDTSVTDAGLMALRHLPRL
HHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCHH
RSVTLCNAPVTEHGIDRLKLSLPACRVVVLRSGGKA
HCEEECCCCCHHHCHHHHHHHCCHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA