| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998074
Identifier: 39998074
GI number: 39998074
Start: 3275022
End: 3275558
Strand: Reverse
Name: 39998074
Synonym: GSU2983
Alternate gene names: NA
Gene position: 3275558-3275022 (Counterclockwise)
Preceding gene: 39998075
Following gene: 39998073
Centisome position: 85.88
GC content: 60.34
Gene sequence:
>537_bases TTGAGTGAGGTCCAGTATTGTTACGTGACTGTTGATCGCTTGGATTGCGCCGACATTTTGCCTTGTTTCAAGGCCGGACG TTCCTACATGGGCACTAGACGCACTACCATCGCCATCGCATCACTGCAGCTGCTCCTCGTTCTGTTCGTCCAGGTCGTGC CGCTCATTCATGCCGTTGCCGGGGCACAGGCCGGTTTCGTGAAAAAGGCGGGGTGTCACTGCACCGACGGCGAGTGCTGC GCCGCCATGGCCGGCATGGCCCAGGAGTGTCGGTGCGAAGGCTCCTGCGCGGCCAATCGCCATAAGAAGGAACCCGACTG TTGCTCAACGGGTGAGGAAGTGCCCGTTATCTCCTGCGGTTGTTGTAACCGCGATCCCCTTTCCCCAGCCGCCGTCCCTC TCATCAAGTGGGAGTGCATTCCCCCTCTGTTCATCCTTGAGGCCGGGGTTACCCGGTGTACCGTCAACCTCTCGTCCTAT TCGGGCATGCTGACCGCTTTCCGGCCCGAGCCCTCCATCCCTCCTCCAGAAGCCTAG
Upstream 100 bases:
>100_bases CATGATCAACTTCCTGGCTTTCGCCCTTGCCTTTACCCTGCGGAGGCTGCGGCGGTAATGGCCGCAGGAGTGGCACGCAC GGTTGCATGCTGCTTGACAA
Downstream 100 bases:
>100_bases TGTCCCGATTGGTTGGTTCTTCCTCGTAATTGTGCCCCTTTTGACTGCTGCCGTCGTTATGGCTGGGCCAGGTCTGTGTC GCCGCGCCTTGGCAGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSEVQYCYVTVDRLDCADILPCFKAGRSYMGTRRTTIAIASLQLLLVLFVQVVPLIHAVAGAQAGFVKKAGCHCTDGECC AAMAGMAQECRCEGSCAANRHKKEPDCCSTGEEVPVISCGCCNRDPLSPAAVPLIKWECIPPLFILEAGVTRCTVNLSSY SGMLTAFRPEPSIPPPEA
Sequences:
>Translated_178_residues MSEVQYCYVTVDRLDCADILPCFKAGRSYMGTRRTTIAIASLQLLLVLFVQVVPLIHAVAGAQAGFVKKAGCHCTDGECC AAMAGMAQECRCEGSCAANRHKKEPDCCSTGEEVPVISCGCCNRDPLSPAAVPLIKWECIPPLFILEAGVTRCTVNLSSY SGMLTAFRPEPSIPPPEA >Mature_177_residues SEVQYCYVTVDRLDCADILPCFKAGRSYMGTRRTTIAIASLQLLLVLFVQVVPLIHAVAGAQAGFVKKAGCHCTDGECCA AMAGMAQECRCEGSCAANRHKKEPDCCSTGEEVPVISCGCCNRDPLSPAAVPLIKWECIPPLFILEAGVTRCTVNLSSYS GMLTAFRPEPSIPPPEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19006; Mature: 18875
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 12.4 %Cys+Met (Translated Protein) 9.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 11.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVQYCYVTVDRLDCADILPCFKAGRSYMGTRRTTIAIASLQLLLVLFVQVVPLIHAVA CCCCEEEEEEECCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GAQAGFVKKAGCHCTDGECCAAMAGMAQECRCEGSCAANRHKKEPDCCSTGEEVPVISCG CCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECC CCNRDPLSPAAVPLIKWECIPPLFILEAGVTRCTVNLSSYSGMLTAFRPEPSIPPPEA CCCCCCCCCCCCCEEEECCCCCHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure SEVQYCYVTVDRLDCADILPCFKAGRSYMGTRRTTIAIASLQLLLVLFVQVVPLIHAVA CCCEEEEEEECCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GAQAGFVKKAGCHCTDGECCAAMAGMAQECRCEGSCAANRHKKEPDCCSTGEEVPVISCG CCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECC CCNRDPLSPAAVPLIKWECIPPLFILEAGVTRCTVNLSSYSGMLTAFRPEPSIPPPEA CCCCCCCCCCCCCEEEECCCCCHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA