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The map label for this gene is dsbD [H]

Identifier: 39998049

GI number: 39998049

Start: 3255253

End: 3255939

Strand: Direct

Name: dsbD [H]

Synonym: GSU2958

Alternate gene names: 39998049

Gene position: 3255253-3255939 (Clockwise)

Preceding gene: 39998048

Following gene: 39998050

Centisome position: 85.35

GC content: 64.77

Gene sequence:

>687_bases
GTGAGCTTCCTCGACAACATTGAACAGATTGTCGCGACTCAGCCTTTCCTGGCCTTCGTTGCGGTCTTTGTCGGGGGAGT
GCTCTCGTCGGCCTCCCCCTGCGTCCTGGCCACGATTCCCCTGGTGGTGGGGTTCGTGGGAGGCTATGCGGCAGAGAGCC
GGAAAAAGGCATTTCTCTACTCTCTGTCCTTCATCGTGGGCCTATCGCTCACCTTCACCATCTTCGGCGCAGCGGCGGCC
CTCCTGGGGACCATGTTCGGCACGGTGGGGGGATGGTGGTATGCGGCCGTGGGCGCCGTGGCGGTGGCCATGGGGCTCCA
GATGATGGGGTTCTACGAACTGCGGCTCCCGGTCCTGCCGCAATTCAGACCGAAACGGGGCGGATTCTGGGGGGCCCTCC
TCCTGGGACTCTTCTTCGGGGTCGCCTCATCCCCGTGTGCCACGCCGGTTCTCGTCGTCATCCTCTCCTTCGCTGCCCTG
CAAGGAAACATCCTCTACGGCACGCTTCTCCTCTTCACCTACGCCCTCGGCCACTGCCTCCTCATGCTCGCGGCCGGCAC
CTTTACCGGCTTCGTTGAAGCCTTCGCCGCCTCCCGGGGAGTGGCCAACGTCTCCCACTGGGCAAAGCGGGGGAGCGGTG
CCGTCATCGCCCTGGCCGGGGCATGGTTCATCTGGCGGGCGTTCTGA

Upstream 100 bases:

>100_bases
CCCAGATATTCTTCGACGCCCGGGGAACGGAAGTGAAGCGCCACATGGGCTTCATGGACAGGGCCGACATCGTCAGGGAG
CTGAGTGTCCTGGGGGTACG

Downstream 100 bases:

>100_bases
CCCTATAGGCCCAAGGAGACTCATTCCCCATGCCAGCCACATCTCCTCATTCCCCGGAACTCTACCGCAAAGCGGCGCTC
CTGGCCCTCATCACCATCAT

Product: thiol:disulfide interchange protein

Products: NA

Alternate protein names: Protein-disulfide reductase; Disulfide reductase [H]

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSFLDNIEQIVATQPFLAFVAVFVGGVLSSASPCVLATIPLVVGFVGGYAAESRKKAFLYSLSFIVGLSLTFTIFGAAAA
LLGTMFGTVGGWWYAAVGAVAVAMGLQMMGFYELRLPVLPQFRPKRGGFWGALLLGLFFGVASSPCATPVLVVILSFAAL
QGNILYGTLLLFTYALGHCLLMLAAGTFTGFVEAFAASRGVANVSHWAKRGSGAVIALAGAWFIWRAF

Sequences:

>Translated_228_residues
MSFLDNIEQIVATQPFLAFVAVFVGGVLSSASPCVLATIPLVVGFVGGYAAESRKKAFLYSLSFIVGLSLTFTIFGAAAA
LLGTMFGTVGGWWYAAVGAVAVAMGLQMMGFYELRLPVLPQFRPKRGGFWGALLLGLFFGVASSPCATPVLVVILSFAAL
QGNILYGTLLLFTYALGHCLLMLAAGTFTGFVEAFAASRGVANVSHWAKRGSGAVIALAGAWFIWRAF
>Mature_227_residues
SFLDNIEQIVATQPFLAFVAVFVGGVLSSASPCVLATIPLVVGFVGGYAAESRKKAFLYSLSFIVGLSLTFTIFGAAAAL
LGTMFGTVGGWWYAAVGAVAVAMGLQMMGFYELRLPVLPQFRPKRGGFWGALLLGLFFGVASSPCATPVLVVILSFAALQ
GNILYGTLLLFTYALGHCLLMLAAGTFTGFVEAFAASRGVANVSHWAKRGSGAVIALAGAWFIWRAF

Specific function: Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1790578, Length=181, Percent_Identity=33.1491712707182, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834
- InterPro:   IPR022910
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02683 DsbD; PF00085 Thioredoxin [H]

EC number: =1.8.1.8 [H]

Molecular weight: Translated: 23944; Mature: 23812

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLDNIEQIVATQPFLAFVAVFVGGVLSSASPCVLATIPLVVGFVGGYAAESRKKAFLY
CCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLSFIVGLSLTFTIFGAAAALLGTMFGTVGGWWYAAVGAVAVAMGLQMMGFYELRLPVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QFRPKRGGFWGALLLGLFFGVASSPCATPVLVVILSFAALQGNILYGTLLLFTYALGHCL
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LMLAAGTFTGFVEAFAASRGVANVSHWAKRGSGAVIALAGAWFIWRAF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEHHHHHHHCC
>Mature Secondary Structure 
SFLDNIEQIVATQPFLAFVAVFVGGVLSSASPCVLATIPLVVGFVGGYAAESRKKAFLY
CHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLSFIVGLSLTFTIFGAAAALLGTMFGTVGGWWYAAVGAVAVAMGLQMMGFYELRLPVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QFRPKRGGFWGALLLGLFFGVASSPCATPVLVVILSFAALQGNILYGTLLLFTYALGHCL
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LMLAAGTFTGFVEAFAASRGVANVSHWAKRGSGAVIALAGAWFIWRAF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA