| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is ferA
Identifier: 39997825
GI number: 39997825
Start: 3007851
End: 3010157
Strand: Reverse
Name: ferA
Synonym: GSU2731
Alternate gene names: NA
Gene position: 3010157-3007851 (Counterclockwise)
Preceding gene: 39997826
Following gene: 39997824
Centisome position: 78.92
GC content: 63.11
Gene sequence:
>2307_bases ATGAGTAGAAAAGTAACAAAGTATTCTGCTGTGCTTGCGGTTTCGTTGTTCGCGGCGGCGCTTGCCGGCTGCGGCTCCGA AAACAAGGAGGGGACGGTCGGAACCGGCCCTGGCGGCGTGGCAACCGTGGGCGATACCGCTTGCGTCCAGTGTCACAGCG CTGTCGTGGATCCGCTGACCGGCGAGTCCATCATCACGCAGTACACCCGCTCATTCCACTACAGCAAGGGTGTCGGCTGC GAAGGCTGCCACGGCGGCGGCGCCCAGCACAATGGCGTCGGTCCCCTGCCGTTCCCGCTGGCCGGCCAGAGTGAGGCCCA GATAGCCGCCCGGTGCGCCTCCTGCCACAATGGTGTGATTGCTCCCCTGAGCAGCTCGCCCAATTTCGTCAACGGCAACC ATGCCAACCCCTTTGGCGGGGAAGAGGCCAAGGAAAACCTCTGCAGCCGCTGTCACTCCCACGAAGGAGCCATTTTCGGG GCACAGGCGGGCTTCACCGGCGACGGGAACATCCTGAGAAACGCCGCCTACCAGCCGGTGTATCCCCAGGACCCCGAGAC CTTCAACGTCATGACGTGCGCCACCTGCCATCAGCACGGCGGGGCTCAGCGTCAGGTCTTCACCCAGATCTCGACGGCCG GCGTGCCGAATAGCCGGCGGACGGTGGCCTGGGATCCGAACCGCAACAGCATCAATGATCAGTACGACCTCTGCACCAGC TGCCACACCGTCAACACCATGACCGGCACCCTGATCGGCAGCGGCAACGTTCTCCAGATCTTCACCAGCAACGCCGTCGG CTCCGGCACCAAGAGCGTGACCACGGCCCCCTTCTACCACAACACCCGTTGGTTCCGGACCCTGCCTTCGACCCACTACG ACTTCCCGGAATCCAAGACCACGGCCAGCGGCACCACGATCGAAGGGTATGTAATCCGGCGCAATACCGCCAACCCCTGC TTCGACTGCCACGGTCACGAGTTCCAGACCAACACCCGGCGGCTGGCCGGAGCGGACCGGCCTAACACTATTTTCCTCGA CTGGGGACAGTCGGCCCATGGTGGCAAGCTCCTCCAGGCCAAGGTGGCCGCAGCGGCCCTGGCGAGCTCCGGCGCGGCTG AAGTGGACGATGTCATGAAGGCCGGCGCCACCGACGCCACGGCTCCCGGCTGGACCCACTACAACTGGGACGATACTGCC AGCCGCGGCGCCTGCCAGCGCTGCCACACTTCGACCGGCGCCTCGAACTTCCTCAACAACCCCGCCGGATATGACAGGAC CGGCGCAGGCAACAGCTTCACTCATTTGGCCGGCTGGACCAGCAGCAACAAGCGGTCCGACCAGAACGAACTGCTCTACT GCTGGGGCTGCCACACCAAGGCCGGCACCGGTGAGCTGCGCAACCCCGGGGCCATCACCGAGGTTTATCCTGGGATCAAC TCAACGAGCACTGGAACTACCGGTTTGGACGTTACGGTTTCCTATCCTGATATCAAAGGGTCTAACGTGTGCATGGGGTG TCACCTCGGGCGTGAAGTTGGCGACAACATCAAGGCAATCACCGACGCGGATGGTATCCTTGGCTTCGTGAACTCCCACT ATCTCACCGCAGGCGGCCAGCTGTTCGGCACCACCGGTTATGAGTACGCAACCCGCAGCTACGCCAATCCGGCCTTCTTC CAGCATGACAAGATCGGCACCGCCGCTGCCCCCGGCACCGGCACCAACGGCCCCTGCGCCGGCTGCCACATGACCACCCC GACCTCGCACCTGTTCCTGCCGGTGACCAAGGACGGCACGGGCGCCATCACTGCCATTACCAGCACTGCCTGCGTCACCT GCCATGCCGGTACCTTTGCGCTCACCCCCGAGGGACTGACCGCCGAAGAAGAAGAGTACGTGGCATCCCTTGAAGCCCTC AAAGCGGCTCTGGCCGGCAAGGGAATCCTCTTCTTCAACGCCCATCCGTATTTCTACAGAGATACGAATGCCAACGGCAT TGCCGATCCTGGGGAGACTGTTTCCTCGAACGCCTTCACCAACTGGGCTGGCGTGTACGGGCTTGCCCTCTGGCAAGATG TCATGGGCGCTGCATTCAACGCCAACCTGCTGATCCACGATCCGGGCGGCTATGCCCACAACCGCTTCTACAGCAAGCGT TTGATCTGGGATTCCATCGACTTCATCTTTGACGGCGTACTGAACAACGACGTCACGGCTGCGATCGATGCCCAGGTAAC GGCGGCTCGACTGGACAGCGCCACGGCAACGGCCGCCAAGGCCTACCTCGGGGCGACCCGTCCGTAA
Upstream 100 bases:
>100_bases AACAATTACAAGGATCGGGCCGGGAGCCGGGTGTGCACGAAGTGTCACCTTCCTGGTACGTACTAATTGAGAGCACCACA CACCACAAGGAGGAAATGGC
Downstream 100 bases:
>100_bases TAGCGGACGCGACGTTCCGGCGCATCATCCGATGCACAACCGCAAGGCCGGTCTCCCTCCGGGGGGCCGGCCTTGCACTT TTCAGGCGCAGTCTGCCCCG
Product: polyheme membrane-associated cytochrome C
Products: NA
Alternate protein names: Lipoprotein Cytochrome C; Cytochrome C
Number of amino acids: Translated: 768; Mature: 767
Protein sequence:
>768_residues MSRKVTKYSAVLAVSLFAAALAGCGSENKEGTVGTGPGGVATVGDTACVQCHSAVVDPLTGESIITQYTRSFHYSKGVGC EGCHGGGAQHNGVGPLPFPLAGQSEAQIAARCASCHNGVIAPLSSSPNFVNGNHANPFGGEEAKENLCSRCHSHEGAIFG AQAGFTGDGNILRNAAYQPVYPQDPETFNVMTCATCHQHGGAQRQVFTQISTAGVPNSRRTVAWDPNRNSINDQYDLCTS CHTVNTMTGTLIGSGNVLQIFTSNAVGSGTKSVTTAPFYHNTRWFRTLPSTHYDFPESKTTASGTTIEGYVIRRNTANPC FDCHGHEFQTNTRRLAGADRPNTIFLDWGQSAHGGKLLQAKVAAAALASSGAAEVDDVMKAGATDATAPGWTHYNWDDTA SRGACQRCHTSTGASNFLNNPAGYDRTGAGNSFTHLAGWTSSNKRSDQNELLYCWGCHTKAGTGELRNPGAITEVYPGIN STSTGTTGLDVTVSYPDIKGSNVCMGCHLGREVGDNIKAITDADGILGFVNSHYLTAGGQLFGTTGYEYATRSYANPAFF QHDKIGTAAAPGTGTNGPCAGCHMTTPTSHLFLPVTKDGTGAITAITSTACVTCHAGTFALTPEGLTAEEEEYVASLEAL KAALAGKGILFFNAHPYFYRDTNANGIADPGETVSSNAFTNWAGVYGLALWQDVMGAAFNANLLIHDPGGYAHNRFYSKR LIWDSIDFIFDGVLNNDVTAAIDAQVTAARLDSATATAAKAYLGATRP
Sequences:
>Translated_768_residues MSRKVTKYSAVLAVSLFAAALAGCGSENKEGTVGTGPGGVATVGDTACVQCHSAVVDPLTGESIITQYTRSFHYSKGVGC EGCHGGGAQHNGVGPLPFPLAGQSEAQIAARCASCHNGVIAPLSSSPNFVNGNHANPFGGEEAKENLCSRCHSHEGAIFG AQAGFTGDGNILRNAAYQPVYPQDPETFNVMTCATCHQHGGAQRQVFTQISTAGVPNSRRTVAWDPNRNSINDQYDLCTS CHTVNTMTGTLIGSGNVLQIFTSNAVGSGTKSVTTAPFYHNTRWFRTLPSTHYDFPESKTTASGTTIEGYVIRRNTANPC FDCHGHEFQTNTRRLAGADRPNTIFLDWGQSAHGGKLLQAKVAAAALASSGAAEVDDVMKAGATDATAPGWTHYNWDDTA SRGACQRCHTSTGASNFLNNPAGYDRTGAGNSFTHLAGWTSSNKRSDQNELLYCWGCHTKAGTGELRNPGAITEVYPGIN STSTGTTGLDVTVSYPDIKGSNVCMGCHLGREVGDNIKAITDADGILGFVNSHYLTAGGQLFGTTGYEYATRSYANPAFF QHDKIGTAAAPGTGTNGPCAGCHMTTPTSHLFLPVTKDGTGAITAITSTACVTCHAGTFALTPEGLTAEEEEYVASLEAL KAALAGKGILFFNAHPYFYRDTNANGIADPGETVSSNAFTNWAGVYGLALWQDVMGAAFNANLLIHDPGGYAHNRFYSKR LIWDSIDFIFDGVLNNDVTAAIDAQVTAARLDSATATAAKAYLGATRP >Mature_767_residues SRKVTKYSAVLAVSLFAAALAGCGSENKEGTVGTGPGGVATVGDTACVQCHSAVVDPLTGESIITQYTRSFHYSKGVGCE GCHGGGAQHNGVGPLPFPLAGQSEAQIAARCASCHNGVIAPLSSSPNFVNGNHANPFGGEEAKENLCSRCHSHEGAIFGA QAGFTGDGNILRNAAYQPVYPQDPETFNVMTCATCHQHGGAQRQVFTQISTAGVPNSRRTVAWDPNRNSINDQYDLCTSC HTVNTMTGTLIGSGNVLQIFTSNAVGSGTKSVTTAPFYHNTRWFRTLPSTHYDFPESKTTASGTTIEGYVIRRNTANPCF DCHGHEFQTNTRRLAGADRPNTIFLDWGQSAHGGKLLQAKVAAAALASSGAAEVDDVMKAGATDATAPGWTHYNWDDTAS RGACQRCHTSTGASNFLNNPAGYDRTGAGNSFTHLAGWTSSNKRSDQNELLYCWGCHTKAGTGELRNPGAITEVYPGINS TSTGTTGLDVTVSYPDIKGSNVCMGCHLGREVGDNIKAITDADGILGFVNSHYLTAGGQLFGTTGYEYATRSYANPAFFQ HDKIGTAAAPGTGTNGPCAGCHMTTPTSHLFLPVTKDGTGAITAITSTACVTCHAGTFALTPEGLTAEEEEYVASLEALK AALAGKGILFFNAHPYFYRDTNANGIADPGETVSSNAFTNWAGVYGLALWQDVMGAAFNANLLIHDPGGYAHNRFYSKRL IWDSIDFIFDGVLNNDVTAAIDAQVTAARLDSATATAAKAYLGATRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80592; Mature: 80460
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00108 PROTEIN_KINASE_ST ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKVTKYSAVLAVSLFAAALAGCGSENKEGTVGTGPGGVATVGDTACVQCHSAVVDPLT CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCC GESIITQYTRSFHYSKGVGCEGCHGGGAQHNGVGPLPFPLAGQSEAQIAARCASCHNGVI CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE APLSSSPNFVNGNHANPFGGEEAKENLCSRCHSHEGAIFGAQAGFTGDGNILRNAAYQPV EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHCCCCCCC YPQDPETFNVMTCATCHQHGGAQRQVFTQISTAGVPNSRRTVAWDPNRNSINDQYDLCTS CCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHH CHTVNTMTGTLIGSGNVLQIFTSNAVGSGTKSVTTAPFYHNTRWFRTLPSTHYDFPESKT CEECCCEEEEEECCCCEEEEEECCCCCCCCCCEEECCCEECCCCEEECCCCCCCCCCCCC TASGTTIEGYVIRRNTANPCFDCHGHEFQTNTRRLAGADRPNTIFLDWGQSAHGGKLLQA CCCCCEEEEEEEECCCCCCCCCCCCCEECCCCHHHCCCCCCCEEEEECCCCCCCCCHHHH KVAAAALASSGAAEVDDVMKAGATDATAPGWTHYNWDDTASRGACQRCHTSTGASNFLNN HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHCCC PAGYDRTGAGNSFTHLAGWTSSNKRSDQNELLYCWGCHTKAGTGELRNPGAITEVYPGIN CCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCC STSTGTTGLDVTVSYPDIKGSNVCMGCHLGREVGDNIKAITDADGILGFVNSHYLTAGGQ CCCCCCCCEEEEEECCCCCCCCEEEEECCCHHHCCCCEEEECCCHHHHHHCCEEEECCCE LFGTTGYEYATRSYANPAFFQHDKIGTAAAPGTGTNGPCAGCHMTTPTSHLFLPVTKDGT EEECCCHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCC GAITAITSTACVTCHAGTFALTPEGLTAEEEEYVASLEALKAALAGKGILFFNAHPYFYR CEEEEEECCEEEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEE DTNANGIADPGETVSSNAFTNWAGVYGLALWQDVMGAAFNANLLIHDPGGYAHNRFYSKR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH LIWDSIDFIFDGVLNNDVTAAIDAQVTAARLDSATATAAKAYLGATRP HHHHHHHHHHHHHCCCCCEEEEECEEEHHHHCCHHHHHHHHHHCCCCC >Mature Secondary Structure SRKVTKYSAVLAVSLFAAALAGCGSENKEGTVGTGPGGVATVGDTACVQCHSAVVDPLT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCC GESIITQYTRSFHYSKGVGCEGCHGGGAQHNGVGPLPFPLAGQSEAQIAARCASCHNGVI CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE APLSSSPNFVNGNHANPFGGEEAKENLCSRCHSHEGAIFGAQAGFTGDGNILRNAAYQPV EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHCCCCCCC YPQDPETFNVMTCATCHQHGGAQRQVFTQISTAGVPNSRRTVAWDPNRNSINDQYDLCTS CCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHH CHTVNTMTGTLIGSGNVLQIFTSNAVGSGTKSVTTAPFYHNTRWFRTLPSTHYDFPESKT CEECCCEEEEEECCCCEEEEEECCCCCCCCCCEEECCCEECCCCEEECCCCCCCCCCCCC TASGTTIEGYVIRRNTANPCFDCHGHEFQTNTRRLAGADRPNTIFLDWGQSAHGGKLLQA CCCCCEEEEEEEECCCCCCCCCCCCCEECCCCHHHCCCCCCCEEEEECCCCCCCCCHHHH KVAAAALASSGAAEVDDVMKAGATDATAPGWTHYNWDDTASRGACQRCHTSTGASNFLNN HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHCCC PAGYDRTGAGNSFTHLAGWTSSNKRSDQNELLYCWGCHTKAGTGELRNPGAITEVYPGIN CCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCC STSTGTTGLDVTVSYPDIKGSNVCMGCHLGREVGDNIKAITDADGILGFVNSHYLTAGGQ CCCCCCCCEEEEEECCCCCCCCEEEEECCCHHHCCCCEEEECCCHHHHHHCCEEEECCCE LFGTTGYEYATRSYANPAFFQHDKIGTAAAPGTGTNGPCAGCHMTTPTSHLFLPVTKDGT EEECCCHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCC GAITAITSTACVTCHAGTFALTPEGLTAEEEEYVASLEALKAALAGKGILFFNAHPYFYR CEEEEEECCEEEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEE DTNANGIADPGETVSSNAFTNWAGVYGLALWQDVMGAAFNANLLIHDPGGYAHNRFYSKR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH LIWDSIDFIFDGVLNNDVTAAIDAQVTAARLDSATATAAKAYLGATRP HHHHHHHHHHHHHCCCCCEEEEECEEEHHHHCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA