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The map label for this gene is 39997819

Identifier: 39997819

GI number: 39997819

Start: 3003210

End: 3003683

Strand: Reverse

Name: 39997819

Synonym: GSU2725

Alternate gene names: NA

Gene position: 3003683-3003210 (Counterclockwise)

Preceding gene: 39997820

Following gene: 39997818

Centisome position: 78.75

GC content: 63.08

Gene sequence:

>474_bases
ATGAAACCGATACAGCTCTTCATTGTTGCAGTGGCCGTGACGGGCGCCCTCACCCTGACCGCCTGCACCCATATGCTTTC
GAAGGAATCGAGCCTGCCGTCCTGGCATCCGGAATCACTGGCCACGGGGCGGGTTGACTGCACCGAATGCCACGAGGACC
GGGCGCGAGGAGTGCTCAAACCCTATGCCGCCTTCAGCCACACGCCGGTCTTCGTGCGCGACCACCGCTACTATGCCGGC
CAGGATGACCGTCTGTGCGCGTCATGTCACAAGCGGTCCTTCTGCTACGACTGCCATGCCAACGAACTGGAGATCAAACC
GTCGGTCATGCACGGGGACCGGCCCGACCGGCAGCTGGTCCACCGGGGCGATTACCTGACCCGGCACCAGATCGACGGCA
GGATCGACCCGACCAGTTGCTTCCGCTGCCACGGCCGGACCAACAATGAGCAGTGCGTTGCATGCCACAGATAG

Upstream 100 bases:

>100_bases
GCGATATCAGCTATGGCGAGAATCCTCGCCTGGATTCGGAGACCCGCGGCGTGGTCCGGCTTGTCTATAACTTCAGCCAT
TCGGGCAAAGGAGCGGCGAA

Downstream 100 bases:

>100_bases
GAGGCTCACGGTGAAATCGACAATCGTTCGTTTCCTGACTGTATTCTGTGTCGGGCTTGCTCTCTGGGGCTGTTCCAGCG
GCAGTGGAGACGCTCCGGCC

Product: cytochrome C

Products: NA

Alternate protein names: Lipoprotein Cytochrome C

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKPIQLFIVAVAVTGALTLTACTHMLSKESSLPSWHPESLATGRVDCTECHEDRARGVLKPYAAFSHTPVFVRDHRYYAG
QDDRLCASCHKRSFCYDCHANELEIKPSVMHGDRPDRQLVHRGDYLTRHQIDGRIDPTSCFRCHGRTNNEQCVACHR

Sequences:

>Translated_157_residues
MKPIQLFIVAVAVTGALTLTACTHMLSKESSLPSWHPESLATGRVDCTECHEDRARGVLKPYAAFSHTPVFVRDHRYYAG
QDDRLCASCHKRSFCYDCHANELEIKPSVMHGDRPDRQLVHRGDYLTRHQIDGRIDPTSCFRCHGRTNNEQCVACHR
>Mature_157_residues
MKPIQLFIVAVAVTGALTLTACTHMLSKESSLPSWHPESLATGRVDCTECHEDRARGVLKPYAAFSHTPVFVRDHRYYAG
QDDRLCASCHKRSFCYDCHANELEIKPSVMHGDRPDRQLVHRGDYLTRHQIDGRIDPTSCFRCHGRTNNEQCVACHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17836; Mature: 17836

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
7.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIQLFIVAVAVTGALTLTACTHMLSKESSLPSWHPESLATGRVDCTECHEDRARGVLK
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
PYAAFSHTPVFVRDHRYYAGQDDRLCASCHKRSFCYDCHANELEIKPSVMHGDRPDRQLV
CHHHCCCCCEEEECCCEECCCCCHHHHHHHCCCEEEECCCCCEEECCHHCCCCCCCHHHH
HRGDYLTRHQIDGRIDPTSCFRCHGRTNNEQCVACHR
HCCCCCEEECCCCCCCCCHHEEECCCCCCCCEEEECC
>Mature Secondary Structure
MKPIQLFIVAVAVTGALTLTACTHMLSKESSLPSWHPESLATGRVDCTECHEDRARGVLK
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
PYAAFSHTPVFVRDHRYYAGQDDRLCASCHKRSFCYDCHANELEIKPSVMHGDRPDRQLV
CHHHCCCCCEEEECCCEECCCCCHHHHHHHCCCEEEECCCCCEEECCHHCCCCCCCHHHH
HRGDYLTRHQIDGRIDPTSCFRCHGRTNNEQCVACHR
HCCCCCEEECCCCCCCCCHHEEECCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA