| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997809
Identifier: 39997809
GI number: 39997809
Start: 2991035
End: 2993629
Strand: Reverse
Name: 39997809
Synonym: GSU2715
Alternate gene names: NA
Gene position: 2993629-2991035 (Counterclockwise)
Preceding gene: 39997811
Following gene: 39997808
Centisome position: 78.49
GC content: 60.92
Gene sequence:
>2595_bases ATGATCGGATTGATGATTCGGGTTGCAGGACAGCTTGGCCGTTACGCTCGTCTCCTGCCGGCAACTGCCGGCATGGTGCT CGTGCTGCAGGTAGCCGCCCAGGCCGATGTTTTGACTATCAACGGCGGTGCGAAGTTCACCAACTATCCCATGGTGACGC TCGGCATCAATGCCGCCCTGCACGGGGGAACCGTGCAGGCGATGCGCTTCAGCATCGACGACAGCACCTGGACAGACTGG GAGCCGGTTGCGGCATCAAAGCGCTTTAAGCTGACTGAACCGCTCAGTCTTTCCTTTTACGACGTATTCCTCCAGTTTCA GCAGGACGGGGTGGCGGTCCCCGATCCCCCTTATCCCGCCGCCATCGTTTATGACGACCTCATCGATACCGGCTTTTTCG GCGGCCAGGGAGTGGCATTGTTAGGCGGCACGGGGAGCGACCGGGGCAAGGGGGTCGTGGTGCAGCCGGACGGCAAGCTG CTGGTGGTCGGCACCGTGGAGCAGGCGGCGGGCAATACCGACATCGTCCTCTGGCGACTCACGGCGCAGGGGGAGCCGGA CACCGGCTTCGGGGTTCAGGGTTCAGTCGTGATTGACGCGGGCACGGCTGACCGTGCCGCCGGCGTGGCGTTGCAGGGCG ACGGCAAAATTCTCGTTCTCGGTACCGTGGGAAGTGCCACTACCGCCTGGGAGGTTCGACGCTACGATTCAGCCGGCGTA CTTGATACCTCTTTCGGCACGGGCGGGAAGTACCAGGAGGGGGCCTCCGGCGCCAACGAGGCCGGAAATCTGCTGGTTCA GCCCGACGGCAGGATCGTGATTATCGGCTCCAGGGATGTTGCCGGAGCGAAAAAAATCCAGGTGATCCGTCTTACGGCGA CCGGAGTGCTCGACAGCGCCTTCAACGGCAATACCGGCTACTACCGGCCCAACCTTCCCGGCAACAGTTTCGGGAATGGA GTAGCGCTCCAGGCGGACGGGAAGATACTGCTCGTCGGCACCTATGCTAACCCGAGCGGCGAAACCGATCTCTTTGTGCA GCGACTCAAAACCGACGGCACCCTCGACAACTTTAATGACGGATTGAATAATTTCTTCATGGCCGGCGATGCCGGCAACG ACGAAGGCCTGGGGATAGCCGTCCAGCCTGACGGCAAAATCGTGGTGGTAGGGGCCTATCAGTGGGGTGCGGGTGACACG GATATCTGGGTGCTCCGCCTCAATGAGAACGGTACGCGGGACAATGATTTCAATGCCCCGGTGGGGGATTACAAGGATGG CGACGTGTATAACGACAGGGCCGAAGCACTGGTGATCCAGCCTGACGGCAAGATCGTTGTGGTGGGGTCCTTCGGTTACG CGACCGACACCGATATCCTTGTGTTCCGACTCAATGCCGACGGAACTACAGACAACACCATCTACAATTTCTACGGGTTC TATACCATCAATTCGGGCGATGACGAAGGACAGGGCGTAGCGCTCCAACCCGATGGAAACATTGTCCTGGTGAGCACCTT CACCCGGGAGGAAGGCGATACCGACATCCACGTCCACCGGATCTTCGGCCGGAAGGAGACCCTCAGCGTTTCGACTACGG GTGGGGGCAGCGTTGCCGATGATCTGGGCGCCTTTACCTGGGTGGATCTGTCGGGAGAAGGCGACTACCTTCAGGGCGAT TCGGTTGCCCTCACCGCGGCTCCTGCAACCGGCTATGTCTTTACGGGGTGGGGCGGCGACTGCGCCGGCACCTCTCCCGT CTGCACGGTAACCATGGATGGTGCGAAGAACGTGACAGCATCCTTCTCCCTGGATCGGCCGGCCGCGCCGACCGGTCTCT CCGGCGTGCCGGGCAATGGTACGGCGGGCATTTCCTGGACCGCCAGCCAGGAGTCGGGCATTACCGGCTACAAGGTTTAC TACGGTATTACATCGGGTAACTATGCGACCCCCGACCCGGTTGGCACTACCCCGGCACATGTGATTTCCGGCCTGATGAA CGGCGTTACCTACTACATTGCTGTATCGGTACTCAAGAACGGCGTGGAAGGACCGAAATCGGCCGAAATCACCGTTACGC CCGGCATCAACCTCAGTGTGACCGTTGTCGGCACGGGTGGCGGCACCGTGTCGAGCGCGCCGGGAGGCATTAGCTGTCTC GACGGTTCAGGGTGCAGCGCGGTCTTTAATGCTGCTCCGGTGGTGCTCAGCGCAACGCCGAGCGCTGGATCGATTTTTGC CGGCTGGTCGGGTGCCTGCTCCGGTACTGATGGCTGTACGGTTACCCAGTATGGCCCCGTGGCCGTGACGGCAACATTCA CGAAAATGCCTCCCGTGAAGCTTACTGCGGGAACCACGAGCTATTATTCAACAATCGCTGAGGCCTATGCCGCGTGCATC GGGGGAACTTCATGCACCATCGAGACCCAGGCGACCGAGCTTGCCGGCAACGTGACCTTGGCAAACGCCATAGCCGTGCT CTTCAAGGGAGGGTATGACGCAACGTTCTCGTCCAGCCCCGGCTTAACGACGTTGCAGGGCGTTGTTACGGTGGGTAGGG GCTCGCTCACGGCCCAGAATGTGGTCATCCGCTGA
Upstream 100 bases:
>100_bases CTGTCGACAGGCTGTCTTCACGCGGTGGAAATGATGTCTGGAAAATTAGAGTGGTCCCAGGTAGAATGTCTGCCTGAGTG TCAGTGCACGGAGGGGTAAG
Downstream 100 bases:
>100_bases CCGGGAGCCACGGCCAATGAAAAAACCCCGCCGGGCTTCATGCCGGCGGGGTTTTTTGCAAGCGAATTCGCTTGGTTCAT GTAAATGGCGGGCGATACTG
Product: fibronectin type III domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 864; Mature: 864
Protein sequence:
>864_residues MIGLMIRVAGQLGRYARLLPATAGMVLVLQVAAQADVLTINGGAKFTNYPMVTLGINAALHGGTVQAMRFSIDDSTWTDW EPVAASKRFKLTEPLSLSFYDVFLQFQQDGVAVPDPPYPAAIVYDDLIDTGFFGGQGVALLGGTGSDRGKGVVVQPDGKL LVVGTVEQAAGNTDIVLWRLTAQGEPDTGFGVQGSVVIDAGTADRAAGVALQGDGKILVLGTVGSATTAWEVRRYDSAGV LDTSFGTGGKYQEGASGANEAGNLLVQPDGRIVIIGSRDVAGAKKIQVIRLTATGVLDSAFNGNTGYYRPNLPGNSFGNG VALQADGKILLVGTYANPSGETDLFVQRLKTDGTLDNFNDGLNNFFMAGDAGNDEGLGIAVQPDGKIVVVGAYQWGAGDT DIWVLRLNENGTRDNDFNAPVGDYKDGDVYNDRAEALVIQPDGKIVVVGSFGYATDTDILVFRLNADGTTDNTIYNFYGF YTINSGDDEGQGVALQPDGNIVLVSTFTREEGDTDIHVHRIFGRKETLSVSTTGGGSVADDLGAFTWVDLSGEGDYLQGD SVALTAAPATGYVFTGWGGDCAGTSPVCTVTMDGAKNVTASFSLDRPAAPTGLSGVPGNGTAGISWTASQESGITGYKVY YGITSGNYATPDPVGTTPAHVISGLMNGVTYYIAVSVLKNGVEGPKSAEITVTPGINLSVTVVGTGGGTVSSAPGGISCL DGSGCSAVFNAAPVVLSATPSAGSIFAGWSGACSGTDGCTVTQYGPVAVTATFTKMPPVKLTAGTTSYYSTIAEAYAACI GGTSCTIETQATELAGNVTLANAIAVLFKGGYDATFSSSPGLTTLQGVVTVGRGSLTAQNVVIR
Sequences:
>Translated_864_residues MIGLMIRVAGQLGRYARLLPATAGMVLVLQVAAQADVLTINGGAKFTNYPMVTLGINAALHGGTVQAMRFSIDDSTWTDW EPVAASKRFKLTEPLSLSFYDVFLQFQQDGVAVPDPPYPAAIVYDDLIDTGFFGGQGVALLGGTGSDRGKGVVVQPDGKL LVVGTVEQAAGNTDIVLWRLTAQGEPDTGFGVQGSVVIDAGTADRAAGVALQGDGKILVLGTVGSATTAWEVRRYDSAGV LDTSFGTGGKYQEGASGANEAGNLLVQPDGRIVIIGSRDVAGAKKIQVIRLTATGVLDSAFNGNTGYYRPNLPGNSFGNG VALQADGKILLVGTYANPSGETDLFVQRLKTDGTLDNFNDGLNNFFMAGDAGNDEGLGIAVQPDGKIVVVGAYQWGAGDT DIWVLRLNENGTRDNDFNAPVGDYKDGDVYNDRAEALVIQPDGKIVVVGSFGYATDTDILVFRLNADGTTDNTIYNFYGF YTINSGDDEGQGVALQPDGNIVLVSTFTREEGDTDIHVHRIFGRKETLSVSTTGGGSVADDLGAFTWVDLSGEGDYLQGD SVALTAAPATGYVFTGWGGDCAGTSPVCTVTMDGAKNVTASFSLDRPAAPTGLSGVPGNGTAGISWTASQESGITGYKVY YGITSGNYATPDPVGTTPAHVISGLMNGVTYYIAVSVLKNGVEGPKSAEITVTPGINLSVTVVGTGGGTVSSAPGGISCL DGSGCSAVFNAAPVVLSATPSAGSIFAGWSGACSGTDGCTVTQYGPVAVTATFTKMPPVKLTAGTTSYYSTIAEAYAACI GGTSCTIETQATELAGNVTLANAIAVLFKGGYDATFSSSPGLTTLQGVVTVGRGSLTAQNVVIR >Mature_864_residues MIGLMIRVAGQLGRYARLLPATAGMVLVLQVAAQADVLTINGGAKFTNYPMVTLGINAALHGGTVQAMRFSIDDSTWTDW EPVAASKRFKLTEPLSLSFYDVFLQFQQDGVAVPDPPYPAAIVYDDLIDTGFFGGQGVALLGGTGSDRGKGVVVQPDGKL LVVGTVEQAAGNTDIVLWRLTAQGEPDTGFGVQGSVVIDAGTADRAAGVALQGDGKILVLGTVGSATTAWEVRRYDSAGV LDTSFGTGGKYQEGASGANEAGNLLVQPDGRIVIIGSRDVAGAKKIQVIRLTATGVLDSAFNGNTGYYRPNLPGNSFGNG VALQADGKILLVGTYANPSGETDLFVQRLKTDGTLDNFNDGLNNFFMAGDAGNDEGLGIAVQPDGKIVVVGAYQWGAGDT DIWVLRLNENGTRDNDFNAPVGDYKDGDVYNDRAEALVIQPDGKIVVVGSFGYATDTDILVFRLNADGTTDNTIYNFYGF YTINSGDDEGQGVALQPDGNIVLVSTFTREEGDTDIHVHRIFGRKETLSVSTTGGGSVADDLGAFTWVDLSGEGDYLQGD SVALTAAPATGYVFTGWGGDCAGTSPVCTVTMDGAKNVTASFSLDRPAAPTGLSGVPGNGTAGISWTASQESGITGYKVY YGITSGNYATPDPVGTTPAHVISGLMNGVTYYIAVSVLKNGVEGPKSAEITVTPGINLSVTVVGTGGGTVSSAPGGISCL DGSGCSAVFNAAPVVLSATPSAGSIFAGWSGACSGTDGCTVTQYGPVAVTATFTKMPPVKLTAGTTSYYSTIAEAYAACI GGTSCTIETQATELAGNVTLANAIAVLFKGGYDATFSSSPGLTTLQGVVTVGRGSLTAQNVVIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88615; Mature: 88615
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLMIRVAGQLGRYARLLPATAGMVLVLQVAAQADVLTINGGAKFTNYPMVTLGINAAL CEEEEEEEHHHHCHHHHHHHHCCCEEEEEEECCCCCEEEECCCCEECCCCEEEEEEEEEE HGGTVQAMRFSIDDSTWTDWEPVAASKRFKLTEPLSLSFYDVFLQFQQDGVAVPDPPYPA CCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCCCCCCCCCE AIVYDDLIDTGFFGGQGVALLGGTGSDRGKGVVVQPDGKLLVVGTVEQAAGNTDIVLWRL EEEEEHHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEHHHHCCCCEEEEEEE TAQGEPDTGFGVQGSVVIDAGTADRAAGVALQGDGKILVLGTVGSATTAWEVRRYDSAGV EECCCCCCCCCCCEEEEEECCCCCHHCCEEEECCCEEEEEECCCCCCEEEEEEECCCCCE LDTSFGTGGKYQEGASGANEAGNLLVQPDGRIVIIGSRDVAGAKKIQVIRLTATGVLDSA EECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEEEEEECCEEECC FNGNTGYYRPNLPGNSFGNGVALQADGKILLVGTYANPSGETDLFVQRLKTDGTLDNFND CCCCCCEECCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCC GLNNFFMAGDAGNDEGLGIAVQPDGKIVVVGAYQWGAGDTDIWVLRLNENGTRDNDFNAP CCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCC VGDYKDGDVYNDRAEALVIQPDGKIVVVGSFGYATDTDILVFRLNADGTTDNTIYNFYGF CCCCCCCCEECCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEEE YTINSGDDEGQGVALQPDGNIVLVSTFTREEGDTDIHVHRIFGRKETLSVSTTGGGSVAD EEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEEECCCEEEEEEECCCCCCHH DLGAFTWVDLSGEGDYLQGDSVALTAAPATGYVFTGWGGDCAGTSPVCTVTMDGAKNVTA HCCCEEEEEECCCCCEECCCCEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEE SFSLDRPAAPTGLSGVPGNGTAGISWTASQESGITGYKVYYGITSGNYATPDPVGTTPAH EEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHH VISGLMNGVTYYIAVSVLKNGVEGPKSAEITVTPGINLSVTVVGTGGGTVSSAPGGISCL HHHHHHHHHEEEHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCEEEE DGSGCSAVFNAAPVVLSATPSAGSIFAGWSGACSGTDGCTVTQYGPVAVTATFTKMPPVK CCCCCCCHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCEEEECCCEEEEEEECCCCCEE LTAGTTSYYSTIAEAYAACIGGTSCTIETQATELAGNVTLANAIAVLFKGGYDATFSSSP EEECCHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCEEHHHEEEEEEECCCCCEECCCC GLTTLQGVVTVGRGSLTAQNVVIR CCEEEEEEEEECCCCEEECCEEEC >Mature Secondary Structure MIGLMIRVAGQLGRYARLLPATAGMVLVLQVAAQADVLTINGGAKFTNYPMVTLGINAAL CEEEEEEEHHHHCHHHHHHHHCCCEEEEEEECCCCCEEEECCCCEECCCCEEEEEEEEEE HGGTVQAMRFSIDDSTWTDWEPVAASKRFKLTEPLSLSFYDVFLQFQQDGVAVPDPPYPA CCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCCCCCCCCCE AIVYDDLIDTGFFGGQGVALLGGTGSDRGKGVVVQPDGKLLVVGTVEQAAGNTDIVLWRL EEEEEHHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEHHHHCCCCEEEEEEE TAQGEPDTGFGVQGSVVIDAGTADRAAGVALQGDGKILVLGTVGSATTAWEVRRYDSAGV EECCCCCCCCCCCEEEEEECCCCCHHCCEEEECCCEEEEEECCCCCCEEEEEEECCCCCE LDTSFGTGGKYQEGASGANEAGNLLVQPDGRIVIIGSRDVAGAKKIQVIRLTATGVLDSA EECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEEEEEECCEEECC FNGNTGYYRPNLPGNSFGNGVALQADGKILLVGTYANPSGETDLFVQRLKTDGTLDNFND CCCCCCEECCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCC GLNNFFMAGDAGNDEGLGIAVQPDGKIVVVGAYQWGAGDTDIWVLRLNENGTRDNDFNAP CCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCC VGDYKDGDVYNDRAEALVIQPDGKIVVVGSFGYATDTDILVFRLNADGTTDNTIYNFYGF CCCCCCCCEECCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEEE YTINSGDDEGQGVALQPDGNIVLVSTFTREEGDTDIHVHRIFGRKETLSVSTTGGGSVAD EEEECCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEEECCCEEEEEEECCCCCCHH DLGAFTWVDLSGEGDYLQGDSVALTAAPATGYVFTGWGGDCAGTSPVCTVTMDGAKNVTA HCCCEEEEEECCCCCEECCCCEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEE SFSLDRPAAPTGLSGVPGNGTAGISWTASQESGITGYKVYYGITSGNYATPDPVGTTPAH EEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHH VISGLMNGVTYYIAVSVLKNGVEGPKSAEITVTPGINLSVTVVGTGGGTVSSAPGGISCL HHHHHHHHHEEEHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCEEEE DGSGCSAVFNAAPVVLSATPSAGSIFAGWSGACSGTDGCTVTQYGPVAVTATFTKMPPVK CCCCCCCHHCCCCEEEEECCCCCEEEECCCCCCCCCCCCEEEECCCEEEEEEECCCCCEE LTAGTTSYYSTIAEAYAACIGGTSCTIETQATELAGNVTLANAIAVLFKGGYDATFSSSP EEECCHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCEEHHHEEEEEEECCCCCEECCCC GLTTLQGVVTVGRGSLTAQNVVIR CCEEEEEEEEECCCCEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA