| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997738
Identifier: 39997738
GI number: 39997738
Start: 2914617
End: 2915861
Strand: Reverse
Name: 39997738
Synonym: GSU2644
Alternate gene names: NA
Gene position: 2915861-2914617 (Counterclockwise)
Preceding gene: 39997739
Following gene: 39997737
Centisome position: 76.45
GC content: 61.69
Gene sequence:
>1245_bases ATGACCGCACAACTGATACTGTTCGCAGCCGTTCTTGCCGCACCCGCGGTCTGCCGTGCCGTTGATCTGGGGATCAGTTC CGATACCATTGTCAGGGTCTACGAACGGGATGACCGTAACGGCGGGGGGCGCTCCCTTCTGCCGGTCTACGAATTCGTGC GGCTCGATTACGGCAGCGTAACCACGCCGGGGCTGTCGCTCCACGCCTACGGCTGGGGGCGGCTCGACCTGCGGGATTCG CACGAGGACGGCGATGCCGAGGGCGATCTCCTCTATGCCTATCTTGAATATATCGACCCAGACCGCGATCATCAGATGCG GCTCGGCCGCCAATACCTTTTCGAAGGGGTGATGCGGGAGAGTTTCGACGGCCTCTATGCCAGAACGGAGCTCGTGCCGA CGGTAGCCCTCTCGGCATTCGCCGGAATGCCGGTCGGTGCGGGCAGCGCGGCGGGCCGCAGCGGCGACCTGGTCTACGGA GCCCGGATCGTTCAGGGACAGCGTGGTCGGTATGACGCGGGAATCTCTTACAAGTACGTGGCCAATGACGGCTCCCGGAG CGAGGAGCTTCTGGGGGCCGACCTCTCCCTGAGCCTGCCGGCCGGTATCTCGATGTTCGCTCATTCGACGCTCAATCTTC TGACGGGCGGGTGGGGAGAGCATTCCTACGAGGCCCGGATCCCGTTTGCGTCCATGGAGCTCCGCCCCTTTTACCAGCGG TATCGGTATTCCGACTATCTCAACGACCGTTCCGGGGCCTCACGACCGTTCCGTTTCCAGACGGTACTCGGTGACCGGGT TGAGATCGCGGGCGCCGAAGGATTCTGGTATCCGACCGAGAGCGTGGAGTTCGGTGGGAGGTACAAGTACCTCACCTATG ACAGCCGGTTCGGCAACGCCCACATGGCCACCGCCCTGGCGACGGTGCGGAGGGGTATTTTCTCGGAAGCCGGTCTGGAG TTCGGCCGCGTTCAGGGTGATCTGACAGAGAACCGCTACTATCTGGGGCGCGGTTATCTTTACGGCGATTTCGCTCCCTG GTTCGCTACCGGTGATGTTACCTATGTCCGCTACGACCGGGCCATCTACGGAGAGAACAGTGCGCTCTTCGTTTCCGCCG GCGTGGGAAGGAAGATGCTGGATCGGGCGCTTTCCCTCAAACTTTCGGTGGATTACAGCAATGACCCCTATTTCCACAAA GATTACCGCGGCACCCTTGCCGTGACCTATGCGTTTCGCAGGTAA
Upstream 100 bases:
>100_bases GACAGTCCGTTGTGATGCCCCCCTCCTCCGCCAGGATGGTCGGAGCGAGGGGGGCTGACATGCCCACGAGGAGGGGGATG CATTGACGCGTTCCTGGTGG
Downstream 100 bases:
>100_bases GAGCGTGATGGACCGGCCAGCGGCAAAGAAATGGAATCAGGCGCATGAATCGTAGAACCGTTTGCATGGCGGCGGGGTGC ATGCTTCTCGCCCTTGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MTAQLILFAAVLAAPAVCRAVDLGISSDTIVRVYERDDRNGGGRSLLPVYEFVRLDYGSVTTPGLSLHAYGWGRLDLRDS HEDGDAEGDLLYAYLEYIDPDRDHQMRLGRQYLFEGVMRESFDGLYARTELVPTVALSAFAGMPVGAGSAAGRSGDLVYG ARIVQGQRGRYDAGISYKYVANDGSRSEELLGADLSLSLPAGISMFAHSTLNLLTGGWGEHSYEARIPFASMELRPFYQR YRYSDYLNDRSGASRPFRFQTVLGDRVEIAGAEGFWYPTESVEFGGRYKYLTYDSRFGNAHMATALATVRRGIFSEAGLE FGRVQGDLTENRYYLGRGYLYGDFAPWFATGDVTYVRYDRAIYGENSALFVSAGVGRKMLDRALSLKLSVDYSNDPYFHK DYRGTLAVTYAFRR
Sequences:
>Translated_414_residues MTAQLILFAAVLAAPAVCRAVDLGISSDTIVRVYERDDRNGGGRSLLPVYEFVRLDYGSVTTPGLSLHAYGWGRLDLRDS HEDGDAEGDLLYAYLEYIDPDRDHQMRLGRQYLFEGVMRESFDGLYARTELVPTVALSAFAGMPVGAGSAAGRSGDLVYG ARIVQGQRGRYDAGISYKYVANDGSRSEELLGADLSLSLPAGISMFAHSTLNLLTGGWGEHSYEARIPFASMELRPFYQR YRYSDYLNDRSGASRPFRFQTVLGDRVEIAGAEGFWYPTESVEFGGRYKYLTYDSRFGNAHMATALATVRRGIFSEAGLE FGRVQGDLTENRYYLGRGYLYGDFAPWFATGDVTYVRYDRAIYGENSALFVSAGVGRKMLDRALSLKLSVDYSNDPYFHK DYRGTLAVTYAFRR >Mature_413_residues TAQLILFAAVLAAPAVCRAVDLGISSDTIVRVYERDDRNGGGRSLLPVYEFVRLDYGSVTTPGLSLHAYGWGRLDLRDSH EDGDAEGDLLYAYLEYIDPDRDHQMRLGRQYLFEGVMRESFDGLYARTELVPTVALSAFAGMPVGAGSAAGRSGDLVYGA RIVQGQRGRYDAGISYKYVANDGSRSEELLGADLSLSLPAGISMFAHSTLNLLTGGWGEHSYEARIPFASMELRPFYQRY RYSDYLNDRSGASRPFRFQTVLGDRVEIAGAEGFWYPTESVEFGGRYKYLTYDSRFGNAHMATALATVRRGIFSEAGLEF GRVQGDLTENRYYLGRGYLYGDFAPWFATGDVTYVRYDRAIYGENSALFVSAGVGRKMLDRALSLKLSVDYSNDPYFHKD YRGTLAVTYAFRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46173; Mature: 46042
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQLILFAAVLAAPAVCRAVDLGISSDTIVRVYERDDRNGGGRSLLPVYEFVRLDYGSV CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCC TTPGLSLHAYGWGRLDLRDSHEDGDAEGDLLYAYLEYIDPDRDHQMRLGRQYLFEGVMRE CCCCCEEEEECCEEEECCCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHH SFDGLYARTELVPTVALSAFAGMPVGAGSAAGRSGDLVYGARIVQGQRGRYDAGISYKYV HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEE ANDGSRSEELLGADLSLSLPAGISMFAHSTLNLLTGGWGEHSYEARIPFASMELRPFYQR ECCCCCCHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCEEECCEECCCHHHHHHH YRYSDYLNDRSGASRPFRFQTVLGDRVEIAGAEGFWYPTESVEFGGRYKYLTYDSRFGNA HHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCH HMATALATVRRGIFSEAGLEFGRVQGDLTENRYYLGRGYLYGDFAPWFATGDVTYVRYDR HHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEECCEEEECCCCEEECCCEEEEEEEE AIYGENSALFVSAGVGRKMLDRALSLKLSVDYSNDPYFHKDYRGTLAVTYAFRR EEECCCCEEEEECCCCHHHHHHHHEEEEEEECCCCCCEECCCCCEEEEEEEECC >Mature Secondary Structure TAQLILFAAVLAAPAVCRAVDLGISSDTIVRVYERDDRNGGGRSLLPVYEFVRLDYGSV CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCC TTPGLSLHAYGWGRLDLRDSHEDGDAEGDLLYAYLEYIDPDRDHQMRLGRQYLFEGVMRE CCCCCEEEEECCEEEECCCCCCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHH SFDGLYARTELVPTVALSAFAGMPVGAGSAAGRSGDLVYGARIVQGQRGRYDAGISYKYV HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEE ANDGSRSEELLGADLSLSLPAGISMFAHSTLNLLTGGWGEHSYEARIPFASMELRPFYQR ECCCCCCHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCEEECCEECCCHHHHHHH YRYSDYLNDRSGASRPFRFQTVLGDRVEIAGAEGFWYPTESVEFGGRYKYLTYDSRFGNA HHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCH HMATALATVRRGIFSEAGLEFGRVQGDLTENRYYLGRGYLYGDFAPWFATGDVTYVRYDR HHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEECCEEEECCCCEEECCCEEEEEEEE AIYGENSALFVSAGVGRKMLDRALSLKLSVDYSNDPYFHKDYRGTLAVTYAFRR EEECCCCEEEEECCCCHHHHHHHHEEEEEEECCCCCCEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA