| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997685
Identifier: 39997685
GI number: 39997685
Start: 2854449
End: 2855555
Strand: Reverse
Name: 39997685
Synonym: GSU2590
Alternate gene names: NA
Gene position: 2855555-2854449 (Counterclockwise)
Preceding gene: 39997687
Following gene: 39997681
Centisome position: 74.87
GC content: 40.29
Gene sequence:
>1107_bases ATGGCTGATGACAAGAAATGGAAGTTGGTAGAGAGAGTTGTCGCTGCGGCCTTTGATGAACCGAATGTGACTGTGCAGAA AAATGTGCGGCTACGATCCCTGCGTAGAAAGGGCGGAGCCGGTGGATTGCGCGAAATAGATGTCTTAATCACAGGAGAAT TAGTAGGACAAAAAGTTCATTTTGCTATCGAATGCAAAGATTACAAAAGAAAGGTCGACTCTCATCATATAGATGCTTTT ATAGGTAAACTGCAGGATGTAGGCCTAGCGACACAAACAAGTATTTTTGTTACAACTCGTGGGTATACTACTCAAGCGGT TGAACGTGCACATGAAGTTGGAATGAAAACGCTGGTGCTCAAGCATAATGAAGAAATAAATATCAAGACTGAAGTTCTGA ATGCACTACAGTCACATGTATTCATATTCTGCGCGATTACCGAGATAGAAGTAAAAACTGATGAAATTTTTGATATGAGT TCATTTGAGCATTTCAAGTTCTTTGACAAAAAAGGGACGTTCGTTGGCCTACTACCTGATTTCATCTGGGAGTCCTGGAT TAGAGGAACTCCTTCAGCTAATCTAGGCAAATACTCATACAGGGTTAATATCAGCGATGAGATCTGCTATCTGCAGGATG GCAAAAAGAACTGCATTAATTTCATCAGAGTAGACTATCAAGTTGGGGCGCTAGTTTTCCAATTTAAGGGGCAAGCAAAG CGCTACCATTTGTACAATGCTCATGAACAGAAAACAGAACTCTATAAAGTAAAGGCAGATTTTTCAACGTCCAAACCAAC TCCATTTGTTTTCCACGATGAAAGCACACTACTGAAATTCTTAAATGAACAGTGTGCAATAGCCAAGATTGAATTCCCTC GCATAAAGCTCCCCAAAATAGTAATGAACCAAGGTCTTTTATGGCCAATACCTATTAGGGTCTCGGAATATTTTAAAACA ATATCCCCCGAAGACGCGGCACAGGAAGTTCAAAAGCTCGCGGAAGGCCCAGACAATAATTTTTGGGAGTTTGACACCAT ATACAATGAAATCATGAAGAACATCGAAAATTTTCCAAATGTAAGGTTCACTTACCATCCCCTATAA
Upstream 100 bases:
>100_bases AAGGGGGGCCTTACATAGTATCCTGCGGCGACAGCGGTCTCCGCTGACGCTCCGCCGCTGGCGCCTTGAGACGTTGGAAG GCTAAAGGAAAAATCCTGAA
Downstream 100 bases:
>100_bases AATGAGGCACAGTGAGAATTGGCGAAAAAGTAAAGAGCACTTCCAACATGGGCGGCGGCACTCGGACTCCGCTACGCTAC GCCGGTGCGCCCCCGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MADDKKWKLVERVVAAAFDEPNVTVQKNVRLRSLRRKGGAGGLREIDVLITGELVGQKVHFAIECKDYKRKVDSHHIDAF IGKLQDVGLATQTSIFVTTRGYTTQAVERAHEVGMKTLVLKHNEEINIKTEVLNALQSHVFIFCAITEIEVKTDEIFDMS SFEHFKFFDKKGTFVGLLPDFIWESWIRGTPSANLGKYSYRVNISDEICYLQDGKKNCINFIRVDYQVGALVFQFKGQAK RYHLYNAHEQKTELYKVKADFSTSKPTPFVFHDESTLLKFLNEQCAIAKIEFPRIKLPKIVMNQGLLWPIPIRVSEYFKT ISPEDAAQEVQKLAEGPDNNFWEFDTIYNEIMKNIENFPNVRFTYHPL
Sequences:
>Translated_368_residues MADDKKWKLVERVVAAAFDEPNVTVQKNVRLRSLRRKGGAGGLREIDVLITGELVGQKVHFAIECKDYKRKVDSHHIDAF IGKLQDVGLATQTSIFVTTRGYTTQAVERAHEVGMKTLVLKHNEEINIKTEVLNALQSHVFIFCAITEIEVKTDEIFDMS SFEHFKFFDKKGTFVGLLPDFIWESWIRGTPSANLGKYSYRVNISDEICYLQDGKKNCINFIRVDYQVGALVFQFKGQAK RYHLYNAHEQKTELYKVKADFSTSKPTPFVFHDESTLLKFLNEQCAIAKIEFPRIKLPKIVMNQGLLWPIPIRVSEYFKT ISPEDAAQEVQKLAEGPDNNFWEFDTIYNEIMKNIENFPNVRFTYHPL >Mature_367_residues ADDKKWKLVERVVAAAFDEPNVTVQKNVRLRSLRRKGGAGGLREIDVLITGELVGQKVHFAIECKDYKRKVDSHHIDAFI GKLQDVGLATQTSIFVTTRGYTTQAVERAHEVGMKTLVLKHNEEINIKTEVLNALQSHVFIFCAITEIEVKTDEIFDMSS FEHFKFFDKKGTFVGLLPDFIWESWIRGTPSANLGKYSYRVNISDEICYLQDGKKNCINFIRVDYQVGALVFQFKGQAKR YHLYNAHEQKTELYKVKADFSTSKPTPFVFHDESTLLKFLNEQCAIAKIEFPRIKLPKIVMNQGLLWPIPIRVSEYFKTI SPEDAAQEVQKLAEGPDNNFWEFDTIYNEIMKNIENFPNVRFTYHPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42474; Mature: 42343
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDKKWKLVERVVAAAFDEPNVTVQKNVRLRSLRRKGGAGGLREIDVLITGELVGQKVH CCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEE FAIECKDYKRKVDSHHIDAFIGKLQDVGLATQTSIFVTTRGYTTQAVERAHEVGMKTLVL EEEEEHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHCCCEEEEE KHNEEINIKTEVLNALQSHVFIFCAITEIEVKTDEIFDMSSFEHFKFFDKKGTFVGLLPD ECCCCCEEHHHHHHHHHHCEEEEEEEEEEEECCCHHCCCCCCCHHEEECCCCCEEEECHH FIWESWIRGTPSANLGKYSYRVNISDEICYLQDGKKNCINFIRVDYQVGALVFQFKGQAK HHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHEEEEEEEEEEEEEECCCCE RYHLYNAHEQKTELYKVKADFSTSKPTPFVFHDESTLLKFLNEQCAIAKIEFPRIKLPKI EEEEECCCCCCCEEEEEEECCCCCCCCCEEEECHHHHHHHHCCCCEEEEEECCCCCCCHH VMNQGLLWPIPIRVSEYFKTISPEDAAQEVQKLAEGPDNNFWEFDTIYNEIMKNIENFPN HHCCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCC VRFTYHPL CEEEECCC >Mature Secondary Structure ADDKKWKLVERVVAAAFDEPNVTVQKNVRLRSLRRKGGAGGLREIDVLITGELVGQKVH CCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEE FAIECKDYKRKVDSHHIDAFIGKLQDVGLATQTSIFVTTRGYTTQAVERAHEVGMKTLVL EEEEEHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHCCCEEEEE KHNEEINIKTEVLNALQSHVFIFCAITEIEVKTDEIFDMSSFEHFKFFDKKGTFVGLLPD ECCCCCEEHHHHHHHHHHCEEEEEEEEEEEECCCHHCCCCCCCHHEEECCCCCEEEECHH FIWESWIRGTPSANLGKYSYRVNISDEICYLQDGKKNCINFIRVDYQVGALVFQFKGQAK HHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHEEEEEEEEEEEEEECCCCE RYHLYNAHEQKTELYKVKADFSTSKPTPFVFHDESTLLKFLNEQCAIAKIEFPRIKLPKI EEEEECCCCCCCEEEEEEECCCCCCCCCEEEECHHHHHHHHCCCCEEEEEECCCCCCCHH VMNQGLLWPIPIRVSEYFKTISPEDAAQEVQKLAEGPDNNFWEFDTIYNEIMKNIENFPN HHCCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCC VRFTYHPL CEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA