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The map label for this gene is 39997679

Identifier: 39997679

GI number: 39997679

Start: 2846785

End: 2848278

Strand: Reverse

Name: 39997679

Synonym: GSU2584

Alternate gene names: NA

Gene position: 2848278-2846785 (Counterclockwise)

Preceding gene: 39997680

Following gene: 39997678

Centisome position: 74.68

GC content: 69.01

Gene sequence:

>1494_bases
ATGCGTGTGACGGGCAGAGGGCTGAGGCTGTTCCTGGCCGGCGCGGCGCTCGTGGCGGGGGGCTGCGCCCACTACCCGGA
GAATCCCCGGCTGGCGGCCGTTTCAACGGAAGCGGGCTACCGCTACAGCGTGGTCAGGCCCCGGCCCACGGCGGACAAGC
CCTTTGTTCTGCTGGCGTTCTCGGGCGGCGGTACCCGTGCGGCAGCCTTTTCCTTCGGCCTCATGGAGGAGCTGAACAGG
GTCGAGTACGCCGGTCGGGACGGGGCCAGGCACCGGCTCCTGGACGACGTGGAGATCATCTCGTCGGTTTCCGGCGGGAG
CTTCACCTCGGCCTACTACGCGCTCTACCCGGACCGGTTCTTCGACGATTTTCCGGGTACGTTCCTCTACCGCGACATCC
AAGGCGGGCTCGTGCGGCGCCTGTTCAACCCCTACAACTGGTGGCGCCTGGCCTCGCCGGATTTCAGCCGGATCGACATG
GCGGAGGAGTACTACAACGACACGGTCTTCGGGGGCAAGACCTTTGCCGACCTGGTCGCCGCGCCCGGGAAGAGGGCGCC
CTTCCTGGTGCTGAACGCCACGGACATCAGCATCGCCCACCGGTTCGAGTTCACCCAGGACCAGTTCGACCTGCTCTGCT
CGGACCTGGCCGGGGTCTCGGTCGCCCGGGCCGTGGCCGCCTCGTCCAATTTCCCGGTGGCCTTTGCCCCGCTCACCCTG
ACCATCCACAAGGAGCCGTGCGGCCCACTTCCCGAATGGATCGGGCTGGGCCTGGACCGGGAGAGCAACCCGAAGCGCCG
CGTGGCCGACGCCGAGGCCGGCAGGTCGTACCGCGAGCCCGACCGGCTCTACGCCCACCTCCTGGACGGCGGCCTGTCGG
ACAACCTGGGGCTCAGGGGGCCGTTCCAGGCGGTGACCACCACCGACAGCGCGTGGAGCATCCTCCGCTACGCCAACCTG
AACCGGCTGGGGCGGCTGATGGTGATTGCGGCCAATGCCAAGACGACCAAGCAGCGGAGCTGGGACGCCAGGAGCGCGCC
GCCGGGGATCGACGCCGTCCTCGACGTGGCCCTGAACGGCCCCATGGACGACGTCTCCTTTGACAGCGTGGAGATGATAG
ACGGCCATTTCCAGCAGATGCGCCAGCTGGCCCGGACGGTGGATTCCTGCAACCGGCGGCTGGGGCAGGAGTGCCCGTCG
GCCCCGCCGATCCCGAACCCGATCGTGACCGAGTTCACCTTTGCCGAGCTGACCTTCGACGATATCCCTGACCCGCGCCT
GCGCCTCTGCCTGCAGGCGCTGCCCACGTCGTTCGCACTGCCGGCCAAGACCGTGGACCTGCTCCGCGCCGCGGCCGGGT
ACCTGCTGATGGGCTCGGCTGAATTCGTCGGCGGCATGCAACGGCTCGATTCCACCTGGCAGCCGCGCCCCGTGGCCATC
GACCCGGCGCTGGTGGACGAGGTCTGCGGACCGGCATCCGACGGGGGGAGCTGA

Upstream 100 bases:

>100_bases
TGGCGCTCCGCTGCCCTGCGGGCAAGACCTGCGTCCCGCTCAAGAGGACCGTGGTAATCAAAGACACCGACCCGGTGGCG
CCCCAGGAGGTGGCGTTCCA

Downstream 100 bases:

>100_bases
CAAGGAGGCGATCCGGCCCCTGCCGTATGATTTGGGCCGGGAGCGTCGCATCGGCCCGGTGATATACTTGAAGCAGGTGG
GGGCGGTTAGCGCCATCCGC

Product: lipoprotein

Products: NA

Alternate protein names: Patatin-Like Phospholipase Family Protein; Patatin-Like Phospholipase Domain-Containing Protein; Patatin-Like Phospholipase; Patatine; Signal Peptide; Phospholipase Patatin Family; Phospholipase; Lipoprotein

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MRVTGRGLRLFLAGAALVAGGCAHYPENPRLAAVSTEAGYRYSVVRPRPTADKPFVLLAFSGGGTRAAAFSFGLMEELNR
VEYAGRDGARHRLLDDVEIISSVSGGSFTSAYYALYPDRFFDDFPGTFLYRDIQGGLVRRLFNPYNWWRLASPDFSRIDM
AEEYYNDTVFGGKTFADLVAAPGKRAPFLVLNATDISIAHRFEFTQDQFDLLCSDLAGVSVARAVAASSNFPVAFAPLTL
TIHKEPCGPLPEWIGLGLDRESNPKRRVADAEAGRSYREPDRLYAHLLDGGLSDNLGLRGPFQAVTTTDSAWSILRYANL
NRLGRLMVIAANAKTTKQRSWDARSAPPGIDAVLDVALNGPMDDVSFDSVEMIDGHFQQMRQLARTVDSCNRRLGQECPS
APPIPNPIVTEFTFAELTFDDIPDPRLRLCLQALPTSFALPAKTVDLLRAAAGYLLMGSAEFVGGMQRLDSTWQPRPVAI
DPALVDEVCGPASDGGS

Sequences:

>Translated_497_residues
MRVTGRGLRLFLAGAALVAGGCAHYPENPRLAAVSTEAGYRYSVVRPRPTADKPFVLLAFSGGGTRAAAFSFGLMEELNR
VEYAGRDGARHRLLDDVEIISSVSGGSFTSAYYALYPDRFFDDFPGTFLYRDIQGGLVRRLFNPYNWWRLASPDFSRIDM
AEEYYNDTVFGGKTFADLVAAPGKRAPFLVLNATDISIAHRFEFTQDQFDLLCSDLAGVSVARAVAASSNFPVAFAPLTL
TIHKEPCGPLPEWIGLGLDRESNPKRRVADAEAGRSYREPDRLYAHLLDGGLSDNLGLRGPFQAVTTTDSAWSILRYANL
NRLGRLMVIAANAKTTKQRSWDARSAPPGIDAVLDVALNGPMDDVSFDSVEMIDGHFQQMRQLARTVDSCNRRLGQECPS
APPIPNPIVTEFTFAELTFDDIPDPRLRLCLQALPTSFALPAKTVDLLRAAAGYLLMGSAEFVGGMQRLDSTWQPRPVAI
DPALVDEVCGPASDGGS
>Mature_497_residues
MRVTGRGLRLFLAGAALVAGGCAHYPENPRLAAVSTEAGYRYSVVRPRPTADKPFVLLAFSGGGTRAAAFSFGLMEELNR
VEYAGRDGARHRLLDDVEIISSVSGGSFTSAYYALYPDRFFDDFPGTFLYRDIQGGLVRRLFNPYNWWRLASPDFSRIDM
AEEYYNDTVFGGKTFADLVAAPGKRAPFLVLNATDISIAHRFEFTQDQFDLLCSDLAGVSVARAVAASSNFPVAFAPLTL
TIHKEPCGPLPEWIGLGLDRESNPKRRVADAEAGRSYREPDRLYAHLLDGGLSDNLGLRGPFQAVTTTDSAWSILRYANL
NRLGRLMVIAANAKTTKQRSWDARSAPPGIDAVLDVALNGPMDDVSFDSVEMIDGHFQQMRQLARTVDSCNRRLGQECPS
APPIPNPIVTEFTFAELTFDDIPDPRLRLCLQALPTSFALPAKTVDLLRAAAGYLLMGSAEFVGGMQRLDSTWQPRPVAI
DPALVDEVCGPASDGGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54246; Mature: 54246

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTGRGLRLFLAGAALVAGGCAHYPENPRLAAVSTEAGYRYSVVRPRPTADKPFVLLAF
CCCCCCCCEEHHHHHHHHHCCHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEE
SGGGTRAAAFSFGLMEELNRVEYAGRDGARHRLLDDVEIISSVSGGSFTSAYYALYPDRF
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHH
FDDFPGTFLYRDIQGGLVRRLFNPYNWWRLASPDFSRIDMAEEYYNDTVFGGKTFADLVA
HHCCCCCEEEEHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHC
APGKRAPFLVLNATDISIAHRFEFTQDQFDLLCSDLAGVSVARAVAASSNFPVAFAPLTL
CCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE
TIHKEPCGPLPEWIGLGLDRESNPKRRVADAEAGRSYREPDRLYAHLLDGGLSDNLGLRG
EEECCCCCCCHHHHCCCCCCCCCCHHHHCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PFQAVTTTDSAWSILRYANLNRLGRLMVIAANAKTTKQRSWDARSAPPGIDAVLDVALNG
CCCEEEECCHHHHHHHHHCHHHCCEEEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHCC
PMDDVSFDSVEMIDGHFQQMRQLARTVDSCNRRLGQECPSAPPIPNPIVTEFTFAELTFD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC
DIPDPRLRLCLQALPTSFALPAKTVDLLRAAAGYLLMGSAEFVGGMQRLDSTWQPRPVAI
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEECCHHHHHHHHHHCCCCCCCCEEE
DPALVDEVCGPASDGGS
CHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRVTGRGLRLFLAGAALVAGGCAHYPENPRLAAVSTEAGYRYSVVRPRPTADKPFVLLAF
CCCCCCCCEEHHHHHHHHHCCHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEE
SGGGTRAAAFSFGLMEELNRVEYAGRDGARHRLLDDVEIISSVSGGSFTSAYYALYPDRF
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHH
FDDFPGTFLYRDIQGGLVRRLFNPYNWWRLASPDFSRIDMAEEYYNDTVFGGKTFADLVA
HHCCCCCEEEEHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHC
APGKRAPFLVLNATDISIAHRFEFTQDQFDLLCSDLAGVSVARAVAASSNFPVAFAPLTL
CCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE
TIHKEPCGPLPEWIGLGLDRESNPKRRVADAEAGRSYREPDRLYAHLLDGGLSDNLGLRG
EEECCCCCCCHHHHCCCCCCCCCCHHHHCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PFQAVTTTDSAWSILRYANLNRLGRLMVIAANAKTTKQRSWDARSAPPGIDAVLDVALNG
CCCEEEECCHHHHHHHHHCHHHCCEEEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHCC
PMDDVSFDSVEMIDGHFQQMRQLARTVDSCNRRLGQECPSAPPIPNPIVTEFTFAELTFD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC
DIPDPRLRLCLQALPTSFALPAKTVDLLRAAAGYLLMGSAEFVGGMQRLDSTWQPRPVAI
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEECCHHHHHHHHHHCCCCCCCCEEE
DPALVDEVCGPASDGGS
CHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA