Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39997628

Identifier: 39997628

GI number: 39997628

Start: 2795087

End: 2796298

Strand: Reverse

Name: 39997628

Synonym: GSU2533

Alternate gene names: NA

Gene position: 2796298-2795087 (Counterclockwise)

Preceding gene: 39997629

Following gene: 39997627

Centisome position: 73.31

GC content: 63.7

Gene sequence:

>1212_bases
ATGTCCATTGTTCGATTTTTCTGCGCGGCGCTGGCGGCCGTCACCGTGGCGGTCGCCGGCGATGCCCGCGCCTTGGACCT
GCTGGGCGAGAAACTCGCCCTGCACGGGTTCGCTTCCCAGGGCTACCTGGACAGCACCGGCAACAATTTCCTGGCCGATA
CCCGCGACGGGACCTTCCAGCTCAACGAGTTCGGGCTTACGCTCACTTCTCGCCTCACCGACCACCTCCATCTCGGCGCC
CAGCTGCTCTCCCGCGACTACGGCGACGTGGGCGACAACGAAATCCGGCTCGACTGGGCCCTGGCCGACTATCGCGTTCA
CGACCTGATCGGCGTGCGGGTAGGCAAGATCAAGCGTCCCATGGGGCTCTACAACGAGGGGCGCGACTCGGATTTTCTCC
GTCCCATGATATTTCTCCCCCAGAGCATTTACGACGAAACCCGTCGCGACATGCTCATCGCCTGCATCGGCGGCGGCCTT
TACGGCAACGTGCCCGCCGGCCCGCTGGGCGATTTCGACTACCAGTTTTTCAGAGGCTGGTTCGATTTTCCCGACGATTC
CGTCATCGCGCGAGCCACGCGGGCGAACGCCCAGACCTTTGCCACCCGCAAGGGGCTCGGCACCGTGACCGACGTGACCA
TGGACAACAAGTACGTGGTCGGCGCACAGCTCATCTTCAACACCTCCATCGACGGCCTGCGCGCGGCGGTATCCTGGCAG
CGCGGCCGCCACGACCTGACCCTGAACGGCGGAGCGCTCCCGCCGGGAGAGCTGGCCATCCGCGGCAAGTACGTCTACTC
CCTGGAATATGTGAACGGCCCCCTCACGCTGGCCAGTGAGTACGCCGAAACAGACCGCGAGCAGCGGCTCTTCGGCCAGC
TCACCATGGACGGCCGGACCCAGGAGTGGTACGTGATGGGAACCTGGGCCTTCAATGAACAGGTGAGTCTCTCGCTGCTC
TACGATGTGTTTTACAACGACAAGCACGATCACGACGGGAAGGCCTACCTCCGGCAGGGGCGGCCCGACTACCTGGGCTG
GCGCAAGGATTTCGGCGCCGGGCTCCGCTTCGACATCAACCCGTCGTGGACCGTCAAGGCCGAATGGCACCAGGTGGACG
GTGCTGCCCTGTACCTGGAACTCTACAACAGTCCGCAGGATATGAAGCGGCGCTGGGGCTACGGCGCCGTGAAGGTTTCA
TACAATTTCTGA

Upstream 100 bases:

>100_bases
AAAACCGTTTCGCCTTCGCGATGCACGATCCCTGCGCCGGGGCGGTAGACGCTGCGCCGCAGGCGTGTGCCGGATCCCCG
TGCTAGGGAGCTGCCGTCAT

Downstream 100 bases:

>100_bases
CACCCAACGGCGGTGGATGCGATGAGGTATTGTCTGGACGTCATCCTTGTGGTCCTGCTGGTTGCCGTCTCCGTTCCGGA
GGCGGCGCGAGCGGCCGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSIVRFFCAALAAVTVAVAGDARALDLLGEKLALHGFASQGYLDSTGNNFLADTRDGTFQLNEFGLTLTSRLTDHLHLGA
QLLSRDYGDVGDNEIRLDWALADYRVHDLIGVRVGKIKRPMGLYNEGRDSDFLRPMIFLPQSIYDETRRDMLIACIGGGL
YGNVPAGPLGDFDYQFFRGWFDFPDDSVIARATRANAQTFATRKGLGTVTDVTMDNKYVVGAQLIFNTSIDGLRAAVSWQ
RGRHDLTLNGGALPPGELAIRGKYVYSLEYVNGPLTLASEYAETDREQRLFGQLTMDGRTQEWYVMGTWAFNEQVSLSLL
YDVFYNDKHDHDGKAYLRQGRPDYLGWRKDFGAGLRFDINPSWTVKAEWHQVDGAALYLELYNSPQDMKRRWGYGAVKVS
YNF

Sequences:

>Translated_403_residues
MSIVRFFCAALAAVTVAVAGDARALDLLGEKLALHGFASQGYLDSTGNNFLADTRDGTFQLNEFGLTLTSRLTDHLHLGA
QLLSRDYGDVGDNEIRLDWALADYRVHDLIGVRVGKIKRPMGLYNEGRDSDFLRPMIFLPQSIYDETRRDMLIACIGGGL
YGNVPAGPLGDFDYQFFRGWFDFPDDSVIARATRANAQTFATRKGLGTVTDVTMDNKYVVGAQLIFNTSIDGLRAAVSWQ
RGRHDLTLNGGALPPGELAIRGKYVYSLEYVNGPLTLASEYAETDREQRLFGQLTMDGRTQEWYVMGTWAFNEQVSLSLL
YDVFYNDKHDHDGKAYLRQGRPDYLGWRKDFGAGLRFDINPSWTVKAEWHQVDGAALYLELYNSPQDMKRRWGYGAVKVS
YNF
>Mature_402_residues
SIVRFFCAALAAVTVAVAGDARALDLLGEKLALHGFASQGYLDSTGNNFLADTRDGTFQLNEFGLTLTSRLTDHLHLGAQ
LLSRDYGDVGDNEIRLDWALADYRVHDLIGVRVGKIKRPMGLYNEGRDSDFLRPMIFLPQSIYDETRRDMLIACIGGGLY
GNVPAGPLGDFDYQFFRGWFDFPDDSVIARATRANAQTFATRKGLGTVTDVTMDNKYVVGAQLIFNTSIDGLRAAVSWQR
GRHDLTLNGGALPPGELAIRGKYVYSLEYVNGPLTLASEYAETDREQRLFGQLTMDGRTQEWYVMGTWAFNEQVSLSLLY
DVFYNDKHDHDGKAYLRQGRPDYLGWRKDFGAGLRFDINPSWTVKAEWHQVDGAALYLELYNSPQDMKRRWGYGAVKVSY
NF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45296; Mature: 45165

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVRFFCAALAAVTVAVAGDARALDLLGEKLALHGFASQGYLDSTGNNFLADTRDGTFQ
CHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHEEECCCCCEECCCCCCEEEECCCCEEE
LNEFGLTLTSRLTDHLHLGAQLLSRDYGDVGDNEIRLDWALADYRVHDLIGVRVGKIKRP
EEECCEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECEEEEHHHHEEECCCCCC
MGLYNEGRDSDFLRPMIFLPQSIYDETRRDMLIACIGGGLYGNVPAGPLGDFDYQFFRGW
CCCCCCCCCCCCCCHHHHCCHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCHHHHHHC
FDFPDDSVIARATRANAQTFATRKGLGTVTDVTMDNKYVVGAQLIFNTSIDGLRAAVSWQ
CCCCCCHHEEHHHHCCCHHHHHHCCCCCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHH
RGRHDLTLNGGALPPGELAIRGKYVYSLEYVNGPLTLASEYAETDREQRLFGQLTMDGRT
CCCEEEEECCCCCCCCCEEEEEEEEEEEEEECCCEEEHHHHHHCCHHHHHHEEEEECCCC
QEWYVMGTWAFNEQVSLSLLYDVFYNDKHDHDGKAYLRQGRPDYLGWRKDFGAGLRFDIN
CEEEEEEEEEECCCEEHEEEEEHHCCCCCCCCCHHHHHCCCCCCCCCHHHCCCCCEEECC
PSWTVKAEWHQVDGAALYLELYNSPQDMKRRWGYGAVKVSYNF
CCEEEEEEEEECCCEEEEEEEECCCHHHHHHCCCEEEEEEECC
>Mature Secondary Structure 
SIVRFFCAALAAVTVAVAGDARALDLLGEKLALHGFASQGYLDSTGNNFLADTRDGTFQ
HHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHEEECCCCCEECCCCCCEEEECCCCEEE
LNEFGLTLTSRLTDHLHLGAQLLSRDYGDVGDNEIRLDWALADYRVHDLIGVRVGKIKRP
EEECCEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECEEEEHHHHEEECCCCCC
MGLYNEGRDSDFLRPMIFLPQSIYDETRRDMLIACIGGGLYGNVPAGPLGDFDYQFFRGW
CCCCCCCCCCCCCCHHHHCCHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCHHHHHHC
FDFPDDSVIARATRANAQTFATRKGLGTVTDVTMDNKYVVGAQLIFNTSIDGLRAAVSWQ
CCCCCCHHEEHHHHCCCHHHHHHCCCCCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHH
RGRHDLTLNGGALPPGELAIRGKYVYSLEYVNGPLTLASEYAETDREQRLFGQLTMDGRT
CCCEEEEECCCCCCCCCEEEEEEEEEEEEEECCCEEEHHHHHHCCHHHHHHEEEEECCCC
QEWYVMGTWAFNEQVSLSLLYDVFYNDKHDHDGKAYLRQGRPDYLGWRKDFGAGLRFDIN
CEEEEEEEEEECCCEEHEEEEEHHCCCCCCCCCHHHHHCCCCCCCCCHHHCCCCCEEECC
PSWTVKAEWHQVDGAALYLELYNSPQDMKRRWGYGAVKVSYNF
CCEEEEEEEEECCCEEEEEEEECCCHHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA