Click here to switch to the map view.

The map label for this gene is 39997556

Identifier: 39997556

GI number: 39997556

Start: 2699159

End: 2700013

Strand: Reverse

Name: 39997556

Synonym: GSU2461

Alternate gene names: NA

Gene position: 2700013-2699159 (Counterclockwise)

Preceding gene: 39997558

Following gene: 39997555

Centisome position: 70.79

GC content: 60.58

Gene sequence:

>855_bases
TTGCAAAAGCACGGGCCGTTGGCTATAGTTTACCGCACGTGGAAGCAGCAACGGCGGGGGCCGGGGGCTTGCGGCAGATG
GGCTCCCTTGCAATCCCCGTCCCGTGCACTATACTGTTTCCCATTAAGACCGTGGAGGGATCGACTTCATGAGCATTGGC
GCACTTGCCGTACTGGTAATGGCCTGCGCACTGGTTGTGCTGGTGGCGTTTCTCATTCCGACGCTGCTGGAGATCAGGAG
AACCGCGGCAGAGTTCAGGAGCGTCATGGCCCAGGTGGGGCAGGAGCTGAAGCCCCTCACCCAGGAACTCCAGCAGACCC
TTGCCGAACTGAAGGTCGTCACCGAGGGGGTTGCCGAGCGGGTGGACGACGTGAAGGAATTCATGGAAGCCGTGGGCGAC
ACCGGGCGCAACATCCGGACCATCAATGCCGTCATCGGCAGCGTGGCCCACGCGGCGGCGGCCTCCTCCGCCTGGAGCAC
CGGCGCCCGGGTGGCCGGAAAGTACCTCATGGAACGACTCATCAAGAAAAGGGGGTAATTCGTATGTCTGAAGAAAGAGG
AACGAGCGTCGGAACGGTATTCCTGTCATTCCTGGCCGGAGCCGCGGTGGGAGCGGGCCTGGGGCTTCTGCTCGCACCCA
AGACCGGCAAGGAGATGCGCGAAAACATCATGGATCTGACCGATGAGGCCCTCGACAAGATCAAGGGATTCACGAAAGAG
GCCCAGTCCAAGATCAAGGATACCTACGAGGAAACCAAGGACCTCATCACCGAGAAGAAGACCATCATCACCTCCGCCAT
CGAGGCGGGGAAGGAAGCCATGGACCGGGAGCGCGAGAAGTTCAAGGAGATGTAG

Upstream 100 bases:

>100_bases
TACTATTCTCTTTTGGTGAAGGATACGGAAGCCCCGGCCGGTTTGTCAATCGGATTTTGCCGCCAAGTTGCCGTATCTGC
GTAAACGGCGAGCAATTCGT

Downstream 100 bases:

>100_bases
CCACTCCCGGCGCCGCACGAACAAGCCCACCCCGCGTGGGCTTTTTCGTGTGCGCTCCGAAGGGCGGAGGCGCGGATGGA
GAAAGGGTCAAAGGGCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MQKHGPLAIVYRTWKQQRRGPGACGRWAPLQSPSRALYCFPLRPWRDRLHEHWRTCRTGNGLRTGCAGGVSHSDAAGDQE
NRGRVQERHGPGGAGAEAPHPGTPADPCRTEGRHRGGCRAGGRREGIHGSRGRHRAQHPDHQCRHRQRGPRGGGLLRLEH
RRPGGRKVPHGTTHQEKGVIRMSEERGTSVGTVFLSFLAGAAVGAGLGLLLAPKTGKEMRENIMDLTDEALDKIKGFTKE
AQSKIKDTYEETKDLITEKKTIITSAIEAGKEAMDREREKFKEM

Sequences:

>Translated_284_residues
MQKHGPLAIVYRTWKQQRRGPGACGRWAPLQSPSRALYCFPLRPWRDRLHEHWRTCRTGNGLRTGCAGGVSHSDAAGDQE
NRGRVQERHGPGGAGAEAPHPGTPADPCRTEGRHRGGCRAGGRREGIHGSRGRHRAQHPDHQCRHRQRGPRGGGLLRLEH
RRPGGRKVPHGTTHQEKGVIRMSEERGTSVGTVFLSFLAGAAVGAGLGLLLAPKTGKEMRENIMDLTDEALDKIKGFTKE
AQSKIKDTYEETKDLITEKKTIITSAIEAGKEAMDREREKFKEM
>Mature_284_residues
MQKHGPLAIVYRTWKQQRRGPGACGRWAPLQSPSRALYCFPLRPWRDRLHEHWRTCRTGNGLRTGCAGGVSHSDAAGDQE
NRGRVQERHGPGGAGAEAPHPGTPADPCRTEGRHRGGCRAGGRREGIHGSRGRHRAQHPDHQCRHRQRGPRGGGLLRLEH
RRPGGRKVPHGTTHQEKGVIRMSEERGTSVGTVFLSFLAGAAVGAGLGLLLAPKTGKEMRENIMDLTDEALDKIKGFTKE
AQSKIKDTYEETKDLITEKKTIITSAIEAGKEAMDREREKFKEM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31395; Mature: 31395

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKHGPLAIVYRTWKQQRRGPGACGRWAPLQSPSRALYCFPLRPWRDRLHEHWRTCRTGN
CCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCC
GLRTGCAGGVSHSDAAGDQENRGRVQERHGPGGAGAEAPHPGTPADPCRTEGRHRGGCRA
CCCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
GGRREGIHGSRGRHRAQHPDHQCRHRQRGPRGGGLLRLEHRRPGGRKVPHGTTHQEKGVI
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCE
RMSEERGTSVGTVFLSFLAGAAVGAGLGLLLAPKTGKEMRENIMDLTDEALDKIKGFTKE
EEHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQSKIKDTYEETKDLITEKKTIITSAIEAGKEAMDREREKFKEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKHGPLAIVYRTWKQQRRGPGACGRWAPLQSPSRALYCFPLRPWRDRLHEHWRTCRTGN
CCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCC
GLRTGCAGGVSHSDAAGDQENRGRVQERHGPGGAGAEAPHPGTPADPCRTEGRHRGGCRA
CCCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
GGRREGIHGSRGRHRAQHPDHQCRHRQRGPRGGGLLRLEHRRPGGRKVPHGTTHQEKGVI
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCE
RMSEERGTSVGTVFLSFLAGAAVGAGLGLLLAPKTGKEMRENIMDLTDEALDKIKGFTKE
EEHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQSKIKDTYEETKDLITEKKTIITSAIEAGKEAMDREREKFKEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA