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The map label for this gene is perM [H]

Identifier: 39997549

GI number: 39997549

Start: 2693681

End: 2694721

Strand: Reverse

Name: perM [H]

Synonym: GSU2454

Alternate gene names: 39997549

Gene position: 2694721-2693681 (Counterclockwise)

Preceding gene: 39997550

Following gene: 39997548

Centisome position: 70.65

GC content: 64.17

Gene sequence:

>1041_bases
ATGGCTGACAAACAACCGGCGGTGAACAGGGTCGTGGCGGCGCTGCTGGTGGGCGGGGCGCTGATCGCCGCAGGCTACGC
GATCAGGCATACGGTCTCCTGCTTCCTGCTGTCCTTCGTTACCGCCTATCTCCTGGACCCCGTCCTCGTTGTGATGGAGC
GCCGCGGCGTGCGCCGTCCGTGGGGCATCCTCTTCCTCTACGCGCTTCTCGCGGTTTTCTCCGTCTTCTTCTTCATCGTG
CTCGTGCCGTTTCTCAGCCTGCGCTGGGAGGCGTTCATCACCGGGCTCCCCGCCTATCTCCAGAAGGGGAAGCAGATCGT
GTTCGCCTGGAAGAGCCGGGCGGTCCCTCCCTATGCGGTGGAGGAGTGGCGCTGGCTCTTCGATACCGCCGCCGGCCAGG
CCGACAAGCTGCTGGCCAAGCTCGGCGCCGGGGTCTACGCCGCTGCCGAGGGGCTCGTCTTCAATCTGTTCAACCTGGTG
CTCGCGCCGATTCTCGTGTTCTTCATGCTCTGGTACAAGAAGGAGTTCATGGAGACAGCGGCGGCGTGGCTCCCCGCGTC
CCGCCGCGAGGTCTTGCTGGCCCTGGGGCGGGAGGTCAACGAGAGCATCGGCGGCTACATCCGCGGCCAGTTCATGGTTT
CGGTCATCGTGGCGGTCCTGTCCACGGTGGCGCTCTTCGTCATCGGCATCGACTATCCCATCGTCAACGGCATATTCGCG
GGACTCGCCTCGGTTCTCCCCTTCATCGGGGTCATCCTGGCAACCCTGCCGCCCCTGTTCTTCGCCTATGTCCAGTACGA
GAGCGGCATGGTGCTCCTCCAGGTGATCGGCGCCTTCTCGGTCATCTACTTTCTGGAAGGCTACCTGGTGAAGCCGCTGG
TCTTCAAGGAGTCCATGGACCTGAACCCCCTGGTGACCATCATCGTGGTCATGGTGTTCGGCGAACTCATGGGTTTCTGG
GGCATCCTGCTGGCCATTCCCATTGCCGCCGCCGTGCGTGCCGCCGCCGACCACCTCCGTCGCGGCGATTTCCGGAGCTA
G

Upstream 100 bases:

>100_bases
CCGACCGGGCCCGGCGGTGGCTGGAGGAGAACGATCTCTTCGGCGCCGAAGAGGAGGATTTCTGAGGGTGCCGCACGCCG
GCGCCCCACAGGAGCGGACG

Downstream 100 bases:

>100_bases
GCGGTGCGCCCCCGCGACGCGGCCCATATCGCCTGGTTCCTGGCCATAACCTTCGGGCTGGTGCTCCTGGCGGGCCATTT
CGCCGTCCACTCCCTGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MADKQPAVNRVVAALLVGGALIAAGYAIRHTVSCFLLSFVTAYLLDPVLVVMERRGVRRPWGILFLYALLAVFSVFFFIV
LVPFLSLRWEAFITGLPAYLQKGKQIVFAWKSRAVPPYAVEEWRWLFDTAAGQADKLLAKLGAGVYAAAEGLVFNLFNLV
LAPILVFFMLWYKKEFMETAAAWLPASRREVLLALGREVNESIGGYIRGQFMVSVIVAVLSTVALFVIGIDYPIVNGIFA
GLASVLPFIGVILATLPPLFFAYVQYESGMVLLQVIGAFSVIYFLEGYLVKPLVFKESMDLNPLVTIIVVMVFGELMGFW
GILLAIPIAAAVRAAADHLRRGDFRS

Sequences:

>Translated_346_residues
MADKQPAVNRVVAALLVGGALIAAGYAIRHTVSCFLLSFVTAYLLDPVLVVMERRGVRRPWGILFLYALLAVFSVFFFIV
LVPFLSLRWEAFITGLPAYLQKGKQIVFAWKSRAVPPYAVEEWRWLFDTAAGQADKLLAKLGAGVYAAAEGLVFNLFNLV
LAPILVFFMLWYKKEFMETAAAWLPASRREVLLALGREVNESIGGYIRGQFMVSVIVAVLSTVALFVIGIDYPIVNGIFA
GLASVLPFIGVILATLPPLFFAYVQYESGMVLLQVIGAFSVIYFLEGYLVKPLVFKESMDLNPLVTIIVVMVFGELMGFW
GILLAIPIAAAVRAAADHLRRGDFRS
>Mature_345_residues
ADKQPAVNRVVAALLVGGALIAAGYAIRHTVSCFLLSFVTAYLLDPVLVVMERRGVRRPWGILFLYALLAVFSVFFFIVL
VPFLSLRWEAFITGLPAYLQKGKQIVFAWKSRAVPPYAVEEWRWLFDTAAGQADKLLAKLGAGVYAAAEGLVFNLFNLVL
APILVFFMLWYKKEFMETAAAWLPASRREVLLALGREVNESIGGYIRGQFMVSVIVAVLSTVALFVIGIDYPIVNGIFAG
LASVLPFIGVILATLPPLFFAYVQYESGMVLLQVIGAFSVIYFLEGYLVKPLVFKESMDLNPLVTIIVVMVFGELMGFWG
ILLAIPIAAAVRAAADHLRRGDFRS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=306, Percent_Identity=27.4509803921569, Blast_Score=111, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38158; Mature: 38027

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKQPAVNRVVAALLVGGALIAAGYAIRHTVSCFLLSFVTAYLLDPVLVVMERRGVRRP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
WGILFLYALLAVFSVFFFIVLVPFLSLRWEAFITGLPAYLQKGKQIVFAWKSRAVPPYAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCCCCCHHH
EEWRWLFDTAAGQADKLLAKLGAGVYAAAEGLVFNLFNLVLAPILVFFMLWYKKEFMETA
HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAWLPASRREVLLALGREVNESIGGYIRGQFMVSVIVAVLSTVALFVIGIDYPIVNGIFA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GLASVLPFIGVILATLPPLFFAYVQYESGMVLLQVIGAFSVIYFLEGYLVKPLVFKESMD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LNPLVTIIVVMVFGELMGFWGILLAIPIAAAVRAAADHLRRGDFRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ADKQPAVNRVVAALLVGGALIAAGYAIRHTVSCFLLSFVTAYLLDPVLVVMERRGVRRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH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CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]