Click here to switch to the map view.

The map label for this gene is yfhR [H]

Identifier: 39997545

GI number: 39997545

Start: 2689027

End: 2689803

Strand: Reverse

Name: yfhR [H]

Synonym: GSU2450

Alternate gene names: 39997545

Gene position: 2689803-2689027 (Counterclockwise)

Preceding gene: 39997546

Following gene: 39997544

Centisome position: 70.52

GC content: 70.79

Gene sequence:

>777_bases
ATGATCTCGCGCCGCCTCCGTTTCCCCGGCGGCCGCGGCGCGGAACTCTCCGGCATCCTCGATCTGCCGGAGGGGCGGGA
GCCGGTCGCCTTCGCCCTCTTTGCCCACTGTTTCACCTGCTCCAAGGAGCTGAAATCCATGGTCGCCATCAACCGGGTGC
TCACGGAGCAGGGGATCGGCGTGCTCCGCTTCGACTTCACGGGGCTCGGGGAGAGCGGGGGGGACTTCAGCGAAACCGGT
TTCACCTCCACCGTGGACGATCTGCTGGCGGCCGCCTCGTTCCTGGAGCGCTCCCATGCCACGCCCAGCCTGCTCATCGG
CCATTCCCTCGGCGGCACCACCTGCCTTGCCGCGGCCGGAGCCATCAAGGGCTGCCGGGCGGTCGTGGTCATCGGCTCAC
CGGCGAGCCCGGCGGGGCTGCGCCACCTATTCACCGGCAAGGAGGACGAACTGGCGCAGAACGGCTCGGCCCAGGTCATG
GTGGCCGGCCGCCCCTTCCGACTCGGCCGCTCGTTCCTGGACGACGTGACCGGCGTCCGCCTTGATGGGGCCATCGCCAC
CCTCGGCGTGCCGCTCCTCATACTCCATGCCCCCGACGACCAGGTGGTGGGCTTCCACCACGCCGAGCGGATCTTCTCCC
TGGCCCCCCAGCCCAGGAGCCTGGTGGCCCTGGACCGGGCCGACCACCTGCTCCTGGCCGAGGAGGACGCCCGCTATGCC
GCCGGCATCATCGCCGCCTGGGCCGTCAGGTACCTGTCCCCCGACCCGGCCGGATAG

Upstream 100 bases:

>100_bases
TGGGGCACCTGTTCCCGGACGGCCCGGCCCCCACCGGCCGGCGCTACTGCATTAACTCGGCATCGCTCGTACTCGACCGG
GCCGGCGAGGGGGAGAAGGA

Downstream 100 bases:

>100_bases
GCCCGGCTGAGCATCCTGCCGGCCCGCGCCCCGCGCCGGTTCGGTTTGAAACCGCTTTCCCCTCTGTTATACTTATCCGC
GTCACTTCAACCAAGGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MISRRLRFPGGRGAELSGILDLPEGREPVAFALFAHCFTCSKELKSMVAINRVLTEQGIGVLRFDFTGLGESGGDFSETG
FTSTVDDLLAAASFLERSHATPSLLIGHSLGGTTCLAAAGAIKGCRAVVVIGSPASPAGLRHLFTGKEDELAQNGSAQVM
VAGRPFRLGRSFLDDVTGVRLDGAIATLGVPLLILHAPDDQVVGFHHAERIFSLAPQPRSLVALDRADHLLLAEEDARYA
AGIIAAWAVRYLSPDPAG

Sequences:

>Translated_258_residues
MISRRLRFPGGRGAELSGILDLPEGREPVAFALFAHCFTCSKELKSMVAINRVLTEQGIGVLRFDFTGLGESGGDFSETG
FTSTVDDLLAAASFLERSHATPSLLIGHSLGGTTCLAAAGAIKGCRAVVVIGSPASPAGLRHLFTGKEDELAQNGSAQVM
VAGRPFRLGRSFLDDVTGVRLDGAIATLGVPLLILHAPDDQVVGFHHAERIFSLAPQPRSLVALDRADHLLLAEEDARYA
AGIIAAWAVRYLSPDPAG
>Mature_258_residues
MISRRLRFPGGRGAELSGILDLPEGREPVAFALFAHCFTCSKELKSMVAINRVLTEQGIGVLRFDFTGLGESGGDFSETG
FTSTVDDLLAAASFLERSHATPSLLIGHSLGGTTCLAAAGAIKGCRAVVVIGSPASPAGLRHLFTGKEDELAQNGSAQVM
VAGRPFRLGRSFLDDVTGVRLDGAIATLGVPLLILHAPDDQVVGFHHAERIFSLAPQPRSLVALDRADHLLLAEEDARYA
AGIIAAWAVRYLSPDPAG

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serine esterase family [H]

Homologues:

Organism=Escherichia coli, GI226510965, Length=233, Percent_Identity=26.6094420600858, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 27140; Mature: 27140

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRRLRFPGGRGAELSGILDLPEGREPVAFALFAHCFTCSKELKSMVAINRVLTEQGIG
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VLRFDFTGLGESGGDFSETGFTSTVDDLLAAASFLERSHATPSLLIGHSLGGTTCLAAAG
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
AIKGCRAVVVIGSPASPAGLRHLFTGKEDELAQNGSAQVMVAGRPFRLGRSFLDDVTGVR
HHCCCEEEEEECCCCCCHHHHHHHCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCEE
LDGAIATLGVPLLILHAPDDQVVGFHHAERIFSLAPQPRSLVALDRADHLLLAEEDARYA
ECCHHHHCCCEEEEEECCCCCEECHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCHHH
AGIIAAWAVRYLSPDPAG
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MISRRLRFPGGRGAELSGILDLPEGREPVAFALFAHCFTCSKELKSMVAINRVLTEQGIG
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VLRFDFTGLGESGGDFSETGFTSTVDDLLAAASFLERSHATPSLLIGHSLGGTTCLAAAG
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
AIKGCRAVVVIGSPASPAGLRHLFTGKEDELAQNGSAQVMVAGRPFRLGRSFLDDVTGVR
HHCCCEEEEEECCCCCCHHHHHHHCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCEE
LDGAIATLGVPLLILHAPDDQVVGFHHAERIFSLAPQPRSLVALDRADHLLLAEEDARYA
ECCHHHHCCCEEEEEECCCCCEECHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCHHH
AGIIAAWAVRYLSPDPAG
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]