| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39997430
Identifier: 39997430
GI number: 39997430
Start: 2551117
End: 2553801
Strand: Reverse
Name: 39997430
Synonym: GSU2333
Alternate gene names: NA
Gene position: 2553801-2551117 (Counterclockwise)
Preceding gene: 39997432
Following gene: 39997417
Centisome position: 66.96
GC content: 62.23
Gene sequence:
>2685_bases ATGGCCAAAAACCGATTCCTTCTCATTATTGCCGCCGTGTTCGTGGTCTTGCCAGCCGCGCTGTCGCTGATCACCTTCTA CACCGACTGGCTCTTTTTCCGGGAAACCGGTTACACCCAGGTGTTCACGACGGCCCTGGCGGCAAAGGTCGGGGCCGGGC TCGCCTCAGGGCTCTTTATGTTTGCGTTCGCCATGGTCAATCTGTACTTCGCGAACCGGGCTTCCTTGCCTCACACCCCC CGTGGCGTGTTCTTCGAGGGGGGCAATGTCTACCGCCTCCAGCGCGACGAGATGGTGCAGATGGTGAAGCCCCTGAGCAT CCTGGCCGCCCTTGTTCTGTCGCTTCTTGCCGGCAGGTGGGGCGCCCTGCAGTGGCAGAACCTGCTCCTGTTCACGAACG GCGTCACGGTGGGCACCAGCGATCCGATAATGGGGAAGGATCTGGGGTTCTACCTGTTCAGCCTGCCGCTGCTGGAGCAT GTGAAGGGGTTTGTCGCCTTCACGGTGCTCGTCACCGGCATTATGGTGGGGGCGGTCTACTTTTTCCGCGGCGGCATCAT CCTGTCGGATCGGGGGGCCGATGTGGACGGCGCGGTGAGGCGTCACCTGGCCATTCTGCTGGGGATCTTCTCGCTCACGC TGGCCACGGGCTTTTACCTGGATGCCGTGCGGCTCCTCCTTGCCGGCGGCAACTCTTTCCACGGAGCCGGTTACGTGGAT GTCAACGCCCGGCTTCCGCTCTACCGGATTCTCACCCTGGCCACCCCCCTTGCCGGCGCCGTGGTGGCGTTCGGCCTCTG GAAGGGAGCATGGCGCCTGACACTGATCCCGCCGATCATCGTGGCCGCCGTCTACGGCATCGGCATCGTGGGATATCCGG CCATGCTGCAGAAGTTCAAGGTCGCCCCCAACGAACTGGCCCTGGAAACCCCCTACATCGCCAATTCCATCCGGTTCACC CGGCTCGGCTACGATCTGGACAAAATCAAAACCGTTCCCTTTGATGTGGAGCTCAATCTGTCGGCCGCCGACATCGCAAA GAACGACGCCACCATCAGGAACATCAGGCTGTGGGATCACGGCCCGCTCCTCAAGACCTACAGCCAGTTGCAGCAGATCA GGACCTATTACAAGTTTTTCGACGTGGACAACGACCGGTACCTGGTGAACGGCCAGTACACCCAGGTGATGCTCTCGCCG CGTGAGCTCTCCTACAACGATCTCCCCAGCAGAAACTGGATCAACGAACGGCTCATCTTCACCCACGGCAACGGTCTGGC CGTCGGTCCGGTCAGCAGGATCAGCAGGGAAGGGCTCCCGGAATTCTTCATCAAGGATATCCCGGCGGTCAGCCTGGCCG ACATCAGGGTGACGCGACCGGAAATCTACTATGGCGAGCTCTCCAACGACTATGTCATCGTCGGGACCAAAGTGCCGGAA TTCAGCTACCCGACCGCCACGGGCAACATCAATACGACTTACGGGGGCAAGGGTGGGGTGGCGCTGGACTCGATGCTGCG CAAGGCCCTGTTCGCCGCCCGGTTCAAAACGGAGAAAATCCTCCTTTCATCGGACATTACCGATCAGAGCCGCATCCTCT ACTACCGCACCGTGGGTGAGCGGGTCAAGACGGTGGCCCCCTTTATCCGGTTCGACGGCGACCCCTACCTGGTCGTGGCC GACAACGGCACCCTCAAATGGATCATCGACGGCTATACCCATTCGAGCCGGCTTCCCTATTCGAAGCCGCTCAGGGGCGG CATCAACTACATGAGAAACTCGGTGAAAGCGGTGGTCGACGCCTACGACGGCACCCTGGACTTCTATATCAGCGATCCGG ACGACGTCATGATCAAGGTCTACGCCCGGATCTTCCCGGGACTCTTCAAGCCACTGTCCGCCATGTCGGCCGACCTGCGG GGGCACATCCGCTACCCCCACCAGTTCCTCCAGGTCCAGGCGGCCATGTTCGCCACCTACCACATGACCGATCCCAAGGT CTTCTACAACCGGGAGAACCTCTGGGAGATCCCCGTACTGGGCGAAGCGCCCATGGAGCCCTACTACACGGTCATGAAGC TGCCGGGAGAAGCCAGGGAGGAGTACATCCTGCTCCTCCCCTTCACCCCCTCCAAGCGGGACAACCTGGCCGCTTGGCTC ACGGCCCGCTGCGACGGCGAGAACTACGGCAAGCTCCTGGCCTACACCTTCCCCCGGGACCGCCTGATCTACGGGCCGAA GCAGATCGACGCGCGGATCAATCAGGACTCGCACATTTCCCAGCAACTGACCCTCTGGAGCCAGCGCGGCTCCCAGGTCA TCCGGGGGAGCATGCTGGTGATCCCCATCGAACAGTCGCTGCTCTACGTGCAGCCCCTGTTCCTGGCCGCCGCGGACAAG GCGGGGCTGCCTGAACTGAGGCGGGTCATCGTTGCCTACGGTGATGAAGTGGTCATGGAGGAGAGCCTGGAACTGGCCCT GCAGCGGATCTTCGGCGGGAAACGGGCACCGGTTGCCGGCGTTGCGGCAGCCCCTGAGGACGGGAAGGCCTCAACGGGCG ATTTGGCCCGGGAAGCCATGAGCATCTTCGAGCGGGCCACCAACCTGCAGCGGCAGGGGGACTGGGCCGGCTACGGCGAG GAGTTGCGGAAGCTGCAGCAGGTATTGAAGCAGCTGGCCCGGTGA
Upstream 100 bases:
>100_bases TCAGTGATGCTGCGGCCATATCCTCCCGCGCCGGACGTCATTGCCGAACAGCCGGATCACGGCTCTGTTGCACATAGATA TCACCCAAGGGAGCTTGTTG
Downstream 100 bases:
>100_bases AGTCGGCGGGAGAATGACCTGAACAGGTGACGGCCACCACGCCGACGAAGCGGAACGCGGAGCGATGTGGCGCGGCGGCC GTCACCTGTTTACAATTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 894; Mature: 893
Protein sequence:
>894_residues MAKNRFLLIIAAVFVVLPAALSLITFYTDWLFFRETGYTQVFTTALAAKVGAGLASGLFMFAFAMVNLYFANRASLPHTP RGVFFEGGNVYRLQRDEMVQMVKPLSILAALVLSLLAGRWGALQWQNLLLFTNGVTVGTSDPIMGKDLGFYLFSLPLLEH VKGFVAFTVLVTGIMVGAVYFFRGGIILSDRGADVDGAVRRHLAILLGIFSLTLATGFYLDAVRLLLAGGNSFHGAGYVD VNARLPLYRILTLATPLAGAVVAFGLWKGAWRLTLIPPIIVAAVYGIGIVGYPAMLQKFKVAPNELALETPYIANSIRFT RLGYDLDKIKTVPFDVELNLSAADIAKNDATIRNIRLWDHGPLLKTYSQLQQIRTYYKFFDVDNDRYLVNGQYTQVMLSP RELSYNDLPSRNWINERLIFTHGNGLAVGPVSRISREGLPEFFIKDIPAVSLADIRVTRPEIYYGELSNDYVIVGTKVPE FSYPTATGNINTTYGGKGGVALDSMLRKALFAARFKTEKILLSSDITDQSRILYYRTVGERVKTVAPFIRFDGDPYLVVA DNGTLKWIIDGYTHSSRLPYSKPLRGGINYMRNSVKAVVDAYDGTLDFYISDPDDVMIKVYARIFPGLFKPLSAMSADLR GHIRYPHQFLQVQAAMFATYHMTDPKVFYNRENLWEIPVLGEAPMEPYYTVMKLPGEAREEYILLLPFTPSKRDNLAAWL TARCDGENYGKLLAYTFPRDRLIYGPKQIDARINQDSHISQQLTLWSQRGSQVIRGSMLVIPIEQSLLYVQPLFLAAADK AGLPELRRVIVAYGDEVVMEESLELALQRIFGGKRAPVAGVAAAPEDGKASTGDLAREAMSIFERATNLQRQGDWAGYGE ELRKLQQVLKQLAR
Sequences:
>Translated_894_residues MAKNRFLLIIAAVFVVLPAALSLITFYTDWLFFRETGYTQVFTTALAAKVGAGLASGLFMFAFAMVNLYFANRASLPHTP RGVFFEGGNVYRLQRDEMVQMVKPLSILAALVLSLLAGRWGALQWQNLLLFTNGVTVGTSDPIMGKDLGFYLFSLPLLEH VKGFVAFTVLVTGIMVGAVYFFRGGIILSDRGADVDGAVRRHLAILLGIFSLTLATGFYLDAVRLLLAGGNSFHGAGYVD VNARLPLYRILTLATPLAGAVVAFGLWKGAWRLTLIPPIIVAAVYGIGIVGYPAMLQKFKVAPNELALETPYIANSIRFT RLGYDLDKIKTVPFDVELNLSAADIAKNDATIRNIRLWDHGPLLKTYSQLQQIRTYYKFFDVDNDRYLVNGQYTQVMLSP RELSYNDLPSRNWINERLIFTHGNGLAVGPVSRISREGLPEFFIKDIPAVSLADIRVTRPEIYYGELSNDYVIVGTKVPE FSYPTATGNINTTYGGKGGVALDSMLRKALFAARFKTEKILLSSDITDQSRILYYRTVGERVKTVAPFIRFDGDPYLVVA DNGTLKWIIDGYTHSSRLPYSKPLRGGINYMRNSVKAVVDAYDGTLDFYISDPDDVMIKVYARIFPGLFKPLSAMSADLR GHIRYPHQFLQVQAAMFATYHMTDPKVFYNRENLWEIPVLGEAPMEPYYTVMKLPGEAREEYILLLPFTPSKRDNLAAWL TARCDGENYGKLLAYTFPRDRLIYGPKQIDARINQDSHISQQLTLWSQRGSQVIRGSMLVIPIEQSLLYVQPLFLAAADK AGLPELRRVIVAYGDEVVMEESLELALQRIFGGKRAPVAGVAAAPEDGKASTGDLAREAMSIFERATNLQRQGDWAGYGE ELRKLQQVLKQLAR >Mature_893_residues AKNRFLLIIAAVFVVLPAALSLITFYTDWLFFRETGYTQVFTTALAAKVGAGLASGLFMFAFAMVNLYFANRASLPHTPR GVFFEGGNVYRLQRDEMVQMVKPLSILAALVLSLLAGRWGALQWQNLLLFTNGVTVGTSDPIMGKDLGFYLFSLPLLEHV KGFVAFTVLVTGIMVGAVYFFRGGIILSDRGADVDGAVRRHLAILLGIFSLTLATGFYLDAVRLLLAGGNSFHGAGYVDV NARLPLYRILTLATPLAGAVVAFGLWKGAWRLTLIPPIIVAAVYGIGIVGYPAMLQKFKVAPNELALETPYIANSIRFTR LGYDLDKIKTVPFDVELNLSAADIAKNDATIRNIRLWDHGPLLKTYSQLQQIRTYYKFFDVDNDRYLVNGQYTQVMLSPR ELSYNDLPSRNWINERLIFTHGNGLAVGPVSRISREGLPEFFIKDIPAVSLADIRVTRPEIYYGELSNDYVIVGTKVPEF SYPTATGNINTTYGGKGGVALDSMLRKALFAARFKTEKILLSSDITDQSRILYYRTVGERVKTVAPFIRFDGDPYLVVAD NGTLKWIIDGYTHSSRLPYSKPLRGGINYMRNSVKAVVDAYDGTLDFYISDPDDVMIKVYARIFPGLFKPLSAMSADLRG HIRYPHQFLQVQAAMFATYHMTDPKVFYNRENLWEIPVLGEAPMEPYYTVMKLPGEAREEYILLLPFTPSKRDNLAAWLT ARCDGENYGKLLAYTFPRDRLIYGPKQIDARINQDSHISQQLTLWSQRGSQVIRGSMLVIPIEQSLLYVQPLFLAAADKA GLPELRRVIVAYGDEVVMEESLELALQRIFGGKRAPVAGVAAAPEDGKASTGDLAREAMSIFERATNLQRQGDWAGYGEE LRKLQQVLKQLAR
Specific function: Unknown
COG id: COG1615
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0182 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2333_GEOSL (Q74AM0)
Other databases:
- EMBL: AE017180 - RefSeq: NP_953381.1 - GeneID: 2685821 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU2333 - NMPDR: fig|243231.1.peg.2319 - TIGR: GSU2333 - HOGENOM: HBG538831 - OMA: AHLRYPE - ProtClustDB: CLSK828803 - BioCyc: GSUL243231:GSU_2333-MONOMER - HAMAP: MF_01600 - InterPro: IPR005372
Pfam domain/function: PF03699 UPF0182
EC number: NA
Molecular weight: Translated: 99718; Mature: 99587
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x102aa3d4)-; HASH(0x10723230)-; HASH(0x10725bec)-; HASH(0xb4c7d44)-; HASH(0x10342b74)-; HASH(0x107282e0)-; HASH(0xfd56a3c)-;
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNRFLLIIAAVFVVLPAALSLITFYTDWLFFRETGYTQVFTTALAAKVGAGLASGLFM CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCHHHHHHHH FAFAMVNLYFANRASLPHTPRGVFFEGGNVYRLQRDEMVQMVKPLSILAALVLSLLAGRW HHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCC GALQWQNLLLFTNGVTVGTSDPIMGKDLGFYLFSLPLLEHVKGFVAFTVLVTGIMVGAVY CCEEECCEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFRGGIILSDRGADVDGAVRRHLAILLGIFSLTLATGFYLDAVRLLLAGGNSFHGAGYVD HHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE VNARLPLYRILTLATPLAGAVVAFGLWKGAWRLTLIPPIIVAAVYGIGIVGYPAMLQKFK ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHC VAPNELALETPYIANSIRFTRLGYDLDKIKTVPFDVELNLSAADIAKNDATIRNIRLWDH CCCCHHEECCCCHHCCEEEEEECCCHHHHEECCEEEEECCCHHHHCCCCCEEEEEEEECC GPLLKTYSQLQQIRTYYKFFDVDNDRYLVNGQYTQVMLSPRELSYNDLPSRNWINERLIF CCHHHHHHHHHHHHHHHHHEECCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEE THGNGLAVGPVSRISREGLPEFFIKDIPAVSLADIRVTRPEIYYGELSNDYVIVGTKVPE ECCCCEEECCHHHHHHCCCHHHHHHCCCCCEEEEEEEECCEEEEEECCCCEEEEEECCCC FSYPTATGNINTTYGGKGGVALDSMLRKALFAARFKTEKILLSSDITDQSRILYYRTVGE CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEHHH RVKTVAPFIRFDGDPYLVVADNGTLKWIIDGYTHSSRLPYSKPLRGGINYMRNSVKAVVD HHHHHHHHEEECCCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AYDGTLDFYISDPDDVMIKVYARIFPGLFKPLSAMSADLRGHIRYPHQFLQVQAAMFATY HCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEE HMTDPKVFYNRENLWEIPVLGEAPMEPYYTVMKLPGEAREEYILLLPFTPSKRDNLAAWL ECCCCEEEECCCCEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEE TARCDGENYGKLLAYTFPRDRLIYGPKQIDARINQDSHISQQLTLWSQRGSQVIRGSMLV EEECCCCCCCCEEEEECCCCCEEECCHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCCEEE IPIEQSLLYVQPLFLAAADKAGLPELRRVIVAYGDEVVMEESLELALQRIFGGKRAPVAG EEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC VAAAPEDGKASTGDLAREAMSIFERATNLQRQGDWAGYGEELRKLQQVLKQLAR EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCH >Mature Secondary Structure AKNRFLLIIAAVFVVLPAALSLITFYTDWLFFRETGYTQVFTTALAAKVGAGLASGLFM CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCHHHHHHHH FAFAMVNLYFANRASLPHTPRGVFFEGGNVYRLQRDEMVQMVKPLSILAALVLSLLAGRW HHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCC GALQWQNLLLFTNGVTVGTSDPIMGKDLGFYLFSLPLLEHVKGFVAFTVLVTGIMVGAVY CCEEECCEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFRGGIILSDRGADVDGAVRRHLAILLGIFSLTLATGFYLDAVRLLLAGGNSFHGAGYVD HHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE VNARLPLYRILTLATPLAGAVVAFGLWKGAWRLTLIPPIIVAAVYGIGIVGYPAMLQKFK ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHC VAPNELALETPYIANSIRFTRLGYDLDKIKTVPFDVELNLSAADIAKNDATIRNIRLWDH CCCCHHEECCCCHHCCEEEEEECCCHHHHEECCEEEEECCCHHHHCCCCCEEEEEEEECC GPLLKTYSQLQQIRTYYKFFDVDNDRYLVNGQYTQVMLSPRELSYNDLPSRNWINERLIF CCHHHHHHHHHHHHHHHHHEECCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEE THGNGLAVGPVSRISREGLPEFFIKDIPAVSLADIRVTRPEIYYGELSNDYVIVGTKVPE ECCCCEEECCHHHHHHCCCHHHHHHCCCCCEEEEEEEECCEEEEEECCCCEEEEEECCCC FSYPTATGNINTTYGGKGGVALDSMLRKALFAARFKTEKILLSSDITDQSRILYYRTVGE CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEHHH RVKTVAPFIRFDGDPYLVVADNGTLKWIIDGYTHSSRLPYSKPLRGGINYMRNSVKAVVD HHHHHHHHEEECCCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AYDGTLDFYISDPDDVMIKVYARIFPGLFKPLSAMSADLRGHIRYPHQFLQVQAAMFATY HCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEE HMTDPKVFYNRENLWEIPVLGEAPMEPYYTVMKLPGEAREEYILLLPFTPSKRDNLAAWL ECCCCEEEECCCCEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEE TARCDGENYGKLLAYTFPRDRLIYGPKQIDARINQDSHISQQLTLWSQRGSQVIRGSMLV EEECCCCCCCCEEEEECCCCCEEECCHHHHCCCCCCCHHHHHHHHHHHCCCHHHCCCEEE IPIEQSLLYVQPLFLAAADKAGLPELRRVIVAYGDEVVMEESLELALQRIFGGKRAPVAG EEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC VAAAPEDGKASTGDLAREAMSIFERATNLQRQGDWAGYGEELRKLQQVLKQLAR EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA