| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is fbP-2 [H]
Identifier: 39997372
GI number: 39997372
Start: 2491287
End: 2491703
Strand: Reverse
Name: fbP-2 [H]
Synonym: GSU2274
Alternate gene names: 39997372
Gene position: 2491703-2491287 (Counterclockwise)
Preceding gene: 39997373
Following gene: 39997370
Centisome position: 65.33
GC content: 67.39
Gene sequence:
>417_bases GTGGCGGCCTGTTCGGACAGGGAAACCAAGCCGGCCGGCGAGGCGAAGCCTGCAAGCGCCGCCGGCGCCTCGGATGCCGT CACGACTGCTTCGGGGCTTTCCTACGTGGACCTTGCCGCCGGGTCCGGTGCGGCCCCCGTGGCCGGTAAACCGGTGAAGG TTCACTACACGGGCTGGCTTGAGAACGGCACGAAGTTCGACAGCTCCGTGGACCGGGGAGAGCCGTTCGTCTTCACCATC GGCGCGGGCGAGGTGATCCCGGGATGGGACGAGGGGGTCATGTCCATGAAGGTCGGCGGCAAGCGCCGTCTCATCGTACC CCCCCAACTCGGGTACGGTGCCGCCGGAGCCGGCGGGGTGATCCCGCCGAATGCAACTCTGATTTTCGAGGTGGAACTGC TCGACGTTGCCACGTGA
Upstream 100 bases:
>100_bases CGGAATCCATGAGCCGTTCAATCTGTAAGCTATTTCGGAGGAATTGGTGAGAAACGTCGAGAAAATTCTCGTACTGCTGC TGCTCCTGGTCGGGATCGTC
Downstream 100 bases:
>100_bases TTGCGTGCTACGCCAAGGAGGGCGGATGCGACTCACGCTTTATGTAATCGGTTTTCTGCTGGCTGCCGTGCCGGCCATGG CCGGCAGCACTGTCACCTAC
Product: FKBP-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MAACSDRETKPAGEAKPASAAGASDAVTTASGLSYVDLAAGSGAAPVAGKPVKVHYTGWLENGTKFDSSVDRGEPFVFTI GAGEVIPGWDEGVMSMKVGGKRRLIVPPQLGYGAAGAGGVIPPNATLIFEVELLDVAT
Sequences:
>Translated_138_residues MAACSDRETKPAGEAKPASAAGASDAVTTASGLSYVDLAAGSGAAPVAGKPVKVHYTGWLENGTKFDSSVDRGEPFVFTI GAGEVIPGWDEGVMSMKVGGKRRLIVPPQLGYGAAGAGGVIPPNATLIFEVELLDVAT >Mature_137_residues AACSDRETKPAGEAKPASAAGASDAVTTASGLSYVDLAAGSGAAPVAGKPVKVHYTGWLENGTKFDSSVDRGEPFVFTIG AGEVIPGWDEGVMSMKVGGKRRLIVPPQLGYGAAGAGGVIPPNATLIFEVELLDVAT
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasm And Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Homo sapiens, GI4503729, Length=136, Percent_Identity=42.6470588235294, Blast_Score=109, Evalue=7e-25, Organism=Homo sapiens, GI4758380, Length=106, Percent_Identity=50.9433962264151, Blast_Score=108, Evalue=1e-24, Organism=Homo sapiens, GI17149836, Length=106, Percent_Identity=50, Blast_Score=108, Evalue=1e-24, Organism=Homo sapiens, GI4503725, Length=106, Percent_Identity=50, Blast_Score=108, Evalue=1e-24, Organism=Homo sapiens, GI224809331, Length=135, Percent_Identity=43.7037037037037, Blast_Score=108, Evalue=2e-24, Organism=Homo sapiens, GI206725530, Length=88, Percent_Identity=54.5454545454545, Blast_Score=106, Evalue=6e-24, Organism=Homo sapiens, GI17149844, Length=88, Percent_Identity=54.5454545454545, Blast_Score=106, Evalue=6e-24, Organism=Homo sapiens, GI17149842, Length=88, Percent_Identity=54.5454545454545, Blast_Score=106, Evalue=6e-24, Organism=Homo sapiens, GI224809329, Length=134, Percent_Identity=44.0298507462687, Blast_Score=105, Evalue=9e-24, Organism=Homo sapiens, GI224809327, Length=134, Percent_Identity=44.0298507462687, Blast_Score=105, Evalue=9e-24, Organism=Homo sapiens, GI4758384, Length=134, Percent_Identity=44.0298507462687, Blast_Score=105, Evalue=9e-24, Organism=Homo sapiens, GI192448443, Length=88, Percent_Identity=54.5454545454545, Blast_Score=97, Evalue=3e-21, Organism=Homo sapiens, GI8923659, Length=93, Percent_Identity=47.3118279569892, Blast_Score=87, Evalue=6e-18, Organism=Homo sapiens, GI33469985, Length=88, Percent_Identity=47.7272727272727, Blast_Score=86, Evalue=1e-17, Organism=Homo sapiens, GI4503727, Length=99, Percent_Identity=42.4242424242424, Blast_Score=83, Evalue=7e-17, Organism=Homo sapiens, GI206725547, Length=93, Percent_Identity=43.010752688172, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI150010552, Length=102, Percent_Identity=40.1960784313725, Blast_Score=73, Evalue=6e-14, Organism=Homo sapiens, GI31317231, Length=94, Percent_Identity=43.6170212765958, Blast_Score=73, Evalue=8e-14, Organism=Homo sapiens, GI7706131, Length=86, Percent_Identity=39.5348837209302, Blast_Score=72, Evalue=1e-13, Organism=Homo sapiens, GI206725544, Length=98, Percent_Identity=38.7755102040816, Blast_Score=70, Evalue=5e-13, Organism=Homo sapiens, GI146229346, Length=98, Percent_Identity=38.7755102040816, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI87082390, Length=109, Percent_Identity=51.3761467889908, Blast_Score=105, Evalue=8e-25, Organism=Escherichia coli, GI1789745, Length=109, Percent_Identity=51.3761467889908, Blast_Score=100, Evalue=7e-23, Organism=Caenorhabditis elegans, GI71993519, Length=93, Percent_Identity=56.989247311828, Blast_Score=103, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17540882, Length=88, Percent_Identity=52.2727272727273, Blast_Score=101, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17561782, Length=90, Percent_Identity=55.5555555555556, Blast_Score=98, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17561778, Length=86, Percent_Identity=41.8604651162791, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71993555, Length=64, Percent_Identity=51.5625, Blast_Score=69, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17506167, Length=86, Percent_Identity=37.2093023255814, Blast_Score=66, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17561780, Length=86, Percent_Identity=40.6976744186046, Blast_Score=65, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17506169, Length=86, Percent_Identity=37.2093023255814, Blast_Score=65, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6324194, Length=100, Percent_Identity=56, Blast_Score=109, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6320727, Length=91, Percent_Identity=58.2417582417582, Blast_Score=105, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6323482, Length=103, Percent_Identity=43.6893203883495, Blast_Score=83, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323566, Length=107, Percent_Identity=42.0560747663551, Blast_Score=79, Evalue=2e-16, Organism=Drosophila melanogaster, GI281363946, Length=89, Percent_Identity=59.5505617977528, Blast_Score=124, Evalue=2e-29, Organism=Drosophila melanogaster, GI17352457, Length=89, Percent_Identity=59.5505617977528, Blast_Score=124, Evalue=2e-29, Organism=Drosophila melanogaster, GI24655568, Length=106, Percent_Identity=57.5471698113208, Blast_Score=120, Evalue=2e-28, Organism=Drosophila melanogaster, GI24647110, Length=119, Percent_Identity=48.7394957983193, Blast_Score=105, Evalue=9e-24, Organism=Drosophila melanogaster, GI24583150, Length=98, Percent_Identity=51.0204081632653, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI21356629, Length=89, Percent_Identity=57.3033707865169, Blast_Score=94, Evalue=3e-20,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 13876; Mature: 13745
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAACSDRETKPAGEAKPASAAGASDAVTTASGLSYVDLAAGSGAAPVAGKPVKVHYTGWL CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEE ENGTKFDSSVDRGEPFVFTIGAGEVIPGWDEGVMSMKVGGKRRLIVPPQLGYGAAGAGGV CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCC IPPNATLIFEVELLDVAT CCCCCEEEEEEEEEEECC >Mature Secondary Structure AACSDRETKPAGEAKPASAAGASDAVTTASGLSYVDLAAGSGAAPVAGKPVKVHYTGWL CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEE ENGTKFDSSVDRGEPFVFTIGAGEVIPGWDEGVMSMKVGGKRRLIVPPQLGYGAAGAGGV CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCC IPPNATLIFEVELLDVAT CCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]