| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997284
Identifier: 39997284
GI number: 39997284
Start: 2395548
End: 2396717
Strand: Reverse
Name: 39997284
Synonym: GSU2186
Alternate gene names: NA
Gene position: 2396717-2395548 (Counterclockwise)
Preceding gene: 39997285
Following gene: 39997283
Centisome position: 62.84
GC content: 69.23
Gene sequence:
>1170_bases ATGGGCGCTCCCGCCAGGTTTCTGGTTGCAGGTATCGTCCTGATCGCCTTGGCGGTCGGGCTGGCACTGGTTCTCCGGCA GCAGCGGCCCGAACCGGCGCCGGCCCGGCTCTCCGTGGCGCGGGCACTGGGCGGCGCTTCTCCCGATGGCTTTCTCCGGG CACTGGAGCCACGTCGCTTCAGCTTTCCCGACGATCACGGCCCCCATGACGGCTTTCGCAACGAGTGGTGGTACTTCACC GGCAATCTGGCCGATGCCGAGGGCCGATCGTTCGGGTACCAGCTCACCTTTTTCCGGGTGGCGCTCCGGCCCCGGCCCGT GGCGCGGGACTCGCGCTGGGGTGCCGGAGAGGTCTGGATGGCCCACCTCGCCCTCACCGACGTGGCGGGCAGGCGTTTCC GGCATGCCGAGCGCCTGAGCCGTGAAGCACTGGGGCTCGCCGGTGCCGGCGGCCGCCCCCTGCGCGTATGGCTCGAAGAC TGGCAGGCCGTGGAAGTGGCGGCCCGCCCCTGGGCCGTGCGGCTCACGGGCAACGGGGGAGACTGGGGGATCGACCTGAC CCTGCGGGCCGTGAAGCCAGAGGTCCTCAACGGGGCAGGGGGGCTCAGCCGGAAGGGGGGGGAGCCGGGCAACGCCTCCT ATTACTATTCGCTGCCCCGCATGGAGACATCCGGCACCGTTCGTGCCGGCGGCACGACTTTCACCGTCTCGGGTCTTTCC TGGCTCGACCGGGAGTGGAGTACCAGTGCCCTCGCCCCGGACCAGGCCGGCTGGGACTGGTTAGCCCTCCACCTGAACGA CGGCCGCGATCTCATGTACTATCGACTCCGGCGTCGGGACGGGACCACCGACCCGGCCAGCGCCGGCACCATTGTGGCCG CCGACGGCTCCTACCGGCACCTGGCGGCCGCTGCCGCAACACTCGAAACCCTGTCCTGGTGGGCCAGCCCTGCGGGTGGA GCCCGCTACCCCTCGCGCTGGCGCCTGCGCATCCCTGCCGAGGGGATTGATCTGGACATTGTGCCGCGCCTGCCGGATCA GGAACTGTTCACCACCGTCCGCTACTGGGAAGGTGCCGTGGAGGTGCGAAGCAACACCGGTAAAGGGATTGCCGGGTCAG GTTATGTTGAGCTCACCGGCTACGGGGATCAAGATGTGTCGGCGAATTGA
Upstream 100 bases:
>100_bases ATCGTGCTGGCGGTCGGCGCCGCGATCGTGGCGGGGATCGTGCCCGCCCTGGCTACCGCTCGCGTCCCCCCGGCCCTTGC CTTCAAGGAGAATGAGTAGC
Downstream 100 bases:
>100_bases CGCAAAAATGGCATTTTCGGGAAAAAAATTTTTGGGCCGTGTCATTTTTTTCTAAAGATTTTTTGGAGGCATGCCGATAT AGTAATCAAAAGCATGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MGAPARFLVAGIVLIALAVGLALVLRQQRPEPAPARLSVARALGGASPDGFLRALEPRRFSFPDDHGPHDGFRNEWWYFT GNLADAEGRSFGYQLTFFRVALRPRPVARDSRWGAGEVWMAHLALTDVAGRRFRHAERLSREALGLAGAGGRPLRVWLED WQAVEVAARPWAVRLTGNGGDWGIDLTLRAVKPEVLNGAGGLSRKGGEPGNASYYYSLPRMETSGTVRAGGTTFTVSGLS WLDREWSTSALAPDQAGWDWLALHLNDGRDLMYYRLRRRDGTTDPASAGTIVAADGSYRHLAAAAATLETLSWWASPAGG ARYPSRWRLRIPAEGIDLDIVPRLPDQELFTTVRYWEGAVEVRSNTGKGIAGSGYVELTGYGDQDVSAN
Sequences:
>Translated_389_residues MGAPARFLVAGIVLIALAVGLALVLRQQRPEPAPARLSVARALGGASPDGFLRALEPRRFSFPDDHGPHDGFRNEWWYFT GNLADAEGRSFGYQLTFFRVALRPRPVARDSRWGAGEVWMAHLALTDVAGRRFRHAERLSREALGLAGAGGRPLRVWLED WQAVEVAARPWAVRLTGNGGDWGIDLTLRAVKPEVLNGAGGLSRKGGEPGNASYYYSLPRMETSGTVRAGGTTFTVSGLS WLDREWSTSALAPDQAGWDWLALHLNDGRDLMYYRLRRRDGTTDPASAGTIVAADGSYRHLAAAAATLETLSWWASPAGG ARYPSRWRLRIPAEGIDLDIVPRLPDQELFTTVRYWEGAVEVRSNTGKGIAGSGYVELTGYGDQDVSAN >Mature_388_residues GAPARFLVAGIVLIALAVGLALVLRQQRPEPAPARLSVARALGGASPDGFLRALEPRRFSFPDDHGPHDGFRNEWWYFTG NLADAEGRSFGYQLTFFRVALRPRPVARDSRWGAGEVWMAHLALTDVAGRRFRHAERLSREALGLAGAGGRPLRVWLEDW QAVEVAARPWAVRLTGNGGDWGIDLTLRAVKPEVLNGAGGLSRKGGEPGNASYYYSLPRMETSGTVRAGGTTFTVSGLSW LDREWSTSALAPDQAGWDWLALHLNDGRDLMYYRLRRRDGTTDPASAGTIVAADGSYRHLAAAAATLETLSWWASPAGGA RYPSRWRLRIPAEGIDLDIVPRLPDQELFTTVRYWEGAVEVRSNTGKGIAGSGYVELTGYGDQDVSAN
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42413; Mature: 42282
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPARFLVAGIVLIALAVGLALVLRQQRPEPAPARLSVARALGGASPDGFLRALEPRRF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHEECCCCCC SFPDDHGPHDGFRNEWWYFTGNLADAEGRSFGYQLTFFRVALRPRPVARDSRWGAGEVWM CCCCCCCCCCCCCCCCEEEECCEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHH AHLALTDVAGRRFRHAERLSREALGLAGAGGRPLRVWLEDWQAVEVAARPWAVRLTGNGG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCEEEEEECCCC DWGIDLTLRAVKPEVLNGAGGLSRKGGEPGNASYYYSLPRMETSGTVRAGGTTFTVSGLS CEEEEEEEEEECCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEECCCH WLDREWSTSALAPDQAGWDWLALHLNDGRDLMYYRLRRRDGTTDPASAGTIVAADGSYRH HHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCHH LAAAAATLETLSWWASPAGGARYPSRWRLRIPAEGIDLDIVPRLPDQELFTTVRYWEGAV HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHCCEE EVRSNTGKGIAGSGYVELTGYGDQDVSAN EEECCCCCCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure GAPARFLVAGIVLIALAVGLALVLRQQRPEPAPARLSVARALGGASPDGFLRALEPRRF CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHEECCCCCC SFPDDHGPHDGFRNEWWYFTGNLADAEGRSFGYQLTFFRVALRPRPVARDSRWGAGEVWM CCCCCCCCCCCCCCCCEEEECCEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHH AHLALTDVAGRRFRHAERLSREALGLAGAGGRPLRVWLEDWQAVEVAARPWAVRLTGNGG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCEEEEEECCCC DWGIDLTLRAVKPEVLNGAGGLSRKGGEPGNASYYYSLPRMETSGTVRAGGTTFTVSGLS CEEEEEEEEEECCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCEEEECCCH WLDREWSTSALAPDQAGWDWLALHLNDGRDLMYYRLRRRDGTTDPASAGTIVAADGSYRH HHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCHH LAAAAATLETLSWWASPAGGARYPSRWRLRIPAEGIDLDIVPRLPDQELFTTVRYWEGAV HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHCCEE EVRSNTGKGIAGSGYVELTGYGDQDVSAN EEECCCCCCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA