| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997204
Identifier: 39997204
GI number: 39997204
Start: 2318612
End: 2321209
Strand: Reverse
Name: 39997204
Synonym: GSU2106
Alternate gene names: NA
Gene position: 2321209-2318612 (Counterclockwise)
Preceding gene: 39997205
Following gene: 39997203
Centisome position: 60.86
GC content: 56.7
Gene sequence:
>2598_bases ATGGGTAAGGTTTCCGACAAGGTTTGTGAATTGCTGAACCGCCAAGTCAAAGAGCGGGGGATCGTCGTCTGGTACGACTC GGAGAAGGTCTATGACGGCTTGGCAAAACGCCTGCAAATTCCGGAGACGACCGTACTGTGTTATGAAAATGGCTTCTTCC CCTTACGGGAGCGGATGGAGCAGTTCCTGGAGTTCGTCACCGAAGACGGCCGCCCCCAGGACGATTGCGGCGTGCCACCC AAGCTGATTGTCTATGTCCCGAAGTCACGGAGTGAAACAGGTTTTGCCCTCATCGAGGCTGAATCGGTCGGAGCGGTGGT TGAGCCTGGCGCGCCGACAGCGGATCGTAATTCGCGGCTTTCTAGCCTGGTTGAACAGGTCTTCAACGGAGTAGCCCCGG AAAAGGCGGCCCATGTGGCACGCCAGACCGAAGAAGGTTTGCTGACACTTGCGGAACTCGACCAGATGGCCGAGGAGGCG GGTACAGTAACCACCGGGGCACTCAAACTCATATTCGGCGCAGCATCGCCGGTGGATGTGATCCTTTCCTTCTTGGCCGG GAATGAGTTCGATGTGAAGCTTGAGAAAAAGCACAGCCTAAGCGAGCTGGCTGTCGTGGCCCGCGAAGAGCTTGGGCTGG ATGTCGAGCTGATACCAACGGCGACGGAACTGCGAACGGCCATCCGCCGGCATCTGCTCCTGTGCGAGTTGATCCAGGGA CTACCGGAAGAGGGTTTTCCTCCCTCGTTATCTACCATTGCTCTCCCCCGGAAACCAGTCCAGTTCGACACGATCCGTCA TGTTCTGAATGTCTGGCGGCAGCGCCTGGATCTCCAAGAAGCCTACCGCGAGACTGCCGAAAACGTCCAGGCAATGACGC AGCTGGATAAGGCGGTTTTTCCAACAGAAGCGCTTCGTGGTCTCGAAACATTTCCCTTCATCGAATACCGTCTGTTGCTG TCCGCAAGAAACAACTTGGCCCAGAGGGACACAGACTCGCCGCTGGCTCTGGCCAAGGAGCGCAGAGCCTCTTTCTGGAG CCGTGTCTATCCCGAAATCAGTCTGCGTTGGTCCCTCGTTGAGGTGGCGGCCAGGCTGCTCCAAGTATCAGGCTTGATTT GCGATGCTCTGAAACGGCGCAAATTTACTGCCGAAGAACTGATAACGGCTTATACGCGTCATGGTGAGCCGTGGATGCTC TTGGATCGTTATGCGCGTCACCTGGAAAGCCGCTATGTCCGCTGCGAAACCTTCGGTTCTACTGATGATGCTGGCATGGA TGAATTGATGCACCAATGCCGGGTCGAGTATGCGAACACCCTGGCGGTGCTGGCGGAAGCGTACAGCGGGGCATTGGAGA GGGAAGGATTTACCCCTGCGGGATTCGACCAACAGTCACAAACATTCAGGAATGCCGTGGCGCCGCTCCTCAAAGATGGT GGCAAAGTGGCCTATTTTCTGGTTGACGCCCTACGGTACGAAATGGCCGATGAACTCTGCGAGGGCCTGAGTGCGGATTT TACGGTACATCTCGAACCGGCACTGGGGCAGTTGCCCGGCATAACTTCCGTGGGAATGGCAGCCCTTCTTCCCGCAGCTG AGAACGGGCTCGCGCTCGAAGCTGTCGGGGGGCGGATGCGCGTCTGTGTACAGGGAGAGACGGTGAATGATCGTTCGGCC CGCGTGACCTGGTTTCAGGAGAAAAGTGATTCACCGACCAAGGTATTCAAGCTCGGCGATATTGTGCGCTTGACGCCGAA ACGGAAAAGGGAGCTGGCAGAGGCACAACTGGTCATCGTGACCTCTCAGGAGATCGACCGGCATGGTGAAGAGGGGGGGG AAGATGAGGAAACCCGTCTCTACATGGACGAGGTGCTCGAAAAGTTGCGCCGGGGACTGCGTAACCTTGTCCAGGCGGGG ATAATGGAACTTGTCATTGCCGCAGACCATGGCTTCATCTTTGCCGAAGCGCTTGAATCTGGGCTGAAGATGGATCCGCC GGGCGGCAAAACGATAGCTCTTCATGACCGGGTCTGGATCGGACAGGGTGGCGTTGCTGCGGATGGCTTCTTCCGGGTCA ATGCAAGCGACCTTGAGCTGGGCGGTCCCCTTGAGCTGGCATTTCCCAAGGGCCTGGGAATCTTCAAGGTCCCGGGTGGC GGTTGCTCGTATTTCCACGGCGGCGCGTCCTTGCAGGAGCAGATCATCCCGGTGTGCCGGCTGACGGCGAAGGCTCCAAA ACGATCTGCTGTTATCACGGTTAATCTGAAACTTCAACTGGCCAAACCCAAGATCACGAATCGCTTCTTCTCAGTCACAG TGAGTCTGGAGGCGGAAGGGCTTTTCACGGACGTGGCGAAACGGGTCCGTCTGGAAATTCTTTCCGGCAAGGATGAGGTT GGTCATACGGCTATGGCTGCCTATGGATTTGAGGAAGGCTCGCGGGAGATAGTTGTGGACTATGGGAAGCCCAATTCCGT CACGATTATGATCTCAGAAACCAAAAAGCTTGAGCATATCGAAATCCGTGCCGTTGATTGTGAGTCCCAGCTGCTGCTTG CCTCATTGACTGGAGTGCCGGTCGAACTGGCAATATAG
Upstream 100 bases:
>100_bases ACAGGCCATGGACCATTGGCCCGAACGGGTACGGGAAAAGTGCAAGACGAACAAGTCATTCGCCATCGCCCACGGGCTGG CGTAAGCCGAGGCAGAGAGC
Downstream 100 bases:
>100_bases GAGTTACCATGAACGATGTTCTAGACCAGAAGCTGGTCGATGTATTCTCCGGCAAGGTGGTGCGCAAGGACCTGGTGCGC AAGGTCAAGGTCGGGGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Alkaline Phosphatase Domain-Containing Protein; PglZ Domain-Containing Protein; Pglz Domain Protein
Number of amino acids: Translated: 865; Mature: 864
Protein sequence:
>865_residues MGKVSDKVCELLNRQVKERGIVVWYDSEKVYDGLAKRLQIPETTVLCYENGFFPLRERMEQFLEFVTEDGRPQDDCGVPP KLIVYVPKSRSETGFALIEAESVGAVVEPGAPTADRNSRLSSLVEQVFNGVAPEKAAHVARQTEEGLLTLAELDQMAEEA GTVTTGALKLIFGAASPVDVILSFLAGNEFDVKLEKKHSLSELAVVAREELGLDVELIPTATELRTAIRRHLLLCELIQG LPEEGFPPSLSTIALPRKPVQFDTIRHVLNVWRQRLDLQEAYRETAENVQAMTQLDKAVFPTEALRGLETFPFIEYRLLL SARNNLAQRDTDSPLALAKERRASFWSRVYPEISLRWSLVEVAARLLQVSGLICDALKRRKFTAEELITAYTRHGEPWML LDRYARHLESRYVRCETFGSTDDAGMDELMHQCRVEYANTLAVLAEAYSGALEREGFTPAGFDQQSQTFRNAVAPLLKDG GKVAYFLVDALRYEMADELCEGLSADFTVHLEPALGQLPGITSVGMAALLPAAENGLALEAVGGRMRVCVQGETVNDRSA RVTWFQEKSDSPTKVFKLGDIVRLTPKRKRELAEAQLVIVTSQEIDRHGEEGGEDEETRLYMDEVLEKLRRGLRNLVQAG IMELVIAADHGFIFAEALESGLKMDPPGGKTIALHDRVWIGQGGVAADGFFRVNASDLELGGPLELAFPKGLGIFKVPGG GCSYFHGGASLQEQIIPVCRLTAKAPKRSAVITVNLKLQLAKPKITNRFFSVTVSLEAEGLFTDVAKRVRLEILSGKDEV GHTAMAAYGFEEGSREIVVDYGKPNSVTIMISETKKLEHIEIRAVDCESQLLLASLTGVPVELAI
Sequences:
>Translated_865_residues MGKVSDKVCELLNRQVKERGIVVWYDSEKVYDGLAKRLQIPETTVLCYENGFFPLRERMEQFLEFVTEDGRPQDDCGVPP KLIVYVPKSRSETGFALIEAESVGAVVEPGAPTADRNSRLSSLVEQVFNGVAPEKAAHVARQTEEGLLTLAELDQMAEEA GTVTTGALKLIFGAASPVDVILSFLAGNEFDVKLEKKHSLSELAVVAREELGLDVELIPTATELRTAIRRHLLLCELIQG LPEEGFPPSLSTIALPRKPVQFDTIRHVLNVWRQRLDLQEAYRETAENVQAMTQLDKAVFPTEALRGLETFPFIEYRLLL SARNNLAQRDTDSPLALAKERRASFWSRVYPEISLRWSLVEVAARLLQVSGLICDALKRRKFTAEELITAYTRHGEPWML LDRYARHLESRYVRCETFGSTDDAGMDELMHQCRVEYANTLAVLAEAYSGALEREGFTPAGFDQQSQTFRNAVAPLLKDG GKVAYFLVDALRYEMADELCEGLSADFTVHLEPALGQLPGITSVGMAALLPAAENGLALEAVGGRMRVCVQGETVNDRSA RVTWFQEKSDSPTKVFKLGDIVRLTPKRKRELAEAQLVIVTSQEIDRHGEEGGEDEETRLYMDEVLEKLRRGLRNLVQAG IMELVIAADHGFIFAEALESGLKMDPPGGKTIALHDRVWIGQGGVAADGFFRVNASDLELGGPLELAFPKGLGIFKVPGG GCSYFHGGASLQEQIIPVCRLTAKAPKRSAVITVNLKLQLAKPKITNRFFSVTVSLEAEGLFTDVAKRVRLEILSGKDEV GHTAMAAYGFEEGSREIVVDYGKPNSVTIMISETKKLEHIEIRAVDCESQLLLASLTGVPVELAI >Mature_864_residues GKVSDKVCELLNRQVKERGIVVWYDSEKVYDGLAKRLQIPETTVLCYENGFFPLRERMEQFLEFVTEDGRPQDDCGVPPK LIVYVPKSRSETGFALIEAESVGAVVEPGAPTADRNSRLSSLVEQVFNGVAPEKAAHVARQTEEGLLTLAELDQMAEEAG TVTTGALKLIFGAASPVDVILSFLAGNEFDVKLEKKHSLSELAVVAREELGLDVELIPTATELRTAIRRHLLLCELIQGL PEEGFPPSLSTIALPRKPVQFDTIRHVLNVWRQRLDLQEAYRETAENVQAMTQLDKAVFPTEALRGLETFPFIEYRLLLS ARNNLAQRDTDSPLALAKERRASFWSRVYPEISLRWSLVEVAARLLQVSGLICDALKRRKFTAEELITAYTRHGEPWMLL DRYARHLESRYVRCETFGSTDDAGMDELMHQCRVEYANTLAVLAEAYSGALEREGFTPAGFDQQSQTFRNAVAPLLKDGG KVAYFLVDALRYEMADELCEGLSADFTVHLEPALGQLPGITSVGMAALLPAAENGLALEAVGGRMRVCVQGETVNDRSAR VTWFQEKSDSPTKVFKLGDIVRLTPKRKRELAEAQLVIVTSQEIDRHGEEGGEDEETRLYMDEVLEKLRRGLRNLVQAGI MELVIAADHGFIFAEALESGLKMDPPGGKTIALHDRVWIGQGGVAADGFFRVNASDLELGGPLELAFPKGLGIFKVPGGG CSYFHGGASLQEQIIPVCRLTAKAPKRSAVITVNLKLQLAKPKITNRFFSVTVSLEAEGLFTDVAKRVRLEILSGKDEVG HTAMAAYGFEEGSREIVVDYGKPNSVTIMISETKKLEHIEIRAVDCESQLLLASLTGVPVELAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95500; Mature: 95368
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVSDKVCELLNRQVKERGIVVWYDSEKVYDGLAKRLQIPETTVLCYENGFFPLRERME CCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHH QFLEFVTEDGRPQDDCGVPPKLIVYVPKSRSETGFALIEAESVGAVVEPGAPTADRNSRL HHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEECCCCCCCCCHHHH SSLVEQVFNGVAPEKAAHVARQTEEGLLTLAELDQMAEEAGTVTTGALKLIFGAASPVDV HHHHHHHHCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCEEHHHHHHHHCCCCHHHH ILSFLAGNEFDVKLEKKHSLSELAVVAREELGLDVELIPTATELRTAIRRHLLLCELIQG HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHC LPEEGFPPSLSTIALPRKPVQFDTIRHVLNVWRQRLDLQEAYRETAENVQAMTQLDKAVF CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PTEALRGLETFPFIEYRLLLSARNNLAQRDTDSPLALAKERRASFWSRVYPEISLRWSLV CHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHH EVAARLLQVSGLICDALKRRKFTAEELITAYTRHGEPWMLLDRYARHLESRYVRCETFGS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCEEEEEECCC TDDAGMDELMHQCRVEYANTLAVLAEAYSGALEREGFTPAGFDQQSQTFRNAVAPLLKDG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC GKVAYFLVDALRYEMADELCEGLSADFTVHLEPALGQLPGITSVGMAALLPAAENGLALE CCEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHCCCCCCHHHHHHHHCCCCCCCEEEE AVGGRMRVCVQGETVNDRSARVTWFQEKSDSPTKVFKLGDIVRLTPKRKRELAEAQLVIV ECCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHEEECCCEEECCCHHHHHHHHCEEEEE TSQEIDRHGEEGGEDEETRLYMDEVLEKLRRGLRNLVQAGIMELVIAADHGFIFAEALES ECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHC GLKMDPPGGKTIALHDRVWIGQGGVAADGFFRVNASDLELGGPLELAFPKGLGIFKVPGG CCEECCCCCCEEEEECEEEECCCCCEECCEEEECCCCCCCCCCEEEECCCCCCEEECCCC GCSYFHGGASLQEQIIPVCRLTAKAPKRSAVITVNLKLQLAKPKITNRFFSVTVSLEAEG CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECCH LFTDVAKRVRLEILSGKDEVGHTAMAAYGFEEGSREIVVDYGKPNSVTIMISETKKLEHI HHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCEEE EIRAVDCESQLLLASLTGVPVELAI EEEEECCCCHHHHHHHCCCCEEEEC >Mature Secondary Structure GKVSDKVCELLNRQVKERGIVVWYDSEKVYDGLAKRLQIPETTVLCYENGFFPLRERME CCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHH QFLEFVTEDGRPQDDCGVPPKLIVYVPKSRSETGFALIEAESVGAVVEPGAPTADRNSRL HHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEECCCCCCCCCHHHH SSLVEQVFNGVAPEKAAHVARQTEEGLLTLAELDQMAEEAGTVTTGALKLIFGAASPVDV HHHHHHHHCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCEEHHHHHHHHCCCCHHHH ILSFLAGNEFDVKLEKKHSLSELAVVAREELGLDVELIPTATELRTAIRRHLLLCELIQG HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHC LPEEGFPPSLSTIALPRKPVQFDTIRHVLNVWRQRLDLQEAYRETAENVQAMTQLDKAVF CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PTEALRGLETFPFIEYRLLLSARNNLAQRDTDSPLALAKERRASFWSRVYPEISLRWSLV CHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHH EVAARLLQVSGLICDALKRRKFTAEELITAYTRHGEPWMLLDRYARHLESRYVRCETFGS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCEEEEEECCC TDDAGMDELMHQCRVEYANTLAVLAEAYSGALEREGFTPAGFDQQSQTFRNAVAPLLKDG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC GKVAYFLVDALRYEMADELCEGLSADFTVHLEPALGQLPGITSVGMAALLPAAENGLALE CCEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHCCCCCCHHHHHHHHCCCCCCCEEEE AVGGRMRVCVQGETVNDRSARVTWFQEKSDSPTKVFKLGDIVRLTPKRKRELAEAQLVIV ECCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHEEECCCEEECCCHHHHHHHHCEEEEE TSQEIDRHGEEGGEDEETRLYMDEVLEKLRRGLRNLVQAGIMELVIAADHGFIFAEALES ECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHC GLKMDPPGGKTIALHDRVWIGQGGVAADGFFRVNASDLELGGPLELAFPKGLGIFKVPGG CCEECCCCCCEEEEECEEEECCCCCEECCEEEECCCCCCCCCCEEEECCCCCCEEECCCC GCSYFHGGASLQEQIIPVCRLTAKAPKRSAVITVNLKLQLAKPKITNRFFSVTVSLEAEG CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECCH LFTDVAKRVRLEILSGKDEVGHTAMAAYGFEEGSREIVVDYGKPNSVTIMISETKKLEHI HHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCEEE EIRAVDCESQLLLASLTGVPVELAI EEEEECCCCHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA