Click here to switch to the map view.

The map label for this gene is 39997131

Identifier: 39997131

GI number: 39997131

Start: 2225471

End: 2225845

Strand: Reverse

Name: 39997131

Synonym: GSU2033

Alternate gene names: NA

Gene position: 2225845-2225471 (Counterclockwise)

Preceding gene: 39997132

Following gene: 39997130

Centisome position: 58.36

GC content: 44.8

Gene sequence:

>375_bases
ATGACCACCGTGAAATTATCCTCAAGTTTTCCTGTTGTTCCGCCGATAGATACACTATTGATGTCAATTTCGCATAAAAG
ATTTCAATTTGTTTCAAGTGTAACTAATTACTTGACTTTAGATTCAATTCCGGTAGATTTCGCGTTGAATCATACAATTT
TTCGGGACAATGCAATGAAATACCGAAACAACGTGAAGAAGATCAGGGAAGAACGGCTCATGAGCAAGGCCGAACTGGCA
CGGCTCGCGGGCGTCTCCCCGGCAACCATAGAGAGAATCGAGCGCGGCGAGGAGTGCCGCATGGAAACCAAGAGAAAGAT
TCTGCTTGCTCTTGGTTTTTCATTGTCCGAAAAGGACGCGGTGTTTATCGACTGA

Upstream 100 bases:

>100_bases
GTCTCACCGAGACAGCCGGGTTGCCGAAATATCACCACCGTGATAGTCGGCCCCGGCTTTTCTTTTGCCCGGGTCCGATG
CCGGAGCGAGGCAGCGACGC

Downstream 100 bases:

>100_bases
TCTCGGACGGGATGGGGCGTATGCTTTTCTCCAAAAAGAAAGAAATCGTCGGCATCGATATCGGCTCCAGCTCCGTGAAG
CTCGTTCAGCTCAAGGAGCA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTTVKLSSSFPVVPPIDTLLMSISHKRFQFVSSVTNYLTLDSIPVDFALNHTIFRDNAMKYRNNVKKIREERLMSKAELA
RLAGVSPATIERIERGEECRMETKRKILLALGFSLSEKDAVFID

Sequences:

>Translated_124_residues
MTTVKLSSSFPVVPPIDTLLMSISHKRFQFVSSVTNYLTLDSIPVDFALNHTIFRDNAMKYRNNVKKIREERLMSKAELA
RLAGVSPATIERIERGEECRMETKRKILLALGFSLSEKDAVFID
>Mature_123_residues
TTVKLSSSFPVVPPIDTLLMSISHKRFQFVSSVTNYLTLDSIPVDFALNHTIFRDNAMKYRNNVKKIREERLMSKAELAR
LAGVSPATIERIERGEECRMETKRKILLALGFSLSEKDAVFID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14136; Mature: 14004

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVKLSSSFPVVPPIDTLLMSISHKRFQFVSSVTNYLTLDSIPVDFALNHTIFRDNAMK
CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHCCCHHH
YRNNVKKIREERLMSKAELARLAGVSPATIERIERGEECRMETKRKILLALGFSLSEKDA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCE
VFID
EEEC
>Mature Secondary Structure 
TTVKLSSSFPVVPPIDTLLMSISHKRFQFVSSVTNYLTLDSIPVDFALNHTIFRDNAMK
CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHCCCHHH
YRNNVKKIREERLMSKAELARLAGVSPATIERIERGEECRMETKRKILLALGFSLSEKDA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCE
VFID
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA