| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is aroK
Identifier: 39997124
GI number: 39997124
Start: 2218198
End: 2218725
Strand: Reverse
Name: aroK
Synonym: GSU2026
Alternate gene names: 39997124
Gene position: 2218725-2218198 (Counterclockwise)
Preceding gene: 39997125
Following gene: 39997123
Centisome position: 58.17
GC content: 60.8
Gene sequence:
>528_bases ATGTCCGTGCCTTCTGACGGGCGCAACGTGGTCCTGACCGGTTTCATGGGAACCGGCAAGAGCACGGTGGGAAAGCTCCT GGCAAGGCGCCTCGGCTACCGCTTCAGTGACCTGGATGCGTTGATCGTGGAGCGGGCCGGCATCTCCATCAACGAGATAT TCGAGCGGTATGGGGAACAACGATTCCGTGAGCTGGAAACGGAAGCGATTCGTTCCCTTGGTGGCGTTTCCGGCCGGGTG GTGGCCACCGGCGGTGGGGCGGTCATTGCGCCCCGGAACAGAGTGTTGCTCCGCGAGGCGGGATTGGTGGTGAACCTCAC GGCTTCGCTTGAGGTGATCCTGTCTCGGCTGAAGGGCGATCGGGAGCGCCCGTTGTTGAAGAGTAACAACACTCCGGAGG CTCTGGCCGCGCTCATGACAGCTCGTGAGAACGCTTACGCCGATGCGGACTTGAGGATTGACACTGCCGGCAAAAGCGTG GAAGATGTGGTCACAGAAATCGCCACCTTTGTCCGGGAGCATCAATGA
Upstream 100 bases:
>100_bases GAGGCTGTGGTGGCCCTTGAACTGGCCAATGCCATGCTGGAGAAGTTCGGCGGTGATTCGCTCGGGGAAGTACGGCGCAA CTATGAGGGGTACCTGGAGT
Downstream 100 bases:
>100_bases CCATCGAGACACTGAGAGTAGAACTCGGTGAACGGAGCTACGATATTCGCGTCGGCTCGGCGATCATCGGCACGATCGGC GCCGTGTGTCGTGACGCTGT
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSVPSDGRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVERAGISINEIFERYGEQRFRELETEAIRSLGGVSGRV VATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLKGDRERPLLKSNNTPEALAALMTARENAYADADLRIDTAGKSV EDVVTEIATFVREHQ
Sequences:
>Translated_175_residues MSVPSDGRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVERAGISINEIFERYGEQRFRELETEAIRSLGGVSGRV VATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLKGDRERPLLKSNNTPEALAALMTARENAYADADLRIDTAGKSV EDVVTEIATFVREHQ >Mature_174_residues SVPSDGRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVERAGISINEIFERYGEQRFRELETEAIRSLGGVSGRVV ATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLKGDRERPLLKSNNTPEALAALMTARENAYADADLRIDTAGKSVE DVVTEIATFVREHQ
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=165, Percent_Identity=38.7878787878788, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1786587, Length=159, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=1e-15,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_GEOSL (Q74BL5)
Other databases:
- EMBL: AE017180 - RefSeq: NP_953075.1 - ProteinModelPortal: Q74BL5 - SMR: Q74BL5 - GeneID: 2686093 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU2026 - NMPDR: fig|243231.1.peg.2013 - TIGR: GSU2026 - HOGENOM: HBG335815 - OMA: VIYLRAN - ProtClustDB: CLSK828692 - BioCyc: GSUL243231:GSU_2026-MONOMER - BRENDA: 2.7.1.71 - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 18970; Mature: 18839
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 39-39 BINDING 63-63 BINDING 85-85 BINDING 123-123 BINDING 142-142
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPSDGRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVERAGISINEIFERYGEQ CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH RFRELETEAIRSLGGVSGRVVATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLKGD HHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCEEEEEECCEEEEEHHHHHHHHHHHCCC RERPLLKSNNTPEALAALMTARENAYADADLRIDTAGKSVEDVVTEIATFVREHQ CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SVPSDGRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVERAGISINEIFERYGEQ CCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH RFRELETEAIRSLGGVSGRVVATGGGAVIAPRNRVLLREAGLVVNLTASLEVILSRLKGD HHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCEEEEEECCEEEEEHHHHHHHHHHHCCC RERPLLKSNNTPEALAALMTARENAYADADLRIDTAGKSVEDVVTEIATFVREHQ CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA